EnhancerDB
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  3. vista51380[chr6:25331178-25331378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51380[chr6:25331178-25331378]
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Tissue distribution of vista51380
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Transcription factor that possibly regulate vista51380[chr6:25331178-25331378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 25331167 25331178 PHOX2A JASPAR yes 70337011
chr6 25331167 25331178 PROP1 JASPAR yes 70337012
chr6 25331167 25331178 PHOX2A JASPAR yes 100846564
chr6 25331167 25331178 PROP1 JASPAR yes 100846565
chr6 25331185 25331200 STAT1 JASPAR yes 70337013
chr6 25331185 25331200 STAT1 JASPAR yes 100846566
chr6 25331187 25331198 STAT1 JASPAR yes 70337014
chr6 25331187 25331198 STAT3 JASPAR yes 70337015
chr6 25331187 25331198 STAT1 JASPAR yes 100846567
chr6 25331187 25331198 STAT3 JASPAR yes 100846568
chr6 25331192 25331206 JUN JASPAR yes 70337016
chr6 25331192 25331206 JUN JASPAR yes 100846569
chr6 25331196 25331207 FOS JASPAR yes 70337017
chr6 25331196 25331207 FOSL1 JASPAR yes 70337018
chr6 25331196 25331207 NFE2 JASPAR yes 70337019
chr6 25331196 25331207 FOS JASPAR yes 100846570
chr6 25331196 25331207 FOSL1 JASPAR yes 100846571
chr6 25331196 25331207 NFE2 JASPAR yes 100846572
chr6 25331198 25331204 JUN TRANSFAC yes 70337020
chr6 25331198 25331204 JUN TRANSFAC yes 100846573
chr6 25331203 25331217 FOXF2 JASPAR yes 70337021
chr6 25331203 25331217 FOXF2 JASPAR yes 100846574
chr6 25331204 25331212 FOXG1 JASPAR yes 70337022
chr6 25331204 25331212 FOXG1 JASPAR yes 100846575
chr6 25331235 25331250 FOXA1 JASPAR yes 70337023
chr6 25331235 25331250 FOXA1 JASPAR yes 100846576
chr6 25331236 25331251 FOXP1 JASPAR yes 70337024
chr6 25331236 25331251 FOXP1 JASPAR yes 100846577
chr6 25331237 25331249 FOXC2 JASPAR yes 70337025
chr6 25331237 25331249 FOXC2 JASPAR yes 100846578
chr6 25331238 25331249 FOXC1 JASPAR yes 70337026
chr6 25331238 25331249 FOXC1 JASPAR yes 100846579
chr6 25331239 25331250 FOXA1 JASPAR yes 70337027
chr6 25331239 25331250 FOXA1 JASPAR yes 100846580
chr6 25331247 25331251 TEAD2 TRANSFAC yes 70337028
chr6 25331247 25331251 TEAD2 TRANSFAC yes 100846581
chr6 25331251 25331270 RFX2 JASPAR yes 70337029
chr6 25331251 25331270 RFX2 JASPAR yes 100846582
chr6 25331255 25331271 RFX5 JASPAR yes 70337030
chr6 25331255 25331271 RFX5 JASPAR yes 100846583
chr6 25331293 25331303 ETV6 JASPAR yes 70337031
chr6 25331293 25331303 ETV6 JASPAR yes 100846584
chr6 25331293 25331304 ELF5 JASPAR yes 70337032
chr6 25331293 25331304 ELF5 JASPAR yes 100846585
chr6 25331293 25331305 EHF JASPAR yes 70337033
chr6 25331293 25331305 ELF1 JASPAR yes 70337034
chr6 25331293 25331305 ELF4 JASPAR yes 70337035
chr6 25331293 25331305 EHF JASPAR yes 100846586
chr6 25331293 25331305 ELF1 JASPAR yes 100846587
chr6 25331293 25331305 ELF4 JASPAR yes 100846588
chr6 25331294 25331301 SPI1 JASPAR yes 70337036
chr6 25331294 25331301 SPI1 JASPAR yes 100846589
chr6 25331294 25331302 EHF JASPAR yes 70337037
chr6 25331294 25331302 FEV JASPAR yes 70337038
chr6 25331294 25331302 EHF JASPAR yes 100846590
chr6 25331294 25331302 FEV JASPAR yes 100846591
chr6 25331326 25331332 NFE2 TRANSFAC yes 70337039
chr6 25331326 25331332 NFE2 TRANSFAC yes 100846592
chr6 25331334 25331342 EHF JASPAR yes 70337040
chr6 25331334 25331342 EHF JASPAR yes 100846593
chr6 25331335 25331342 SPI1 JASPAR yes 70337041
chr6 25331335 25331342 SPI1 JASPAR yes 100846594
chr6 25331347 25331352 MYB TRANSFAC yes 70337042
chr6 25331347 25331352 MYB TRANSFAC yes 100846595
chr6 25331353 25331358 GATA1 TRANSFAC yes 70337043
chr6 25331353 25331358 GATA1 TRANSFAC yes 100846596
SNP sites on vista51380[chr6:25331178-25331378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 25331208 rs150887441 T C
FOXF2 FOXG1
8921729
chr6 25331237 rs7769912 A G
FOXA1 FOXC2 FOXP1
8921730
chr6 25331300 rs34705887 C T
EHF ELF1 ELF4 ELF5 ETV6 FEV SPI1
8921731
chr6 25331308 rs116627513 A T no 8921732
chr6 25331312 rs183036433 A G,T no 8921733
Genes possibly regulated by vista51380[chr6:25331178-25331378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25279306 25620758 + LRRC16A ENSG00000079691.15 25279306 0.92 1.0 6211 48128
Expression level of Genes
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miRNAs possibly regulated by vista51380[chr6:25331178-25331378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results