EnhancerDB
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  3. vista51381[chr6:25352378-25352572]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51381[chr6:25352378-25352572]
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Tissue distribution of vista51381
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Transcription factor that possibly regulate vista51381[chr6:25352378-25352572]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 25352369 25352380 DMRT3 JASPAR yes 70337044
chr6 25352369 25352380 DMRT3 JASPAR yes 100849799
chr6 25352373 25352388 FOXP1 JASPAR yes 70337045
chr6 25352373 25352388 FOXP1 JASPAR yes 100849801
chr6 25352375 25352396 IRF1 JASPAR yes 70337046
chr6 25352375 25352396 IRF1 JASPAR yes 100849802
chr6 25352377 25352392 FOXP1 JASPAR yes 70337047
chr6 25352377 25352392 FOXP1 JASPAR yes 100849803
chr6 25352378 25352393 FOXP1 JASPAR yes 70337048
chr6 25352378 25352393 FOXP1 JASPAR yes 100849804
chr6 25352379 25352385 TBP TRANSFAC yes 70337049
chr6 25352379 25352385 TBP TRANSFAC yes 100849805
chr6 25352379 25352394 FOXP1 JASPAR yes 70337050
chr6 25352379 25352394 FOXP1 JASPAR yes 100849806
chr6 25352380 25352395 FOXP1 JASPAR yes 70337051
chr6 25352380 25352395 FOXP1 JASPAR yes 100849807
chr6 25352381 25352396 FOXP1 JASPAR yes 70337052
chr6 25352381 25352396 FOXP1 JASPAR yes 100849808
chr6 25352381 25352402 IRF1 JASPAR yes 70337053
chr6 25352381 25352402 IRF1 JASPAR yes 100849809
chr6 25352382 25352397 FOXP1 JASPAR yes 70337054
chr6 25352382 25352397 FOXP1 JASPAR yes 100849810
chr6 25352385 25352400 PRDM1 JASPAR yes 70337055
chr6 25352385 25352400 STAT2 JASPAR yes 70337056
chr6 25352385 25352400 PRDM1 JASPAR yes 100849811
chr6 25352385 25352400 STAT2 JASPAR yes 100849812
chr6 25352411 25352422 NFIL3 JASPAR yes 70337057
chr6 25352411 25352422 NFIL3 JASPAR yes 100849813
chr6 25352430 25352437 GATA3 TRANSFAC yes 70337058
chr6 25352430 25352437 GATA3 TRANSFAC yes 100849814
chr6 25352430 25352438 GATA5 JASPAR yes 70337059
chr6 25352430 25352438 GATA5 JASPAR yes 100849815
chr6 25352431 25352445 SPI1 JASPAR yes 70337060
chr6 25352431 25352445 SPI1 JASPAR yes 100849816
chr6 25352433 25352436 MYB TRANSFAC yes 70337061
chr6 25352433 25352436 MYB TRANSFAC yes 100849817
chr6 25352444 25352453 SOX9 JASPAR yes 70337062
chr6 25352444 25352453 SOX9 JASPAR yes 100849818
chr6 25352451 25352461 SP1 JASPAR yes 70337063
chr6 25352451 25352461 SP1 JASPAR yes 100849819
chr6 25352461 25352479 ESR1 JASPAR yes 70337064
chr6 25352461 25352479 ESR1 JASPAR yes 100849820
chr6 25352483 25352488 TFAP2A TRANSFAC yes 70337065
chr6 25352483 25352488 TFAP2A TRANSFAC yes 100849821
chr6 25352483 25352489 MZF1 JASPAR yes 70337066
chr6 25352483 25352489 MZF1 JASPAR yes 100849822
chr6 25352493 25352513 ESR1 JASPAR yes 70337067
chr6 25352493 25352513 ESR1 JASPAR yes 100849823
chr6 25352499 25352503 ESR1 TRANSFAC yes 70337068
chr6 25352499 25352503 ESR1 TRANSFAC yes 100849824
chr6 25352500 25352521 IRF1 JASPAR yes 70337069
chr6 25352500 25352521 IRF1 JASPAR yes 100849825
chr6 25352506 25352527 IRF1 JASPAR yes 70337070
chr6 25352506 25352527 IRF1 JASPAR yes 100849826
chr6 25352508 25352523 PRDM1 JASPAR yes 70337071
chr6 25352508 25352523 PRDM1 JASPAR yes 100849827
chr6 25352512 25352531 REST JASPAR yes 70337072
chr6 25352512 25352531 REST JASPAR yes 100849828
chr6 25352514 25352529 RUNX2 JASPAR yes 70337073
chr6 25352514 25352529 RUNX2 JASPAR yes 100849829
chr6 25352517 25352523 SOX10 JASPAR yes 70337074
chr6 25352517 25352523 SOX10 JASPAR yes 100849830
chr6 25352517 25352528 RUNX1 JASPAR yes 70337075
chr6 25352517 25352528 RUNX1 JASPAR yes 100849831
chr6 25352518 25352528 RUNX3 JASPAR yes 70337076
chr6 25352518 25352528 RUNX3 JASPAR yes 100849832
chr6 25352519 25352528 RUNX2 JASPAR yes 70337077
chr6 25352519 25352528 RUNX2 JASPAR yes 100849833
chr6 25352541 25352546 GATA2 JASPAR yes 70337078
chr6 25352541 25352546 GATA2 JASPAR yes 100849834
chr6 25352541 25352562 IRF1 JASPAR yes 70337079
chr6 25352541 25352562 IRF1 JASPAR yes 100849835
chr6 25352543 25352558 PRDM1 JASPAR yes 70337080
chr6 25352543 25352558 STAT2 JASPAR yes 70337081
chr6 25352543 25352558 PRDM1 JASPAR yes 100849836
chr6 25352543 25352558 STAT2 JASPAR yes 100849837
chr6 25352546 25352561 FOXP1 JASPAR yes 70337082
chr6 25352546 25352561 FOXP1 JASPAR yes 100849838
chr6 25352547 25352562 FOXP1 JASPAR yes 70337083
chr6 25352547 25352562 FOXP1 JASPAR yes 100849839
chr6 25352548 25352563 FOXP1 JASPAR yes 70337084
chr6 25352548 25352563 FOXP1 JASPAR yes 100849840
chr6 25352549 25352564 FOXP1 JASPAR yes 70337085
chr6 25352549 25352564 FOXP1 JASPAR yes 100849841
chr6 25352550 25352565 FOXP1 JASPAR yes 70337086
chr6 25352550 25352565 FOXP1 JASPAR yes 100849842
chr6 25352551 25352571 RREB1 JASPAR yes 70337087
chr6 25352551 25352571 RREB1 JASPAR yes 100849843
SNP sites on vista51381[chr6:25352378-25352572]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 25352380 rs71744522 TA T
DMRT3 FOXP1 IRF1 TBP
8922125
chr6 25352380 rs776243465 TA T
DMRT3 FOXP1 IRF1 TBP
8922126
chr6 25352418 rs75739979 C A
NFIL3
8922127
chr6 25352431 rs375344052 A G
GATA3 GATA5 SPI1
8922128
chr6 25352547 rs10713909 CT C
FOXP1 IRF1 PRDM1 STAT2
8922129
chr6 25352547 rs397747641 CT C
FOXP1 IRF1 PRDM1 STAT2
8922130
Genes possibly regulated by vista51381[chr6:25352378-25352572]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25279306 25620758 + LRRC16A ENSG00000079691.15 25279306 0.92 1.0 6211 26928
Expression level of Genes
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miRNAs possibly regulated by vista51381[chr6:25352378-25352572]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results