EnhancerDB
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  3. vista51406[chr6:26219063-26219301]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51406[chr6:26219063-26219301]
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Tissue distribution of vista51406
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Transcription factor that possibly regulate vista51406[chr6:26219063-26219301]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26219063 26219078 FOXP1 JASPAR yes 70337969
chr6 26219064 26219079 FOXP1 JASPAR yes 70337970
chr6 26219064 26219085 IRF1 JASPAR yes 70337971
chr6 26219065 26219080 FOXP1 JASPAR yes 70337972
chr6 26219065 26219086 IRF1 JASPAR yes 70337973
chr6 26219066 26219081 FOXP1 JASPAR yes 70337974
chr6 26219068 26219083 FOXP1 JASPAR yes 70337975
chr6 26219069 26219084 STAT2 JASPAR yes 70337976
chr6 26219070 26219085 FOXP1 JASPAR yes 70337977
chr6 26219070 26219091 IRF1 JASPAR yes 70337978
chr6 26219071 26219092 IRF1 JASPAR yes 70337979
chr6 26219072 26219084 FOXC2 JASPAR yes 70337980
chr6 26219072 26219092 RREB1 JASPAR yes 70337981
chr6 26219073 26219084 FOXP2 JASPAR yes 70337982
chr6 26219077 26219097 RREB1 JASPAR yes 70337983
chr6 26219107 26219117 HOXC10 JASPAR yes 70337984
chr6 26219107 26219117 HOXD11 JASPAR yes 70337985
chr6 26219107 26219117 HOXD13 JASPAR yes 70337986
chr6 26219107 26219118 HOXA10 JASPAR yes 70337987
chr6 26219107 26219118 HOXC11 JASPAR yes 70337988
chr6 26219107 26219118 HOXC12 JASPAR yes 70337989
chr6 26219107 26219118 HOXC13 JASPAR yes 70337990
chr6 26219107 26219118 HOXD12 JASPAR yes 70337991
chr6 26219108 26219117 CDX1 JASPAR yes 70337992
chr6 26219108 26219119 CDX2 JASPAR yes 70337993
chr6 26219112 26219126 RORA JASPAR yes 70337994
chr6 26219113 26219123 RORA JASPAR yes 70337995
chr6 26219124 26219128 TEAD2 TRANSFAC yes 70337996
chr6 26219124 26219129 TBP TRANSFAC yes 70337997
chr6 26219124 26219130 TMF TRANSFAC yes 70337998
chr6 26219148 26219156 BARX1 JASPAR yes 70337999
chr6 26219148 26219164 POU4F2 JASPAR yes 70338000
chr6 26219148 26219164 POU4F3 JASPAR yes 70338001
chr6 26219149 26219159 PAX3 JASPAR yes 70338002
chr6 26219149 26219159 PAX7 JASPAR yes 70338003
chr6 26219150 26219164 POU4F1 JASPAR yes 70338004
chr6 26219150 26219165 HNF1A JASPAR yes 70338005
chr6 26219151 26219161 LHX6 JASPAR yes 70338006
chr6 26219151 26219161 MNX1 JASPAR yes 70338007
chr6 26219151 26219161 POU6F1 JASPAR yes 70338008
chr6 26219151 26219164 HNF1B JASPAR yes 70338009
chr6 26219152 26219160 LMX1A JASPAR yes 70338010
chr6 26219152 26219160 LMX1B JASPAR yes 70338011
chr6 26219152 26219160 NKX6-1 JASPAR yes 70338012
chr6 26219152 26219160 NKX6-2 JASPAR yes 70338013
chr6 26219152 26219160 VAX1 JASPAR yes 70338014
chr6 26219152 26219160 VAX2 JASPAR yes 70338015
chr6 26219152 26219160 VSX1 JASPAR yes 70338016
chr6 26219152 26219160 VSX2 JASPAR yes 70338017
chr6 26219179 26219199 TBX19 JASPAR yes 70338018
chr6 26219182 26219194 TEAD1 JASPAR yes 70338019
chr6 26219184 26219188 YY1 TRANSFAC yes 70338020
chr6 26219194 26219200 TBP TRANSFAC yes 70338021
chr6 26219205 26219216 PHOX2A JASPAR yes 70338022
chr6 26219205 26219216 PROP1 JASPAR yes 70338023
chr6 26219208 26219218 ALX3 JASPAR yes 70338024
chr6 26219208 26219218 GSX2 JASPAR yes 70338025
chr6 26219208 26219218 LBX2 JASPAR yes 70338026
chr6 26219208 26219218 MIXL1 JASPAR yes 70338027
chr6 26219209 26219217 BARX1 JASPAR yes 70338028
chr6 26219209 26219217 BSX JASPAR yes 70338029
chr6 26219209 26219217 EN1 JASPAR yes 70338030
chr6 26219209 26219217 ISX JASPAR yes 70338031
chr6 26219209 26219217 LHX9 JASPAR yes 70338032
chr6 26219209 26219217 MSX1 JASPAR yes 70338033
chr6 26219209 26219217 MSX2 JASPAR yes 70338034
chr6 26219209 26219217 PRRX1 JASPAR yes 70338035
chr6 26219209 26219217 RAX2 JASPAR yes 70338036
chr6 26219209 26219217 SHOX JASPAR yes 70338037
chr6 26219209 26219222 DUXA JASPAR yes 70338038
chr6 26219210 26219221 PHOX2A JASPAR yes 70338039
chr6 26219228 26219240 SRF JASPAR yes 70338040
chr6 26219232 26219242 MEF2A JASPAR yes 70338041
chr6 26219233 26219237 TEAD2 TRANSFAC yes 70338042
chr6 26219233 26219238 TBP TRANSFAC yes 70338043
chr6 26219242 26219256 PAX6 JASPAR yes 70338044
chr6 26219258 26219273 NR2C2 JASPAR yes 70338045
chr6 26219259 26219273 RXRG JASPAR yes 70338046
chr6 26219262 26219268 TCF4 TRANSFAC yes 70338047
chr6 26219264 26219277 NR2F1 JASPAR yes 70338048
chr6 26219268 26219272 ESR1 TRANSFAC yes 70338049
chr6 26219280 26219300 RREB1 JASPAR yes 70338050
SNP sites on vista51406[chr6:26219063-26219301]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26219075 rs201557229 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
8927135
chr6 26219080 rs551697482 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
8927136
chr6 26219086 rs139698203 A G
IRF1 RREB1
8927137
chr6 26219089 rs536602964 A G
IRF1 RREB1
8927138
chr6 26219095 rs112189801 C G
RREB1
8927139
Genes possibly regulated by vista51406[chr6:26219063-26219301]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 5091
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 5310
chr6 26156559 26157343 + HIST1H1E ENSG00000168298.4 26156559 0.97 0.89 6234 37496
chr6 26158349 26171577 + HIST1H2BD ENSG00000158373.7 26158349 0.92 0.84 6235 39286
chr6 26183958 26184454 + HIST1H2BE ENSG00000197697.3 26183958 0.86 0.96 6236 64895
chr6 26188938 26189304 - HIST1H4D ENSG00000188987.2 26189304 0.9 0.96 6237 70241
chr6 26197068 26199521 - HIST1H3D ENSG00000197409.6 26199521 0.91 0.9 6238 80458
chr6 26199079 26199471 - HIST1H2AD ENSG00000196866.2 26199471 0.96 0.93 6239 80408
chr6 26199748 26200942 + HIST1H2BF ENSG00000197846.3 26199748 0.9 0.92 6240 80685
chr6 26204858 26206266 + HIST1H4E ENSG00000198518.5 26204858 0.91 0.82 6241 85795
chr6 26216428 26216872 - HIST1H2BG ENSG00000187990.4 26216872 0.97 0.86 6242 97809
chr6 26217165 26217711 + HIST1H2AE ENSG00000168274.3 26217165 0.88 0.83 6243 98102
chr6 26225383 26225844 + HIST1H3E ENSG00000196966.3 26225383 0.97 0.98 6244 93918
chr6 26234440 26235216 - HIST1H1D ENSG00000124575.5 26235216 0.99 0.91 6245 84085
chr6 26240561 26240976 + HIST1H4F ENSG00000198327.3 26240561 0.92 1.0 6246 78740
chr6 26246886 26247259 - HIST1H4G ENSG00000124578.4 26247259 1.0 0.0 6247 72042
chr6 26250370 26250835 - HIST1H3F ENSG00000256316.1 26250835 0.95 0.94 6248 68466
chr6 26251879 26252303 + HIST1H2BH ENSG00000197459.2 26251879 0.88 0.89 6249 67422
chr6 26271146 26271612 - HIST1H3G ENSG00000256018.1 26271612 0.87 0.99 6250 47689
chr6 26273144 26273622 + HIST1H2BI ENSG00000168242.3 26273144 0.85 0.99 6251 46157
chr6 26281283 26285762 - HIST1H4H ENSG00000158406.2 26285762 0.88 0.91 6252 33539
Expression level of Genes
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miRNAs possibly regulated by vista51406[chr6:26219063-26219301]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results