EnhancerDB
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  3. vista51425[chr6:26537641-26538043]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51425[chr6:26537641-26538043]
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Tissue distribution of vista51425
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Transcription factor that possibly regulate vista51425[chr6:26537641-26538043]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26536794 26538975 POLR2A UCSC Txn Factor no Conserved 108539225
chr6 26536794 26538975 POLR2A UCSC Txn Factor no Conserved 108539226
chr6 26537370 26537979 REST UCSC Txn Factor no Conserved 108539227
chr6 26537449 26538140 MYC UCSC Txn Factor no Conserved 108539228
chr6 26537455 26538133 MAX UCSC Txn Factor no Conserved 108539229
chr6 26537479 26537969 TBP UCSC Txn Factor no Conserved 108539230
chr6 26537504 26538545 RPC155 UCSC Txn Factor no Conserved 108539231
chr6 26537505 26538051 MYBL2 UCSC Txn Factor no Conserved 108539232
chr6 26537521 26538522 ATF3 UCSC Txn Factor no Conserved 108539233
chr6 26537549 26537819 BDP1 UCSC Txn Factor no Conserved 108539234
chr6 26537574 26537889 CEBPB UCSC Txn Factor no Conserved 108539235
chr6 26537595 26537879 TEAD4 UCSC Txn Factor no Conserved 108539236
chr6 26537664 26537970 GTF3C2 UCSC Txn Factor no Conserved 108539237
chr6 26537791 26538061 USF1 UCSC Txn Factor no Conserved 108539238
chr6 26537810 26538101 USF2 UCSC Txn Factor no Conserved 108539239
chr6 26537660 26537674 RORA JASPAR yes 70338796
chr6 26537691 26537702 CEBPA JASPAR yes 70338797
chr6 26537730 26537739 NF-IL6 TRANSFAC yes 70338798
chr6 26537731 26537741 CEBPB JASPAR yes 70338799
chr6 26537731 26537741 CEBPD JASPAR yes 70338800
chr6 26537731 26537741 CEBPE JASPAR yes 70338801
chr6 26537731 26537741 CEBPG JASPAR yes 70338802
chr6 26537731 26537742 CEBPB JASPAR yes 70338803
chr6 26537741 26537746 GATA2 JASPAR yes 70338804
chr6 26537744 26537747 MYB TRANSFAC yes 70338805
chr6 26537765 26537780 HSF1 JASPAR yes 70338806
chr6 26537812 26537822 HOXD11 JASPAR yes 70338807
chr6 26537812 26537823 HOXC11 JASPAR yes 70338808
chr6 26537812 26537823 HOXC12 JASPAR yes 70338809
chr6 26537841 26537846 ETS2 TRANSFAC yes 70338810
chr6 26537841 26537849 FEV JASPAR yes 70338811
chr6 26537842 26537853 NFKB1 JASPAR yes 70338812
chr6 26537862 26537877 STAT1 JASPAR yes 70338813
chr6 26537864 26537875 STAT3 JASPAR yes 70338814
chr6 26537890 26537894 LFA1 TRANSFAC yes 70338815
chr6 26537901 26537913 SRF JASPAR yes 70338816
chr6 26537902 26537914 TAL1 JASPAR yes 70338817
chr6 26537903 26537915 BHLHE23 JASPAR yes 70338818
chr6 26537904 26537914 BHLHE22 JASPAR yes 70338819
chr6 26537904 26537914 NEUROD2 JASPAR yes 70338820
chr6 26537904 26537914 OLIG1 JASPAR yes 70338821
chr6 26537904 26537914 OLIG2 JASPAR yes 70338822
chr6 26537904 26537914 OLIG3 JASPAR yes 70338823
chr6 26537919 26537923 YY1 TRANSFAC yes 70338824
chr6 26537929 26537947 ESR2 JASPAR yes 70338825
chr6 26537945 26537959 CREB3L1 JASPAR yes 70338826
chr6 26537946 26537956 MAX JASPAR yes 70338827
chr6 26537946 26537957 USF1 JASPAR yes 70338828
chr6 26537946 26537957 USF2 JASPAR yes 70338829
chr6 26537947 26537957 CLOCK JASPAR yes 70338830
chr6 26537947 26537957 FIGLA JASPAR yes 70338831
chr6 26537947 26537957 MAX JASPAR yes 70338832
chr6 26537947 26537957 MLX JASPAR yes 70338833
chr6 26537947 26537957 MNT JASPAR yes 70338834
chr6 26537948 26537955 USF1 JASPAR yes 70338835
chr6 26537948 26537958 MAX JASPAR yes 70338836
chr6 26537949 26537954 MYC TRANSFAC yes 70338837
chr6 26537949 26537954 USF1 TRANSFAC yes 70338838
chr6 26537949 26537954 USF2 TRANSFAC yes 70338839
chr6 26537949 26537956 USF1 JASPAR yes 70338840
chr6 26537956 26537959 MYB TRANSFAC yes 70338841
chr6 26537998 26538007 HIC2 JASPAR yes 70338842
chr6 26538012 26538024 YY1 JASPAR yes 70338843
chr6 26538017 26538021 YY1 TRANSFAC yes 70338844
chr6 26538020 26538032 E2F8 JASPAR yes 70338845
SNP sites on vista51425[chr6:26537641-26538043]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26537673 rs118007992 T C,G
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RORA RPC155 TBP TEAD4
8929112
chr6 26537710 rs139151207 C A,T
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4
8929113
chr6 26537720 rs74418533 C G,T
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4
8929114
chr6 26537723 rs73738482 G T
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4
8929115
chr6 26537730 rs78665123 C T
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC NF-IL6 POLR2A REST RPC155 TBP TEAD4
8929116
chr6 26537732 rs149463913 G A
ATF3 BDP1 CEBPB CEBPD CEBPE CEBPG GTF3C2 MAX MYBL2 MYC NF-IL6 POLR2A REST RPC155 TBP TEAD4
8929117
chr6 26537746 rs116347594 A G
ATF3 BDP1 CEBPB GATA2 GTF3C2 MAX MYB MYBL2 MYC POLR2A REST RPC155 TBP TEAD4
8929118
chr6 26537798 rs143893043 G C
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4 USF1
8929119
chr6 26537801 rs6920256 G A
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4 USF1
8929120
chr6 26537806 rs531788488 C G,T
ATF3 BDP1 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4 USF1
8929121
chr6 26537813 rs10456047 G A
ATF3 BDP1 CEBPB GTF3C2 HOXC11 HOXC12 HOXD11 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4 USF1 USF2
8929122
chr6 26537825 rs114696539 T C
ATF3 CEBPB GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP TEAD4 USF1 USF2
8929123
chr6 26537851 rs148605455 C T
ATF3 CEBPB GTF3C2 MAX MYBL2 MYC NFKB1 POLR2A REST RPC155 TBP TEAD4 USF1 USF2
8929124
chr6 26537894 rs79758576 C A,T
ATF3 GTF3C2 LFA1 MAX MYBL2 MYC POLR2A REST RPC155 TBP USF1 USF2
8929125
chr6 26537898 rs530403244 TC T
ATF3 GTF3C2 MAX MYBL2 MYC POLR2A REST RPC155 TBP USF1 USF2
8929126
chr6 26537909 rs10456331 T C
ATF3 BHLHE22 BHLHE23 GTF3C2 MAX MYBL2 MYC NEUROD2 OLIG1 OLIG2 OLIG3 POLR2A REST RPC155 SRF TAL1 TBP USF1 USF2
8929127
chr6 26537983 rs563647106 T G
ATF3 MAX MYBL2 MYC POLR2A RPC155 USF1 USF2
8929128
Genes possibly regulated by vista51425[chr6:26537641-26538043]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26440700 26453643 + BTN3A3 ENSG00000111801.11 26440700 0.77 0.99 6256 3059
chr6 26458150 26476849 + BTN2A1 ENSG00000112763.11 26458150 0.7 1.0 6257 20509
chr6 26501449 26510650 + BTN1A1 ENSG00000124557.8 26501449 0.91 1.0 6258 63808
chr6 26538633 26546482 + HMGN4 ENSG00000182952.4 26538633 0.56 0.99 6259 99410
chr6 26597180 26600278 + ABT1 ENSG00000146109.3 26597180 0.63 1.0 6260 40863
Expression level of Genes
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miRNAs possibly regulated by vista51425[chr6:26537641-26538043]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results