EnhancerDB
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  3. vista51421[chr6:26521444-26521777]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51421[chr6:26521444-26521777]
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Tissue distribution of vista51421
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Transcription factor that possibly regulate vista51421[chr6:26521444-26521777]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26520553 26521618 TBP UCSC Txn Factor no Conserved 108539203
chr6 26520553 26521618 TBP UCSC Txn Factor no Conserved 108539204
chr6 26520675 26522721 POLR2A UCSC Txn Factor no Conserved 108539206
chr6 26520675 26522721 POLR2A UCSC Txn Factor no Conserved 108539207
chr6 26520675 26522721 POLR2A UCSC Txn Factor no Conserved 108539208
chr6 26521288 26521763 RPC155 UCSC Txn Factor no Conserved 108539209
chr6 26521324 26521724 ATF3 UCSC Txn Factor no Conserved 108539210
chr6 26521329 26521659 MYBL2 UCSC Txn Factor no Conserved 108539211
chr6 26521345 26521609 CEBPB UCSC Txn Factor no Conserved 108539212
chr6 26521371 26521515 BDP1 UCSC Txn Factor no Conserved 108539213
chr6 26521392 26521748 GTF3C2 UCSC Txn Factor no Conserved 108539214
chr6 26521420 26521546 HSF1 UCSC Txn Factor no Conserved 108539215
chr6 26521776 26522165 E2F1 UCSC Txn Factor no Conserved 108539216
chr6 26521437 26521449 YY1 JASPAR yes 70338675
chr6 26521437 26521449 YY1 JASPAR yes 100905583
chr6 26521440 26521446 YY1 JASPAR yes 70338676
chr6 26521440 26521446 YY1 JASPAR yes 100905584
chr6 26521481 26521494 TFAP2A JASPAR yes 70338677
chr6 26521481 26521494 TFAP2B JASPAR yes 70338678
chr6 26521481 26521494 TFAP2C JASPAR yes 70338679
chr6 26521481 26521494 TFAP2A JASPAR yes 100905585
chr6 26521481 26521494 TFAP2B JASPAR yes 100905586
chr6 26521481 26521494 TFAP2C JASPAR yes 100905587
chr6 26521481 26521496 TFAP2C JASPAR yes 70338680
chr6 26521481 26521496 TFAP2C JASPAR yes 100905588
chr6 26521482 26521493 EBF1 JASPAR yes 70338681
chr6 26521482 26521493 EBF1 JASPAR yes 100905589
chr6 26521532 26521536 YY1 TRANSFAC yes 70338682
chr6 26521532 26521536 YY1 TRANSFAC yes 100905590
chr6 26521557 26521571 PAX6 JASPAR yes 70338683
chr6 26521557 26521571 PAX6 JASPAR yes 100905591
chr6 26521582 26521588 SOX10 JASPAR yes 70338684
chr6 26521582 26521588 SOX10 JASPAR yes 100905592
chr6 26521601 26521611 MEF2A JASPAR yes 70338685
chr6 26521601 26521611 MEF2A JASPAR yes 100905593
chr6 26521608 26521614 TBP TRANSFAC yes 70338686
chr6 26521608 26521614 TBP TRANSFAC yes 100905594
chr6 26521609 26521623 ONECUT3 JASPAR yes 70338687
chr6 26521609 26521623 ONECUT3 JASPAR yes 100905595
chr6 26521620 26521626 ETS1 JASPAR yes 70338688
chr6 26521620 26521626 ETS1 JASPAR yes 100905596
chr6 26521646 26521652 LEF1 TRANSFAC yes 70338689
chr6 26521646 26521652 SOX10 JASPAR yes 70338690
chr6 26521646 26521652 LEF1 TRANSFAC yes 100905597
chr6 26521646 26521652 SOX10 JASPAR yes 100905598
chr6 26521646 26521661 FOXP1 JASPAR yes 70338691
chr6 26521646 26521661 FOXP1 JASPAR yes 100905599
chr6 26521647 26521658 FOXP2 JASPAR yes 70338692
chr6 26521647 26521658 FOXP2 JASPAR yes 100905600
chr6 26521647 26521659 FOXC2 JASPAR yes 70338693
chr6 26521647 26521659 FOXC2 JASPAR yes 100905601
chr6 26521651 26521661 HOXA13 JASPAR yes 70338694
chr6 26521651 26521661 HOXB13 JASPAR yes 70338695
chr6 26521651 26521661 HOXD13 JASPAR yes 70338696
chr6 26521651 26521661 HOXA13 JASPAR yes 100905602
chr6 26521651 26521661 HOXB13 JASPAR yes 100905603
chr6 26521651 26521661 HOXD13 JASPAR yes 100905604
chr6 26521651 26521662 HOXA10 JASPAR yes 70338697
chr6 26521651 26521662 HOXC13 JASPAR yes 70338698
chr6 26521651 26521662 HOXA10 JASPAR yes 100905605
chr6 26521651 26521662 HOXC13 JASPAR yes 100905606
chr6 26521652 26521661 CDX1 JASPAR yes 70338699
chr6 26521652 26521661 CDX1 JASPAR yes 100905607
chr6 26521652 26521662 MNX1 JASPAR yes 70338700
chr6 26521652 26521662 MNX1 JASPAR yes 100905608
chr6 26521652 26521663 CDX2 JASPAR yes 70338701
chr6 26521652 26521663 CDX2 JASPAR yes 100905609
chr6 26521666 26521677 ESRRA JASPAR yes 70338702
chr6 26521666 26521677 ESRRA JASPAR yes 100905610
chr6 26521720 26521731 CEBPA JASPAR yes 70338703
chr6 26521720 26521731 CEBPA JASPAR yes 100905611
chr6 26521721 26521732 CEBPB JASPAR yes 70338704
chr6 26521721 26521732 CEBPB JASPAR yes 100905612
chr6 26521725 26521739 RXRB JASPAR yes 70338705
chr6 26521725 26521739 RXRG JASPAR yes 70338706
chr6 26521725 26521739 RXRB JASPAR yes 100905613
chr6 26521725 26521739 RXRG JASPAR yes 100905614
chr6 26521734 26521755 ZNF263 JASPAR yes 70338707
chr6 26521734 26521755 ZNF263 JASPAR yes 100905615
chr6 26521736 26521757 IRF1 JASPAR yes 70338708
chr6 26521736 26521757 IRF1 JASPAR yes 100905616
chr6 26521737 26521758 ZNF263 JASPAR yes 70338709
chr6 26521737 26521758 ZNF263 JASPAR yes 100905617
chr6 26521740 26521750 NFATC3 JASPAR yes 70338710
chr6 26521740 26521750 NFATC3 JASPAR yes 100905618
chr6 26521742 26521748 ETS1 JASPAR yes 70338711
chr6 26521742 26521748 ETS1 JASPAR yes 100905619
chr6 26521742 26521752 ELK1 JASPAR yes 70338712
chr6 26521742 26521752 ELK1 JASPAR yes 100905620
chr6 26521756 26521760 NFE TRANSFAC yes 70338713
chr6 26521756 26521760 NFE TRANSFAC yes 100905621
chr6 26521765 26521786 IRF1 JASPAR yes 70338714
chr6 26521765 26521786 IRF1 JASPAR yes 100905622
chr6 26521767 26521782 PRDM1 JASPAR yes 70338715
chr6 26521767 26521782 PRDM1 JASPAR yes 100905623
chr6 26521768 26521789 ZNF263 JASPAR yes 70338716
chr6 26521768 26521789 ZNF263 JASPAR yes 100905624
chr6 26521770 26521781 E2F6 JASPAR yes 70338717
chr6 26521770 26521781 E2F6 JASPAR yes 100905625
chr6 26521771 26521792 ZNF263 JASPAR yes 70338718
chr6 26521771 26521792 ZNF263 JASPAR yes 100905626
chr6 26521773 26521788 PRDM1 JASPAR yes 70338719
chr6 26521773 26521788 PRDM1 JASPAR yes 100905627
chr6 26521776 26521787 E2F6 JASPAR yes 70338720
chr6 26521776 26521787 E2F6 JASPAR yes 100905628
SNP sites on vista51421[chr6:26521444-26521777]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26521484 rs189360088 C T
ATF3 BDP1 CEBPB EBF1 GTF3C2 HSF1 MYBL2 POLR2A RPC155 TBP TFAP2A TFAP2B TFAP2C
8929058
chr6 26521488 rs192544521 G A,C
ATF3 BDP1 CEBPB EBF1 GTF3C2 HSF1 MYBL2 POLR2A RPC155 TBP TFAP2A TFAP2B TFAP2C
8929059
chr6 26521520 rs6905163 T C,G
ATF3 CEBPB GTF3C2 HSF1 MYBL2 POLR2A RPC155 TBP
8929060
chr6 26521526 rs148520926 C G,T
ATF3 CEBPB GTF3C2 HSF1 MYBL2 POLR2A RPC155 TBP
8929061
chr6 26521546 rs144200722 ATCGAGTTTAAGTTTACGC A
ATF3 CEBPB GTF3C2 HSF1 MYBL2 POLR2A RPC155 TBP
8929062
chr6 26521559 rs189972032 T C
ATF3 CEBPB GTF3C2 MYBL2 PAX6 POLR2A RPC155 TBP
8929063
chr6 26521589 rs6925703 G A
ATF3 CEBPB GTF3C2 MYBL2 POLR2A RPC155 TBP
8929064
chr6 26521600 rs527298968 C T
ATF3 CEBPB GTF3C2 MYBL2 POLR2A RPC155 TBP
8929065
chr6 26521643 rs564619436 C T
ATF3 GTF3C2 MYBL2 POLR2A RPC155
8929066
chr6 26521718 rs550085439 C A,G
ATF3 GTF3C2 POLR2A RPC155
8929067
Genes possibly regulated by vista51421[chr6:26521444-26521777]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26440700 26453643 + BTN3A3 ENSG00000111801.11 26440700 0.77 0.99 6256 19256
chr6 26458150 26476849 + BTN2A1 ENSG00000112763.11 26458150 0.7 1.0 6257 36706
chr6 26501449 26510650 + BTN1A1 ENSG00000124557.8 26501449 0.91 1.0 6258 80005
chr6 26538633 26546482 + HMGN4 ENSG00000182952.4 26538633 0.56 0.99 6259 83144
chr6 26597180 26600278 + ABT1 ENSG00000146109.3 26597180 0.63 1.0 6260 24597
Expression level of Genes
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miRNAs possibly regulated by vista51421[chr6:26521444-26521777]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results