EnhancerDB
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  3. vista51407[chr6:26223563-26223671]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51407[chr6:26223563-26223671]
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Tissue distribution of vista51407
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Transcription factor that possibly regulate vista51407[chr6:26223563-26223671]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26223566 26223573 SPIB JASPAR yes 70338051
chr6 26223573 26223588 AR JASPAR yes 70338052
chr6 26223593 26223603 GSX1 JASPAR yes 70338053
chr6 26223593 26223603 GSX2 JASPAR yes 70338054
chr6 26223594 26223602 NKX6-1 JASPAR yes 70338055
chr6 26223594 26223602 NKX6-2 JASPAR yes 70338056
chr6 26223596 26223600 YY1 TRANSFAC yes 70338057
chr6 26223598 26223612 MTF1 JASPAR yes 70338058
chr6 26223599 26223602 MYB TRANSFAC yes 70338059
chr6 26223609 26223619 SP1 JASPAR yes 70338060
chr6 26223611 26223626 RUNX2 JASPAR yes 70338061
chr6 26223619 26223631 HLF JASPAR yes 70338062
chr6 26223619 26223631 TEF JASPAR yes 70338063
chr6 26223626 26223637 PHOX2A JASPAR yes 70338064
chr6 26223626 26223637 PROP1 JASPAR yes 70338065
chr6 26223645 26223650 H4TF1 TRANSFAC yes 70338066
SNP sites on vista51407[chr6:26223563-26223671]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26223579 rs76956191 C T
AR
8927140
chr6 26223582 rs78901806 G A
AR
8927141
chr6 26223608 rs10214495 G C
MTF1
8927142
chr6 26223631 rs561872870 C T
HLF PHOX2A PROP1 TEF
8927143
Genes possibly regulated by vista51407[chr6:26223563-26223671]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 0.91 0.87 6232 591
chr6 26124373 26139344 + HIST1H2AC ENSG00000180573.8 26124373 0.9 0.84 6233 810
chr6 26156559 26157343 + HIST1H1E ENSG00000168298.4 26156559 0.97 0.89 6234 32996
chr6 26158349 26171577 + HIST1H2BD ENSG00000158373.7 26158349 0.92 0.84 6235 34786
chr6 26183958 26184454 + HIST1H2BE ENSG00000197697.3 26183958 0.86 0.96 6236 60395
chr6 26188938 26189304 - HIST1H4D ENSG00000188987.2 26189304 0.9 0.96 6237 65741
chr6 26197068 26199521 - HIST1H3D ENSG00000197409.6 26199521 0.91 0.9 6238 75958
chr6 26199079 26199471 - HIST1H2AD ENSG00000196866.2 26199471 0.96 0.93 6239 75908
chr6 26199748 26200942 + HIST1H2BF ENSG00000197846.3 26199748 0.9 0.92 6240 76185
chr6 26204858 26206266 + HIST1H4E ENSG00000198518.5 26204858 0.91 0.82 6241 81295
chr6 26216428 26216872 - HIST1H2BG ENSG00000187990.4 26216872 0.97 0.86 6242 93309
chr6 26217165 26217711 + HIST1H2AE ENSG00000168274.3 26217165 0.88 0.83 6243 93602
chr6 26225383 26225844 + HIST1H3E ENSG00000196966.3 26225383 0.97 0.98 6244 98288
chr6 26234440 26235216 - HIST1H1D ENSG00000124575.5 26235216 0.99 0.91 6245 88455
chr6 26240561 26240976 + HIST1H4F ENSG00000198327.3 26240561 0.92 1.0 6246 83110
chr6 26246886 26247259 - HIST1H4G ENSG00000124578.4 26247259 1.0 0.0 6247 76412
chr6 26250370 26250835 - HIST1H3F ENSG00000256316.1 26250835 0.95 0.94 6248 72836
chr6 26251879 26252303 + HIST1H2BH ENSG00000197459.2 26251879 0.88 0.89 6249 71792
chr6 26271146 26271612 - HIST1H3G ENSG00000256018.1 26271612 0.87 0.99 6250 52059
chr6 26273144 26273622 + HIST1H2BI ENSG00000168242.3 26273144 0.85 0.99 6251 50527
chr6 26281283 26285762 - HIST1H4H ENSG00000158406.2 26285762 0.88 0.91 6252 37909
Expression level of Genes
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miRNAs possibly regulated by vista51407[chr6:26223563-26223671]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results