EnhancerDB
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  3. vista5135[chr1:219433064-219433395]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5135[chr1:219433064-219433395]
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Tissue distribution of vista5135
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Transcription factor that possibly regulate vista5135[chr1:219433064-219433395]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 219433087 219433099 POU3F2 JASPAR yes 118460122
chr1 219433097 219433107 NEUROG2 JASPAR yes 118460123
chr1 219433098 219433108 MAX JASPAR yes 118460124
chr1 219433104 219433116 E2F8 JASPAR yes 118460125
chr1 219433118 219433123 MYB TRANSFAC yes 118460126
chr1 219433125 219433131 TBP TRANSFAC yes 118460127
chr1 219433125 219433136 FOXC1 JASPAR yes 118460128
chr1 219433131 219433145 POU1F1 JASPAR yes 118460129
chr1 219433131 219433146 FOXP1 JASPAR yes 118460130
chr1 219433131 219433146 MEF2C JASPAR yes 118460131
chr1 219433132 219433147 MEF2A JASPAR yes 118460132
chr1 219433133 219433144 FOXB1 JASPAR yes 118460133
chr1 219433133 219433144 FOXC1 JASPAR yes 118460134
chr1 219433133 219433145 FOXC2 JASPAR yes 118460135
chr1 219433133 219433145 MEF2A JASPAR yes 118460136
chr1 219433133 219433145 MEF2B JASPAR yes 118460137
chr1 219433133 219433145 MEF2D JASPAR yes 118460138
chr1 219433134 219433144 MEF2A JASPAR yes 118460139
chr1 219433134 219433146 FOXI1 JASPAR yes 118460140
chr1 219433135 219433139 TEAD2 TRANSFAC yes 118460141
chr1 219433135 219433140 TBP TRANSFAC yes 118460142
chr1 219433135 219433141 TMF TRANSFAC yes 118460143
chr1 219433136 219433150 POU4F1 JASPAR yes 118460144
chr1 219433136 219433152 POU4F3 JASPAR yes 118460145
chr1 219433137 219433148 PHOX2A JASPAR yes 118460146
chr1 219433137 219433148 PROP1 JASPAR yes 118460147
chr1 219433139 219433153 POU4F1 JASPAR yes 118460148
chr1 219433144 219433159 FOXP1 JASPAR yes 118460149
chr1 219433147 219433168 IRF1 JASPAR yes 118460150
chr1 219433154 219433170 POU4F3 JASPAR yes 118460151
chr1 219433170 219433180 CEBPB JASPAR yes 118460152
chr1 219433170 219433180 CEBPG JASPAR yes 118460153
chr1 219433171 219433182 PHOX2A JASPAR yes 118460154
chr1 219433174 219433184 ALX3 JASPAR yes 118460155
chr1 219433174 219433184 GSX2 JASPAR yes 118460156
chr1 219433174 219433184 MIXL1 JASPAR yes 118460157
chr1 219433175 219433183 ISX JASPAR yes 118460158
chr1 219433175 219433183 LHX9 JASPAR yes 118460159
chr1 219433175 219433183 LMX1B JASPAR yes 118460160
chr1 219433175 219433183 PRRX1 JASPAR yes 118460161
chr1 219433175 219433183 RAX2 JASPAR yes 118460162
chr1 219433175 219433183 SHOX JASPAR yes 118460163
chr1 219433175 219433183 UNCX JASPAR yes 118460164
chr1 219433179 219433188 SRY JASPAR yes 118460165
chr1 219433183 219433189 SOX10 JASPAR yes 118460166
chr1 219433199 219433204 GATA2 JASPAR yes 118460167
chr1 219433208 219433212 YY1 TRANSFAC yes 118460168
chr1 219433209 219433224 MEF2A JASPAR yes 118460169
chr1 219433210 219433225 MEF2C JASPAR yes 118460170
chr1 219433213 219433217 YY1 TRANSFAC yes 118460171
chr1 219433222 219433227 MYB TRANSFAC yes 118460172
chr1 219433229 219433233 YY1 TRANSFAC yes 118460173
chr1 219433238 219433248 POU6F1 JASPAR yes 118460174
chr1 219433240 219433253 POU2F2 JASPAR yes 118460175
chr1 219433245 219433256 BATF JASPAR yes 118460176
chr1 219433264 219433270 JUN TRANSFAC yes 118460177
chr1 219433266 219433276 EMX1 JASPAR yes 118460178
chr1 219433266 219433276 GBX2 JASPAR yes 118460179
chr1 219433266 219433276 GSX1 JASPAR yes 118460180
chr1 219433266 219433276 GSX2 JASPAR yes 118460181
chr1 219433266 219433276 HOXB2 JASPAR yes 118460182
chr1 219433266 219433276 HOXB3 JASPAR yes 118460183
chr1 219433266 219433276 MEOX1 JASPAR yes 118460184
chr1 219433266 219433276 MEOX2 JASPAR yes 118460185
chr1 219433266 219433276 MIXL1 JASPAR yes 118460186
chr1 219433266 219433276 MNX1 JASPAR yes 118460187
chr1 219433266 219433277 HOXA10 JASPAR yes 118460188
chr1 219433267 219433275 LMX1A JASPAR yes 118460189
chr1 219433267 219433275 LMX1B JASPAR yes 118460190
chr1 219433267 219433275 NKX6-1 JASPAR yes 118460191
chr1 219433267 219433275 NKX6-2 JASPAR yes 118460192
chr1 219433267 219433275 PDX1 JASPAR yes 118460193
chr1 219433267 219433275 VAX1 JASPAR yes 118460194
chr1 219433267 219433275 VAX2 JASPAR yes 118460195
chr1 219433267 219433275 VSX1 JASPAR yes 118460196
chr1 219433267 219433277 HOXD13 JASPAR yes 118460197
chr1 219433278 219433294 SOX8 JASPAR yes 118460198
chr1 219433286 219433289 MYB TRANSFAC yes 118460199
chr1 219433301 219433310 SRY JASPAR yes 118460200
chr1 219433303 219433306 MYB TRANSFAC yes 118460201
chr1 219433320 219433330 POU6F2 JASPAR yes 118460202
chr1 219433321 219433331 GSX1 JASPAR yes 118460203
chr1 219433321 219433331 GSX2 JASPAR yes 118460204
chr1 219433321 219433332 HOXC13 JASPAR yes 118460205
chr1 219433322 219433330 NKX6-1 JASPAR yes 118460206
chr1 219433322 219433330 NKX6-2 JASPAR yes 118460207
chr1 219433322 219433332 HOXC10 JASPAR yes 118460208
chr1 219433322 219433332 HOXD13 JASPAR yes 118460209
chr1 219433324 219433328 YY1 TRANSFAC yes 118460210
chr1 219433342 219433355 POU3F3 JASPAR yes 118460211
chr1 219433343 219433355 POU3F2 JASPAR yes 118460212
chr1 219433369 219433378 SRY JASPAR yes 118460213
SNP sites on vista5135[chr1:219433064-219433395]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 219433147 rs12027049 T A
FOXP1 IRF1 MEF2A PHOX2A POU4F1 POU4F3 PROP1
953746
chr1 219433166 rs114680310 A G
IRF1 POU4F3
953747
chr1 219433282 rs10595235 ACT A
SOX8
953748
chr1 219433282 rs34553145 ACT A
SOX8
953749
chr1 219433333 rs573353826 C T no 953750
Genes possibly regulated by vista5135[chr1:219433064-219433395]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 219347186 219386207 + LYPLAL1 ENSG00000143353.7 219347186 0.76 0.99 1851 14122
Expression level of Genes
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miRNAs possibly regulated by vista5135[chr1:219433064-219433395]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results