EnhancerDB
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  3. vista51399[chr6:26025834-26026125]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51399[chr6:26025834-26026125]
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Tissue distribution of vista51399
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Transcription factor that possibly regulate vista51399[chr6:26025834-26026125]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539145
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539146
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539147
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539148
chr6 26025869 26026209 JUN UCSC Txn Factor no Conserved 108539149
chr6 26025877 26026207 EP300 UCSC Txn Factor no Conserved 108539150
chr6 26025882 26026240 JUND UCSC Txn Factor no Conserved 108539151
chr6 26025894 26026234 MAFK UCSC Txn Factor no Conserved 108539152
chr6 26025915 26026586 GATA1 UCSC Txn Factor no Conserved 108539153
chr6 26025915 26026586 GATA1 UCSC Txn Factor no Conserved 108539154
chr6 26025923 26026203 FOS UCSC Txn Factor no Conserved 108539155
chr6 26025944 26026179 JUNB UCSC Txn Factor no Conserved 108539156
chr6 26025961 26026096 MAFF UCSC Txn Factor no Conserved 108539157
chr6 26026055 26026164 NR2F2 UCSC Txn Factor no Conserved 108539158
chr6 26025866 26025887 IRF1 JASPAR yes 70337670
chr6 26025910 26025914 YY1 TRANSFAC yes 70337671
chr6 26025959 26025964 MYC TRANSFAC yes 70337672
chr6 26025970 26025974 YY1 TRANSFAC yes 70337673
chr6 26025983 26025992 SOX9 JASPAR yes 70337674
chr6 26025999 26026003 YY1 TRANSFAC yes 70337675
chr6 26026000 26026021 IRF1 JASPAR yes 70337676
chr6 26026002 26026017 STAT2 JASPAR yes 70337677
chr6 26026003 26026017 STAT1 JASPAR yes 70337678
chr6 26026004 26026016 IRF1 JASPAR yes 70337679
chr6 26026004 26026018 IRF7 JASPAR yes 70337680
chr6 26026004 26026018 IRF8 JASPAR yes 70337681
chr6 26026004 26026019 IRF9 JASPAR yes 70337682
chr6 26026018 26026024 YY1 JASPAR yes 70337683
chr6 26026028 26026046 MAFF JASPAR yes 70337684
chr6 26026029 26026044 MAFK JASPAR yes 70337685
chr6 26026033 26026044 NRL JASPAR yes 70337686
chr6 26026038 26026042 YY1 TRANSFAC yes 70337687
chr6 26026042 26026046 YY1 TRANSFAC yes 70337688
chr6 26026046 26026057 NRL JASPAR yes 70337689
chr6 26026050 26026064 JUN JASPAR yes 70337690
chr6 26026052 26026063 BATF JASPAR yes 70337691
chr6 26026053 26026064 FOSL2 JASPAR yes 70337692
chr6 26026053 26026064 JUNB JASPAR yes 70337693
chr6 26026054 26026065 FOS JASPAR yes 70337694
chr6 26026054 26026065 FOSL1 JASPAR yes 70337695
chr6 26026054 26026065 JUND JASPAR yes 70337696
chr6 26026054 26026065 NFE2 JASPAR yes 70337697
chr6 26026055 26026064 JDP2 JASPAR yes 70337698
chr6 26026055 26026066 FOSL2 JASPAR yes 70337699
chr6 26026055 26026066 JUNB JASPAR yes 70337700
chr6 26026055 26026069 JUN JASPAR yes 70337701
chr6 26026059 26026069 TBX21 JASPAR yes 70337702
chr6 26026064 26026078 GATA2 JASPAR yes 70337703
chr6 26026065 26026069 YY1 TRANSFAC yes 70337704
chr6 26026068 26026076 GATA3 JASPAR yes 70337705
chr6 26026083 26026097 RXRB JASPAR yes 70337706
chr6 26026083 26026097 RXRG JASPAR yes 70337707
chr6 26026083 26026098 NR2C2 JASPAR yes 70337708
SNP sites on vista51399[chr6:26025834-26026125]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26025864 rs116293286 G A
POLR2A
8925434
chr6 26025965 rs534499831 G A
EP300 FOS GATA1 JUN JUNB JUND MAFF MAFK POLR2A
8925435
Genes possibly regulated by vista51399[chr6:26025834-26026125]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25912982 25930946 - SLC17A2 ENSG00000112337.6 25930946 1.0 1.0 6218 5112
chr6 25963030 25987384 + TRIM38 ENSG00000112343.8 25963030 0.69 1.0 6219 37196
chr6 26017260 26018040 - HIST1H1A ENSG00000124610.3 26018040 0.93 1.0 6220 92206
chr6 26020718 26021186 + HIST1H3A ENSG00000198366.5 26020718 0.95 0.97 6221 94884
chr6 26021907 26022278 + HIST1H4A ENSG00000196176.7 26021907 0.92 0.84 6222 96073
chr6 26027124 26027480 - HIST1H4B ENSG00000124529.3 26027480 0.9 0.87 6223 98645
chr6 26031817 26032288 - HIST1H3B ENSG00000124693.2 26032288 0.91 0.86 6224 93837
chr6 26033320 26033796 - HIST1H2AB ENSG00000137259.2 26033796 0.89 0.87 6225 92329
chr6 26043455 26043885 - HIST1H2BB ENSG00000196226.2 26043885 0.92 0.93 6226 82240
chr6 26045639 26046097 + HIST1H3C ENSG00000196532.4 26045639 0.96 0.94 6227 80486
chr6 26055968 26056699 - HIST1H1C ENSG00000187837.2 26056699 0.91 0.86 6228 69426
chr6 26087509 26098571 + HFE ENSG00000010704.14 26087509 0.74 1.0 6229 38616
chr6 26104104 26104518 + HIST1H4C ENSG00000197061.3 26104104 0.98 0.92 6230 22021
chr6 26107640 26108364 - HIST1H1T ENSG00000187475.4 26108364 0.93 0.96 6231 17761
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 1971
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 1752
Expression level of Genes
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miRNAs possibly regulated by vista51399[chr6:26025834-26026125]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results