EnhancerDB
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  3. vista51400[chr6:26026306-26026795]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51400[chr6:26026306-26026795]
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Tissue distribution of vista51400
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Transcription factor that possibly regulate vista51400[chr6:26026306-26026795]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539145
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539146
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539147
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539148
chr6 26025915 26026586 GATA1 UCSC Txn Factor no Conserved 108539153
chr6 26025915 26026586 GATA1 UCSC Txn Factor no Conserved 108539154
chr6 26026427 26026797 JUN UCSC Txn Factor no Conserved 108539159
chr6 26026448 26027748 ATF2 UCSC Txn Factor no Conserved 108539160
chr6 26026457 26026793 JUND UCSC Txn Factor no Conserved 108539161
chr6 26026466 26026876 CTCF UCSC Txn Factor no Conserved 108539162
chr6 26026476 26027700 KDM5B UCSC Txn Factor no Conserved 108539163
chr6 26026501 26027731 SIN3AK20 UCSC Txn Factor no Conserved 108539164
chr6 26026515 26026771 ATF1 UCSC Txn Factor no Conserved 108539165
chr6 26026550 26026831 RAD21 UCSC Txn Factor no Conserved 108539166
chr6 26026605 26027666 MTA3 UCSC Txn Factor no Conserved 108539167
chr6 26026634 26027690 PML UCSC Txn Factor no Conserved 108539168
chr6 26026306 26026317 PHOX2A JASPAR yes 70337709
chr6 26026361 26026368 MEIS1 JASPAR yes 70337710
chr6 26026361 26026369 MEIS2 JASPAR yes 70337711
chr6 26026361 26026369 MEIS3 JASPAR yes 70337712
chr6 26026396 26026407 NFIL3 JASPAR yes 70337713
chr6 26026397 26026410 ATF4 JASPAR yes 70337714
chr6 26026413 26026425 YY1 JASPAR yes 70337715
chr6 26026467 26026479 MEF2A JASPAR yes 70337716
chr6 26026467 26026479 MEF2D JASPAR yes 70337717
chr6 26026468 26026478 MEF2A JASPAR yes 70337718
chr6 26026468 26026479 FOXB1 JASPAR yes 70337719
chr6 26026468 26026479 FOXC1 JASPAR yes 70337720
chr6 26026469 26026473 YY1 TRANSFAC yes 70337721
chr6 26026473 26026477 TEAD2 TRANSFAC yes 70337722
chr6 26026473 26026478 TBP TRANSFAC yes 70337723
chr6 26026473 26026479 TFIID TRANSFAC yes 70337724
chr6 26026497 26026506 NKX3-2 JASPAR yes 70337725
chr6 26026503 26026513 NFKB1 JASPAR yes 70337726
chr6 26026536 26026547 NFKB1 JASPAR yes 70337727
chr6 26026544 26026559 TFAP2A JASPAR yes 70337728
chr6 26026554 26026569 MEF2C JASPAR yes 70337729
chr6 26026555 26026570 MEF2A JASPAR yes 70337730
chr6 26026556 26026568 MEF2D JASPAR yes 70337731
chr6 26026578 26026581 MYB TRANSFAC yes 70337732
chr6 26026600 26026610 MZF1 JASPAR yes 70337733
chr6 26026606 26026621 JUND JASPAR yes 70337734
chr6 26026607 26026620 JUN JASPAR yes 70337735
chr6 26026608 26026622 ATF7 JASPAR yes 70337736
chr6 26026608 26026622 BATF3 JASPAR yes 70337737
chr6 26026609 26026621 JDP2 JASPAR yes 70337738
chr6 26026609 26026624 JUND JASPAR yes 70337739
chr6 26026610 26026623 JUN JASPAR yes 70337740
chr6 26026611 26026616 ATF1 TRANSFAC yes 70337741
chr6 26026611 26026619 CREB1 JASPAR yes 70337742
chr6 26026612 26026624 CREB1 JASPAR yes 70337743
chr6 26026613 26026618 ATF1 TRANSFAC yes 70337744
chr6 26026618 26026633 ZIC3 JASPAR yes 70337745
chr6 26026619 26026633 ZIC1 JASPAR yes 70337746
chr6 26026638 26026659 IRF1 JASPAR yes 70337747
chr6 26026643 26026649 HiNF-A TRANSFAC yes 70337748
chr6 26026669 26026688 CTCF JASPAR yes 70337749
chr6 26026670 26026685 ZIC3 JASPAR yes 70337750
chr6 26026670 26026685 ZIC4 JASPAR yes 70337751
chr6 26026671 26026685 ZIC1 JASPAR yes 70337752
chr6 26026678 26026685 SP1 TRANSFAC yes 70337753
chr6 26026680 26026685 SP1 TRANSFAC yes 70337754
chr6 26026694 26026703 SNAI2 JASPAR yes 70337755
chr6 26026694 26026704 FIGLA JASPAR yes 70337756
chr6 26026694 26026704 ID4 JASPAR yes 70337757
chr6 26026694 26026704 MSC JASPAR yes 70337758
chr6 26026694 26026704 TCF3 JASPAR yes 70337759
chr6 26026694 26026704 TCF4 JASPAR yes 70337760
chr6 26026696 26026715 RFX2 JASPAR yes 70337761
chr6 26026697 26026705 MGA JASPAR yes 70337762
chr6 26026697 26026705 TBX15 JASPAR yes 70337763
chr6 26026697 26026705 TBX1 JASPAR yes 70337764
chr6 26026697 26026705 TBX4 JASPAR yes 70337765
chr6 26026697 26026705 TBX5 JASPAR yes 70337766
chr6 26026698 26026713 RFX5 JASPAR yes 70337767
chr6 26026700 26026716 RFX4 JASPAR yes 70337768
chr6 26026700 26026716 RFX5 JASPAR yes 70337769
chr6 26026708 26026713 ETS2 TRANSFAC yes 70337770
chr6 26026721 26026731 MSC JASPAR yes 70337771
chr6 26026726 26026737 NRL JASPAR yes 70337772
chr6 26026733 26026738 ATF1 TRANSFAC yes 70337773
chr6 26026752 26026767 FOXP1 JASPAR yes 70337774
chr6 26026755 26026766 FOXP2 JASPAR yes 70337775
chr6 26026756 26026764 FOXO3 JASPAR yes 70337776
chr6 26026775 26026779 YY1 TRANSFAC yes 70337777
chr6 26026779 26026787 RHOXF1 JASPAR yes 70337778
chr6 26026782 26026788 ZNF354C JASPAR yes 70337779
SNP sites on vista51400[chr6:26026306-26026795]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26026392 rs79216396 T G
GATA1 POLR2A
8925437
chr6 26026599 rs2032449 G C
ATF1 ATF2 CTCF JUN JUND KDM5B POLR2A RAD21 SIN3AK20
8925438
chr6 26026665 rs150443498 T C
ATF1 ATF2 CTCF JUN JUND KDM5B MTA3 PML POLR2A RAD21 SIN3AK20
8925439
chr6 26026738 rs545159814 G A
ATF1 ATF2 CTCF JUN JUND KDM5B MTA3 PML POLR2A RAD21 SIN3AK20
8925440
chr6 26026794 rs75715888 C G
ATF2 CTCF JUN KDM5B MTA3 PML POLR2A RAD21 SIN3AK20
8925441
Genes possibly regulated by vista51400[chr6:26026306-26026795]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25912982 25930946 - SLC17A2 ENSG00000112337.6 25930946 1.0 1.0 6218 4640
chr6 25963030 25987384 + TRIM38 ENSG00000112343.8 25963030 0.69 1.0 6219 36724
chr6 26017260 26018040 - HIST1H1A ENSG00000124610.3 26018040 0.93 1.0 6220 91734
chr6 26020718 26021186 + HIST1H3A ENSG00000198366.5 26020718 0.95 0.97 6221 94412
chr6 26021907 26022278 + HIST1H4A ENSG00000196176.7 26021907 0.92 0.84 6222 95601
chr6 26027124 26027480 - HIST1H4B ENSG00000124529.3 26027480 0.9 0.87 6223 99315
chr6 26031817 26032288 - HIST1H3B ENSG00000124693.2 26032288 0.91 0.86 6224 94507
chr6 26033320 26033796 - HIST1H2AB ENSG00000137259.2 26033796 0.89 0.87 6225 92999
chr6 26043455 26043885 - HIST1H2BB ENSG00000196226.2 26043885 0.92 0.93 6226 82910
chr6 26045639 26046097 + HIST1H3C ENSG00000196532.4 26045639 0.96 0.94 6227 81156
chr6 26055968 26056699 - HIST1H1C ENSG00000187837.2 26056699 0.91 0.86 6228 70096
chr6 26087509 26098571 + HFE ENSG00000010704.14 26087509 0.74 1.0 6229 39286
chr6 26104104 26104518 + HIST1H4C ENSG00000197061.3 26104104 0.98 0.92 6230 22691
chr6 26107640 26108364 - HIST1H1T ENSG00000187475.4 26108364 0.93 0.96 6231 18431
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 2641
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 2422
Expression level of Genes
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miRNAs possibly regulated by vista51400[chr6:26026306-26026795]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results