EnhancerDB
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  3. vista51379[chr6:25303199-25303368]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51379[chr6:25303199-25303368]
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Tissue distribution of vista51379
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Transcription factor that possibly regulate vista51379[chr6:25303199-25303368]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 25303221 25303242 IRF1 JASPAR yes 70336990
chr6 25303221 25303242 IRF1 JASPAR yes 100843414
chr6 25303223 25303238 STAT2 JASPAR yes 70336991
chr6 25303223 25303238 STAT2 JASPAR yes 100843415
chr6 25303224 25303238 STAT1 JASPAR yes 70336992
chr6 25303224 25303238 STAT1 JASPAR yes 100843416
chr6 25303228 25303233 ETS2 TRANSFAC yes 70336993
chr6 25303228 25303233 ETS2 TRANSFAC yes 100843417
chr6 25303240 25303245 ATF1 TRANSFAC yes 70336994
chr6 25303240 25303245 ATF1 TRANSFAC yes 100843418
chr6 25303244 25303248 YY1 TRANSFAC yes 70336995
chr6 25303244 25303248 YY1 TRANSFAC yes 100843419
chr6 25303263 25303267 YY1 TRANSFAC yes 70336996
chr6 25303263 25303267 YY1 TRANSFAC yes 100843420
chr6 25303293 25303297 YY1 TRANSFAC yes 70336997
chr6 25303293 25303297 YY1 TRANSFAC yes 100843421
chr6 25303301 25303316 PRDM1 JASPAR yes 70336998
chr6 25303301 25303316 PRDM1 JASPAR yes 100843422
chr6 25303317 25303331 RXRB JASPAR yes 70336999
chr6 25303317 25303331 RXRB JASPAR yes 100843423
chr6 25303317 25303332 LEF1 JASPAR yes 70337000
chr6 25303317 25303332 LEF1 JASPAR yes 100843424
chr6 25303318 25303332 TCF7L2 JASPAR yes 70337001
chr6 25303318 25303332 TCF7L2 JASPAR yes 100843425
chr6 25303318 25303333 PRDM1 JASPAR yes 70337002
chr6 25303318 25303333 PRDM1 JASPAR yes 100843426
chr6 25303347 25303368 IRF1 JASPAR yes 70337003
chr6 25303347 25303368 IRF1 JASPAR yes 100843427
chr6 25303351 25303366 FOXP1 JASPAR yes 70337004
chr6 25303351 25303366 FOXP1 JASPAR yes 100843428
chr6 25303351 25303372 IRF1 JASPAR yes 70337005
chr6 25303351 25303372 IRF1 JASPAR yes 100843429
chr6 25303352 25303367 FOXP1 JASPAR yes 70337006
chr6 25303352 25303367 FOXP1 JASPAR yes 100843430
chr6 25303353 25303368 FOXP1 JASPAR yes 70337007
chr6 25303353 25303368 FOXP1 JASPAR yes 100843431
chr6 25303357 25303372 FOXP1 JASPAR yes 70337008
chr6 25303357 25303372 FOXP1 JASPAR yes 100843432
chr6 25303361 25303371 NFATC3 JASPAR yes 70337009
chr6 25303361 25303371 NFATC3 JASPAR yes 100843433
chr6 25303362 25303369 NFATC2 JASPAR yes 70337010
chr6 25303362 25303369 NFATC2 JASPAR yes 100843434
SNP sites on vista51379[chr6:25303199-25303368]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 25303282 rs73394120 G C,T no 8921340
chr6 25303335 rs191729333 G A no 8921341
chr6 25303353 rs71706432 CT C
FOXP1 IRF1
8921342
Genes possibly regulated by vista51379[chr6:25303199-25303368]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25279306 25620758 + LRRC16A ENSG00000079691.15 25279306 0.92 1.0 6211 76107
Expression level of Genes
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miRNAs possibly regulated by vista51379[chr6:25303199-25303368]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results