EnhancerDB
  1. Home
  2. Enhancers
  3. vista51394[chr6:25836224-25836451]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51394[chr6:25836224-25836451]
Back to top
Tissue distribution of vista51394
Back to top
Transcription factor that possibly regulate vista51394[chr6:25836224-25836451]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 25836243 25836247 LFA1 TRANSFAC yes 70337484
chr6 25836245 25836257 MEF2A JASPAR yes 70337485
chr6 25836245 25836257 MEF2B JASPAR yes 70337486
chr6 25836257 25836266 THAP1 JASPAR yes 70337487
chr6 25836260 25836264 LFA1 TRANSFAC yes 70337488
chr6 25836301 25836314 POU3F3 JASPAR yes 70337489
chr6 25836301 25836315 POU1F1 JASPAR yes 70337490
chr6 25836305 25836316 FOXH1 JASPAR yes 70337491
chr6 25836308 25836322 CREB3 JASPAR yes 70337492
chr6 25836309 25836323 XBP1 JASPAR yes 70337493
chr6 25836314 25836329 RFX5 JASPAR yes 70337494
chr6 25836346 25836352 ETS1 JASPAR yes 70337495
chr6 25836346 25836356 ELK1 JASPAR yes 70337496
chr6 25836352 25836367 RUNX2 JASPAR yes 70337497
chr6 25836362 25836377 HNF4A JASPAR yes 70337498
chr6 25836363 25836378 HNF4G JASPAR yes 70337499
chr6 25836370 25836385 NR2C2 JASPAR yes 70337500
chr6 25836373 25836386 EOMES JASPAR yes 70337501
chr6 25836375 25836385 TBR1 JASPAR yes 70337502
chr6 25836375 25836386 TBX20 JASPAR yes 70337503
chr6 25836375 25836386 TBX2 JASPAR yes 70337504
chr6 25836376 25836386 TBX21 JASPAR yes 70337505
chr6 25836377 25836385 MGA JASPAR yes 70337506
chr6 25836377 25836385 TBX15 JASPAR yes 70337507
chr6 25836377 25836385 TBX1 JASPAR yes 70337508
chr6 25836377 25836385 TBX4 JASPAR yes 70337509
chr6 25836377 25836385 TBX5 JASPAR yes 70337510
chr6 25836398 25836412 GATA2 JASPAR yes 70337511
chr6 25836400 25836406 GATA1 TRANSFAC yes 70337512
chr6 25836400 25836408 GATA5 JASPAR yes 70337513
chr6 25836438 25836448 TEAD1 JASPAR yes 70337514
chr6 25836438 25836448 TEAD4 JASPAR yes 70337515
chr6 25836439 25836447 TEAD3 JASPAR yes 70337516
SNP sites on vista51394[chr6:25836224-25836451]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 25836257 rs1165184 C G
MEF2A MEF2B THAP1
8924644
chr6 25836281 rs75629191 G A no 8924645
chr6 25836379 rs182614524 C T
EOMES MGA NR2C2 TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5
8924646
chr6 25836380 rs1165183 A G
EOMES MGA NR2C2 TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5
8924647
Genes possibly regulated by vista51394[chr6:25836224-25836451]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25754927 25781419 + SLC17A4 ENSG00000146039.6 25754927 0.96 0.95 6215 18703
chr6 25783125 25832287 - SLC17A1 ENSG00000124568.6 25832287 0.99 0.98 6216 96063
chr6 25833294 25882514 - SLC17A3 ENSG00000124564.13 25882514 0.96 1.0 6217 53937
chr6 25912982 25930946 - SLC17A2 ENSG00000112337.6 25930946 1.0 1.0 6218 5505
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51394[chr6:25836224-25836451]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results