EnhancerDB
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  3. vista51347[chr6:24799813-24800204]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51347[chr6:24799813-24800204]
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Tissue distribution of vista51347
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Transcription factor that possibly regulate vista51347[chr6:24799813-24800204]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 24799813 24799828 RFX5 JASPAR yes 70335303
chr6 24799824 24799845 IRF1 JASPAR yes 70335304
chr6 24799826 24799841 PRDM1 JASPAR yes 70335305
chr6 24799827 24799841 STAT1 JASPAR yes 70335306
chr6 24799831 24799852 ZNF263 JASPAR yes 70335307
chr6 24799857 24799876 REST JASPAR yes 70335308
chr6 24799858 24799877 REST JASPAR yes 70335309
chr6 24799868 24799878 MSC JASPAR yes 70335310
chr6 24799879 24799887 FOXC1 JASPAR yes 70335311
chr6 24799891 24799912 IRF1 JASPAR yes 70335312
chr6 24799894 24799908 SPIC JASPAR yes 70335313
chr6 24799930 24799935 H4TF1 TRANSFAC yes 70335314
chr6 24799947 24799962 SOX21 JASPAR yes 70335315
chr6 24799961 24799965 NFE TRANSFAC yes 70335316
chr6 24799964 24799975 ESRRA JASPAR yes 70335317
chr6 24799964 24799975 ESRRB JASPAR yes 70335318
chr6 24799967 24799984 RARA JASPAR yes 70335319
chr6 24799968 24799972 ESR1 TRANSFAC yes 70335320
chr6 24799972 24799977 MYB TRANSFAC yes 70335321
chr6 24799989 24800001 PKNOX1 JASPAR yes 70335322
chr6 24799989 24800001 PKNOX2 JASPAR yes 70335323
chr6 24799989 24800001 TGIF1 JASPAR yes 70335324
chr6 24799989 24800001 TGIF2 JASPAR yes 70335325
chr6 24799989 24800003 RXRB JASPAR yes 70335326
chr6 24799989 24800003 RXRG JASPAR yes 70335327
chr6 24799992 24799996 YY1 TRANSFAC yes 70335328
chr6 24800001 24800016 PRDM1 JASPAR yes 70335329
chr6 24800044 24800060 SOX8 JASPAR yes 70335330
chr6 24800046 24800067 ZNF263 JASPAR yes 70335331
chr6 24800062 24800077 RFX5 JASPAR yes 70335332
chr6 24800069 24800084 MAFK JASPAR yes 70335333
chr6 24800077 24800092 PRDM1 JASPAR yes 70335334
chr6 24800078 24800082 YY1 TRANSFAC yes 70335335
chr6 24800080 24800101 ZNF263 JASPAR yes 70335336
chr6 24800082 24800087 ETS2 TRANSFAC yes 70335337
chr6 24800091 24800105 SPI1 JASPAR yes 70335338
chr6 24800094 24800101 SPIB JASPAR yes 70335339
chr6 24800102 24800115 NR2F1 JASPAR yes 70335340
chr6 24800106 24800116 RORA JASPAR yes 70335341
chr6 24800106 24800120 NR2F1 JASPAR yes 70335342
chr6 24800143 24800149 LEF1 TRANSFAC yes 70335343
chr6 24800143 24800149 SOX10 JASPAR yes 70335344
chr6 24800148 24800169 IRF1 JASPAR yes 70335345
chr6 24800154 24800175 IRF1 JASPAR yes 70335346
chr6 24800159 24800180 IRF1 JASPAR yes 70335347
chr6 24800160 24800175 FOXP1 JASPAR yes 70335348
chr6 24800160 24800181 IRF1 JASPAR yes 70335349
chr6 24800161 24800176 STAT2 JASPAR yes 70335350
chr6 24800164 24800185 IRF1 JASPAR yes 70335351
chr6 24800165 24800180 FOXP1 JASPAR yes 70335352
chr6 24800165 24800186 IRF1 JASPAR yes 70335353
chr6 24800166 24800181 STAT2 JASPAR yes 70335354
chr6 24800169 24800190 IRF1 JASPAR yes 70335355
chr6 24800170 24800185 FOXP1 JASPAR yes 70335356
chr6 24800170 24800191 IRF1 JASPAR yes 70335357
chr6 24800171 24800186 PRDM1 JASPAR yes 70335358
chr6 24800171 24800192 IRF1 JASPAR yes 70335359
chr6 24800173 24800188 STAT2 JASPAR yes 70335360
chr6 24800174 24800188 STAT1 JASPAR yes 70335361
chr6 24800175 24800189 IRF7 JASPAR yes 70335362
chr6 24800175 24800196 IRF1 JASPAR yes 70335363
chr6 24800176 24800191 FOXP1 JASPAR yes 70335364
chr6 24800176 24800197 IRF1 JASPAR yes 70335365
chr6 24800177 24800192 PRDM1 JASPAR yes 70335366
chr6 24800177 24800198 IRF1 JASPAR yes 70335367
chr6 24800181 24800202 IRF1 JASPAR yes 70335368
chr6 24800182 24800197 FOXP1 JASPAR yes 70335369
chr6 24800182 24800203 IRF1 JASPAR yes 70335370
chr6 24800184 24800199 FOXP1 JASPAR yes 70335371
chr6 24800186 24800201 FOXP1 JASPAR yes 70335372
chr6 24800187 24800202 FOXP1 JASPAR yes 70335373
chr6 24800188 24800203 FOXP1 JASPAR yes 70335374
chr6 24800189 24800204 FOXP1 JASPAR yes 70335375
SNP sites on vista51347[chr6:24799813-24800204]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 24799822 rs115663861 C T
RFX5
8916301
chr6 24799858 rs80261858 A G
REST
8916302
chr6 24799863 rs149947313 TCTTTAAAGAGCTG T
REST
8916303
chr6 24799863 rs369066653 TCTTTAAAGAGCTG T
REST
8916304
chr6 24799888 rs559249196 A G no 8916305
chr6 24800160 rs9461071 C A
FOXP1 IRF1
8916306
chr6 24800187 rs11428882 C CT
FOXP1 IRF1 IRF7 PRDM1 STAT1 STAT2
8916307
chr6 24800187 rs398000981 C CT
FOXP1 IRF1 IRF7 PRDM1 STAT1 STAT2
8916308
Genes possibly regulated by vista51347[chr6:24799813-24800204]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 24705089 24721064 - C6orf62 ENSG00000112308.8 24721064 0.73 0.99 6207 21251
chr6 24775159 24786327 + GMNN ENSG00000112312.5 24775159 0.86 0.97 6208 75346
chr6 24797549 24799117 - RP3-369A17.5 ENSG00000260286.1 24799117 0.95 0.0 6209 99304
Expression level of Genes
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miRNAs possibly regulated by vista51347[chr6:24799813-24800204]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results