EnhancerDB
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  3. vista51401[chr6:26029019-26029363]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51401[chr6:26029019-26029363]
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Tissue distribution of vista51401
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Transcription factor that possibly regulate vista51401[chr6:26029019-26029363]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539145
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539146
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539147
chr6 26025216 26034413 POLR2A UCSC Txn Factor no Conserved 108539148
chr6 26029019 26029029 REL JASPAR yes 70337780
chr6 26029026 26029041 MYBL2 JASPAR yes 70337781
chr6 26029094 26029105 FOXP2 JASPAR yes 70337782
chr6 26029096 26029107 FOXA1 JASPAR yes 70337783
chr6 26029096 26029107 FOXH1 JASPAR yes 70337784
chr6 26029116 26029121 SP1 TRANSFAC yes 70337785
chr6 26029117 26029122 SP1 TRANSFAC yes 70337786
chr6 26029153 26029163 SP1 JASPAR yes 70337787
chr6 26029156 26029161 SP1 TRANSFAC yes 70337788
chr6 26029160 26029164 H4TF2 TRANSFAC yes 70337789
chr6 26029165 26029175 HOXA13 JASPAR yes 70337790
chr6 26029165 26029175 HOXB13 JASPAR yes 70337791
chr6 26029165 26029175 HOXD13 JASPAR yes 70337792
chr6 26029165 26029176 HOXC13 JASPAR yes 70337793
chr6 26029169 26029173 TEAD2 TRANSFAC yes 70337794
chr6 26029183 26029189 GATA3 JASPAR yes 70337795
chr6 26029187 26029197 NFATC3 JASPAR yes 70337796
chr6 26029189 26029196 NFATC2 JASPAR yes 70337797
chr6 26029227 26029242 NR2C2 JASPAR yes 70337798
chr6 26029231 26029236 SP1 TRANSFAC yes 70337799
chr6 26029233 26029246 NR2F1 JASPAR yes 70337800
chr6 26029237 26029241 ESR1 TRANSFAC yes 70337801
chr6 26029245 26029259 PLAG1 JASPAR yes 70337802
chr6 26029248 26029263 ZIC3 JASPAR yes 70337803
chr6 26029248 26029263 ZIC4 JASPAR yes 70337804
chr6 26029249 26029263 ZIC1 JASPAR yes 70337805
chr6 26029264 26029275 FOSL1 JASPAR yes 70337806
chr6 26029266 26029273 JUN TRANSFAC yes 70337807
chr6 26029267 26029287 ESR1 JASPAR yes 70337808
chr6 26029273 26029294 ZNF263 JASPAR yes 70337809
chr6 26029287 26029292 ETS2 TRANSFAC yes 70337810
chr6 26029287 26029297 TEAD4 JASPAR yes 70337811
chr6 26029289 26029299 RELA JASPAR yes 70337812
chr6 26029293 26029313 TBX19 JASPAR yes 70337813
chr6 26029300 26029314 BATF3 JASPAR yes 70337814
chr6 26029302 26029315 DUXA JASPAR yes 70337815
chr6 26029302 26029320 MAFF JASPAR yes 70337816
chr6 26029303 26029314 DUX4 JASPAR yes 70337817
chr6 26029303 26029318 MAFK JASPAR yes 70337818
chr6 26029305 26029318 JUN JASPAR yes 70337819
chr6 26029327 26029345 ESR1 JASPAR yes 70337820
chr6 26029329 26029333 LFA1 TRANSFAC yes 70337821
chr6 26029329 26029350 IRF1 JASPAR yes 70337822
chr6 26029331 26029346 PRDM1 JASPAR yes 70337823
chr6 26029332 26029336 YY1 TRANSFAC yes 70337824
chr6 26029332 26029346 STAT1 JASPAR yes 70337825
chr6 26029333 26029345 IRF1 JASPAR yes 70337826
SNP sites on vista51401[chr6:26029019-26029363]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26029029 rs73387440 C G
MYBL2 POLR2A REL
8925491
chr6 26029047 rs77865170 C G,T
POLR2A
8925492
chr6 26029049 rs115911719 C T
POLR2A
8925493
chr6 26029053 rs151102681 C T
POLR2A
8925494
chr6 26029214 rs142513192 T C
POLR2A
8925495
chr6 26029299 rs143686533 CA C
POLR2A RELA TBX19
8925496
chr6 26029334 rs113828149 A G
ESR1 IRF1 POLR2A PRDM1 STAT1 YY1
8925497
chr6 26029350 rs543462014 T G
IRF1 POLR2A
8925498
Genes possibly regulated by vista51401[chr6:26029019-26029363]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 25912982 25930946 - SLC17A2 ENSG00000112337.6 25930946 1.0 1.0 6218 1927
chr6 25963030 25987384 + TRIM38 ENSG00000112343.8 25963030 0.69 1.0 6219 34011
chr6 26017260 26018040 - HIST1H1A ENSG00000124610.3 26018040 0.93 1.0 6220 89021
chr6 26020718 26021186 + HIST1H3A ENSG00000198366.5 26020718 0.95 0.97 6221 91699
chr6 26021907 26022278 + HIST1H4A ENSG00000196176.7 26021907 0.92 0.84 6222 92888
chr6 26027124 26027480 - HIST1H4B ENSG00000124529.3 26027480 0.9 0.87 6223 98461
chr6 26031817 26032288 - HIST1H3B ENSG00000124693.2 26032288 0.91 0.86 6224 97075
chr6 26033320 26033796 - HIST1H2AB ENSG00000137259.2 26033796 0.89 0.87 6225 95567
chr6 26043455 26043885 - HIST1H2BB ENSG00000196226.2 26043885 0.92 0.93 6226 85478
chr6 26045639 26046097 + HIST1H3C ENSG00000196532.4 26045639 0.96 0.94 6227 83724
chr6 26055968 26056699 - HIST1H1C ENSG00000187837.2 26056699 0.91 0.86 6228 72664
chr6 26087509 26098571 + HFE ENSG00000010704.14 26087509 0.74 1.0 6229 41854
chr6 26104104 26104518 + HIST1H4C ENSG00000197061.3 26104104 0.98 0.92 6230 25259
chr6 26107640 26108364 - HIST1H1T ENSG00000187475.4 26108364 0.93 0.96 6231 20999
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 5209
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 4990
Expression level of Genes
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miRNAs possibly regulated by vista51401[chr6:26029019-26029363]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results