EnhancerDB
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  3. vista51404[chr6:26143490-26143769]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51404[chr6:26143490-26143769]
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Tissue distribution of vista51404
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Transcription factor that possibly regulate vista51404[chr6:26143490-26143769]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26143493 26143507 GATA2 JASPAR yes 70337912
chr6 26143497 26143505 GATA3 JASPAR yes 70337913
chr6 26143498 26143513 RUNX2 JASPAR yes 70337914
chr6 26143510 26143519 THAP1 JASPAR yes 70337915
chr6 26143539 26143554 LEF1 JASPAR yes 70337916
chr6 26143540 26143554 TCF7L2 JASPAR yes 70337917
chr6 26143542 26143555 ATF4 JASPAR yes 70337918
chr6 26143547 26143562 SCRT1 JASPAR yes 70337919
chr6 26143548 26143558 FIGLA JASPAR yes 70337920
chr6 26143548 26143558 SREBF2 JASPAR yes 70337921
chr6 26143548 26143558 TFAP4 JASPAR yes 70337922
chr6 26143549 26143562 SCRT2 JASPAR yes 70337923
chr6 26143550 26143555 USF2 TRANSFAC yes 70337924
chr6 26143551 26143557 PTF TRANSFAC yes 70337925
chr6 26143552 26143563 FOXP2 JASPAR yes 70337926
chr6 26143555 26143563 GATA3 JASPAR yes 70337927
chr6 26143557 26143568 PHOX2A JASPAR yes 70337928
chr6 26143557 26143568 PROP1 JASPAR yes 70337929
chr6 26143560 26143570 ALX3 JASPAR yes 70337930
chr6 26143560 26143570 EMX1 JASPAR yes 70337931
chr6 26143560 26143570 EMX2 JASPAR yes 70337932
chr6 26143560 26143570 ESX1 JASPAR yes 70337933
chr6 26143560 26143570 EVX1 JASPAR yes 70337934
chr6 26143560 26143570 EVX2 JASPAR yes 70337935
chr6 26143560 26143570 GBX2 JASPAR yes 70337936
chr6 26143560 26143570 GSX1 JASPAR yes 70337937
chr6 26143560 26143570 HOXA2 JASPAR yes 70337938
chr6 26143560 26143570 HOXB2 JASPAR yes 70337939
chr6 26143560 26143570 HOXB3 JASPAR yes 70337940
chr6 26143560 26143570 LHX2 JASPAR yes 70337941
chr6 26143560 26143570 LHX6 JASPAR yes 70337942
chr6 26143560 26143570 MEOX1 JASPAR yes 70337943
chr6 26143560 26143570 MEOX2 JASPAR yes 70337944
chr6 26143560 26143570 MIXL1 JASPAR yes 70337945
chr6 26143560 26143570 MNX1 JASPAR yes 70337946
chr6 26143560 26143570 NOTO JASPAR yes 70337947
chr6 26143561 26143569 DLX6 JASPAR yes 70337948
chr6 26143561 26143569 EN1 JASPAR yes 70337949
chr6 26143561 26143569 LBX1 JASPAR yes 70337950
chr6 26143561 26143569 PAX4 JASPAR yes 70337951
chr6 26143561 26143569 PDX1 JASPAR yes 70337952
chr6 26143561 26143569 VAX1 JASPAR yes 70337953
chr6 26143561 26143569 VAX2 JASPAR yes 70337954
chr6 26143561 26143569 VSX1 JASPAR yes 70337955
chr6 26143561 26143569 VSX2 JASPAR yes 70337956
chr6 26143572 26143576 YY1 TRANSFAC yes 70337957
chr6 26143579 26143584 ETS2 TRANSFAC yes 70337958
chr6 26143636 26143641 MYB TRANSFAC yes 70337959
chr6 26143642 26143657 HNF4G JASPAR yes 70337960
chr6 26143649 26143660 NFKB1 JASPAR yes 70337961
chr6 26143681 26143697 SOX8 JASPAR yes 70337962
chr6 26143720 26143724 H4TF2 TRANSFAC yes 70337963
chr6 26143730 26143741 STAT3 JASPAR yes 70337964
chr6 26143741 26143761 PPARG JASPAR yes 70337965
chr6 26143750 26143754 ESR1 TRANSFAC yes 70337966
chr6 26143761 26143768 PEA3 TRANSFAC yes 70337967
SNP sites on vista51404[chr6:26143490-26143769]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26143498 rs117761278 G C
GATA2 GATA3 RUNX2
8926328
Genes possibly regulated by vista51404[chr6:26143490-26143769]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26043455 26043885 - HIST1H2BB ENSG00000196226.2 26043885 0.92 0.93 6226 395
chr6 26045639 26046097 + HIST1H3C ENSG00000196532.4 26045639 0.96 0.94 6227 2149
chr6 26055968 26056699 - HIST1H1C ENSG00000187837.2 26056699 0.91 0.86 6228 13209
chr6 26087509 26098571 + HFE ENSG00000010704.14 26087509 0.74 1.0 6229 44019
chr6 26104104 26104518 + HIST1H4C ENSG00000197061.3 26104104 0.98 0.92 6230 60614
chr6 26107640 26108364 - HIST1H1T ENSG00000187475.4 26108364 0.93 0.96 6231 64874
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 80664
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 80883
chr6 26156559 26157343 + HIST1H1E ENSG00000168298.4 26156559 0.97 0.89 6234 87210
chr6 26158349 26171577 + HIST1H2BD ENSG00000158373.7 26158349 0.92 0.84 6235 85420
chr6 26183958 26184454 + HIST1H2BE ENSG00000197697.3 26183958 0.86 0.96 6236 59811
chr6 26188938 26189304 - HIST1H4D ENSG00000188987.2 26189304 0.9 0.96 6237 54465
chr6 26197068 26199521 - HIST1H3D ENSG00000197409.6 26199521 0.91 0.9 6238 44248
chr6 26199079 26199471 - HIST1H2AD ENSG00000196866.2 26199471 0.96 0.93 6239 44298
chr6 26199748 26200942 + HIST1H2BF ENSG00000197846.3 26199748 0.9 0.92 6240 44021
chr6 26204858 26206266 + HIST1H4E ENSG00000198518.5 26204858 0.91 0.82 6241 38911
chr6 26216428 26216872 - HIST1H2BG ENSG00000187990.4 26216872 0.97 0.86 6242 26897
chr6 26217165 26217711 + HIST1H2AE ENSG00000168274.3 26217165 0.88 0.83 6243 26604
chr6 26225383 26225844 + HIST1H3E ENSG00000196966.3 26225383 0.97 0.98 6244 18386
chr6 26234440 26235216 - HIST1H1D ENSG00000124575.5 26235216 0.99 0.91 6245 8553
chr6 26240561 26240976 + HIST1H4F ENSG00000198327.3 26240561 0.92 1.0 6246 3208
Expression level of Genes
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miRNAs possibly regulated by vista51404[chr6:26143490-26143769]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results