EnhancerDB
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  3. vista51415[chr6:26397110-26397374]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51415[chr6:26397110-26397374]
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Tissue distribution of vista51415
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Transcription factor that possibly regulate vista51415[chr6:26397110-26397374]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26397111 26397118 SPIB JASPAR yes 70338395
chr6 26397145 26397159 RORA JASPAR yes 70338396
chr6 26397148 26397159 FOSL2 JASPAR yes 70338397
chr6 26397151 26397157 ESR1 TRANSFAC yes 70338398
chr6 26397153 26397157 ESR1 TRANSFAC yes 70338399
chr6 26397161 26397176 PRDM1 JASPAR yes 70338400
chr6 26397176 26397192 SOX8 JASPAR yes 70338401
chr6 26397201 26397211 NFKB1 JASPAR yes 70338402
chr6 26397201 26397211 RELA JASPAR yes 70338403
chr6 26397219 26397231 BHLHE23 JASPAR yes 70338404
chr6 26397220 26397230 OLIG1 JASPAR yes 70338405
chr6 26397220 26397230 OLIG2 JASPAR yes 70338406
chr6 26397220 26397230 OLIG3 JASPAR yes 70338407
chr6 26397224 26397228 YY1 TRANSFAC yes 70338408
chr6 26397224 26397240 NFYA JASPAR yes 70338409
chr6 26397225 26397235 HOXA13 JASPAR yes 70338410
chr6 26397225 26397235 HOXB13 JASPAR yes 70338411
chr6 26397225 26397235 HOXD13 JASPAR yes 70338412
chr6 26397225 26397236 HOXA10 JASPAR yes 70338413
chr6 26397226 26397235 CDX1 JASPAR yes 70338414
chr6 26397226 26397237 CDX2 JASPAR yes 70338415
chr6 26397242 26397257 RUNX2 JASPAR yes 70338416
chr6 26397243 26397256 SCRT2 JASPAR yes 70338417
chr6 26397243 26397258 SCRT1 JASPAR yes 70338418
chr6 26397263 26397278 PRDM1 JASPAR yes 70338419
chr6 26397272 26397287 AR JASPAR yes 70338420
chr6 26397274 26397288 MTF1 JASPAR yes 70338421
chr6 26397311 26397315 H4TF2 TRANSFAC yes 70338422
chr6 26397326 26397330 NFE TRANSFAC yes 70338423
chr6 26397341 26397345 TEAD2 TRANSFAC yes 70338424
chr6 26397347 26397362 AR JASPAR yes 70338425
chr6 26397368 26397371 MYB TRANSFAC yes 70338426
SNP sites on vista51415[chr6:26397110-26397374]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26397173 rs543851942 G A
PRDM1
8928572
chr6 26397216 rs60978077 G A no 8928573
chr6 26397231 rs75515670 A G
BHLHE23 CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 NFYA
8928574
chr6 26397351 rs72842968 C A
AR
8928575
Genes possibly regulated by vista51415[chr6:26397110-26397374]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26365387 26378546 + BTN3A2 ENSG00000186470.9 26365387 0.8 0.99 6253 68277
chr6 26383324 26395102 + BTN2A2 ENSG00000124508.12 26383324 0.74 1.0 6254 86214
chr6 26402465 26415444 + BTN3A1 ENSG00000026950.12 26402465 0.83 0.99 6255 94909
chr6 26440700 26453643 + BTN3A3 ENSG00000111801.11 26440700 0.77 0.99 6256 56674
chr6 26458150 26476849 + BTN2A1 ENSG00000112763.11 26458150 0.7 1.0 6257 39224
Expression level of Genes
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miRNAs possibly regulated by vista51415[chr6:26397110-26397374]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results