EnhancerDB
  1. Home
  2. Enhancers
  3. vista51426[chr6:26550694-26551000]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51426[chr6:26550694-26551000]
Back to top
Tissue distribution of vista51426
Back to top
Transcription factor that possibly regulate vista51426[chr6:26550694-26551000]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 26550877 26551187 GABPA UCSC Txn Factor no Conserved 108539240
chr6 26550694 26550709 FOXP1 JASPAR yes 70338846
chr6 26550694 26550709 FOXP1 JASPAR yes 100905959
chr6 26550695 26550710 FOXP1 JASPAR yes 70338847
chr6 26550695 26550710 FOXP1 JASPAR yes 100905960
chr6 26550695 26550716 IRF1 JASPAR yes 70338848
chr6 26550695 26550716 IRF1 JASPAR yes 100905961
chr6 26550696 26550711 FOXP1 JASPAR yes 70338849
chr6 26550696 26550711 FOXP1 JASPAR yes 100905962
chr6 26550696 26550717 IRF1 JASPAR yes 70338850
chr6 26550696 26550717 IRF1 JASPAR yes 100905963
chr6 26550697 26550712 FOXP1 JASPAR yes 70338851
chr6 26550697 26550712 FOXP1 JASPAR yes 100905964
chr6 26550698 26550713 FOXP1 JASPAR yes 70338852
chr6 26550698 26550713 FOXP1 JASPAR yes 100905965
chr6 26550698 26550719 IRF1 JASPAR yes 70338853
chr6 26550698 26550719 IRF1 JASPAR yes 100905966
chr6 26550699 26550714 FOXP1 JASPAR yes 70338854
chr6 26550699 26550714 FOXP1 JASPAR yes 100905967
chr6 26550700 26550715 FOXP1 JASPAR yes 70338855
chr6 26550700 26550715 FOXP1 JASPAR yes 100905968
chr6 26550739 26550743 H1TF2 TRANSFAC yes 70338856
chr6 26550739 26550743 NFE TRANSFAC yes 70338857
chr6 26550739 26550743 SRF TRANSFAC yes 70338858
chr6 26550739 26550743 H1TF2 TRANSFAC yes 100905969
chr6 26550739 26550743 NFE TRANSFAC yes 100905970
chr6 26550739 26550743 SRF TRANSFAC yes 100905971
chr6 26550753 26550771 MAFF JASPAR yes 70338859
chr6 26550753 26550771 MAFF JASPAR yes 100905972
chr6 26550754 26550769 MAFK JASPAR yes 70338860
chr6 26550754 26550769 MAFK JASPAR yes 100905973
chr6 26550755 26550761 ESR1 TRANSFAC yes 70338861
chr6 26550755 26550761 ESR1 TRANSFAC yes 100905974
chr6 26550757 26550761 ESR1 TRANSFAC yes 70338862
chr6 26550757 26550761 ESR1 TRANSFAC yes 100905975
chr6 26550763 26550775 YY1 JASPAR yes 70338863
chr6 26550763 26550775 YY1 JASPAR yes 100905976
chr6 26550790 26550795 GATA2 JASPAR yes 70338864
chr6 26550790 26550795 GATA2 JASPAR yes 100905977
chr6 26550793 26550805 TFAP2A JASPAR yes 70338865
chr6 26550793 26550805 TFAP2B JASPAR yes 70338866
chr6 26550793 26550805 TFAP2C JASPAR yes 70338867
chr6 26550793 26550805 TFAP2A JASPAR yes 100905978
chr6 26550793 26550805 TFAP2B JASPAR yes 100905979
chr6 26550793 26550805 TFAP2C JASPAR yes 100905980
chr6 26550821 26550826 SP1 TRANSFAC yes 70338868
chr6 26550821 26550826 SP1 TRANSFAC yes 100905981
chr6 26550823 26550832 SP1 TRANSFAC yes 70338869
chr6 26550823 26550832 SP1 TRANSFAC yes 100905982
chr6 26550824 26550830 SP1 TRANSFAC yes 70338870
chr6 26550824 26550830 SP1 TRANSFAC yes 100905983
chr6 26550824 26550834 SP1 JASPAR yes 70338871
chr6 26550824 26550834 SP1 JASPAR yes 100905984
chr6 26550825 26550832 SP1 TRANSFAC yes 70338872
chr6 26550825 26550832 SP1 TRANSFAC yes 100905985
chr6 26550826 26550831 SP1 TRANSFAC yes 70338873
chr6 26550826 26550831 SP1 TRANSFAC yes 100905986
chr6 26550826 26550832 SP1 TRANSFAC yes 70338874
chr6 26550826 26550832 SP1 TRANSFAC yes 100905987
chr6 26550856 26550866 ERF JASPAR yes 70338875
chr6 26550856 26550866 ETV3 JASPAR yes 70338876
chr6 26550856 26550866 ETV6 JASPAR yes 70338877
chr6 26550856 26550866 ERF JASPAR yes 100905988
chr6 26550856 26550866 ETV3 JASPAR yes 100905989
chr6 26550856 26550866 ETV6 JASPAR yes 100905990
chr6 26550858 26550864 ETS1 JASPAR yes 70338878
chr6 26550858 26550864 SPI1 JASPAR yes 70338879
chr6 26550858 26550864 ETS1 JASPAR yes 100905991
chr6 26550858 26550864 SPI1 JASPAR yes 100905992
chr6 26550864 26550869 SP1 TRANSFAC yes 70338880
chr6 26550864 26550869 SP1 TRANSFAC yes 100905993
chr6 26550884 26550891 E2F1 TRANSFAC yes 70338881
chr6 26550884 26550891 E2F1 TRANSFAC yes 100905994
chr6 26550901 26550916 TFAP2C JASPAR yes 70338882
chr6 26550901 26550916 TFAP2C JASPAR yes 100905995
chr6 26550902 26550913 TFAP2A JASPAR yes 70338883
chr6 26550902 26550913 TFAP2B JASPAR yes 70338884
chr6 26550902 26550913 TFAP2A JASPAR yes 100905996
chr6 26550902 26550913 TFAP2B JASPAR yes 100905997
chr6 26550902 26550915 TFAP2A JASPAR yes 70338885
chr6 26550902 26550915 TFAP2B JASPAR yes 70338886
chr6 26550902 26550915 TFAP2C JASPAR yes 70338887
chr6 26550902 26550915 TFAP2A JASPAR yes 100905998
chr6 26550902 26550915 TFAP2B JASPAR yes 100905999
chr6 26550902 26550915 TFAP2C JASPAR yes 100906000
chr6 26550903 26550912 TFAP2A JASPAR yes 70338888
chr6 26550903 26550912 TFAP2A JASPAR yes 100906001
chr6 26550913 26550931 NFYA JASPAR yes 70338889
chr6 26550913 26550931 NFYA JASPAR yes 100906002
chr6 26550939 26550944 MYC TRANSFAC yes 70338890
chr6 26550939 26550944 MYC TRANSFAC yes 100906003
chr6 26550970 26550982 EHF JASPAR yes 70338891
chr6 26550970 26550982 ELF4 JASPAR yes 70338892
chr6 26550970 26550982 EHF JASPAR yes 100906004
chr6 26550970 26550982 ELF4 JASPAR yes 100906005
chr6 26550970 26550983 ELF3 JASPAR yes 70338893
chr6 26550970 26550983 ELF3 JASPAR yes 100906006
chr6 26550975 26550985 RELA JASPAR yes 70338894
chr6 26550975 26550985 RELA JASPAR yes 100906007
chr6 26550981 26550995 RXRB JASPAR yes 70338895
chr6 26550981 26550995 RXRG JASPAR yes 70338896
chr6 26550981 26550995 RXRB JASPAR yes 100906008
chr6 26550981 26550995 RXRG JASPAR yes 100906009
chr6 26550981 26550996 NR2C2 JASPAR yes 70338897
chr6 26550981 26550996 NR2C2 JASPAR yes 100906010
SNP sites on vista51426[chr6:26550694-26551000]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 26550743 rs146794855 A G
H1TF2 NFE SRF
8929183
chr6 26550842 rs568962658 C T no 8929184
chr6 26550865 rs554226804 A G
ERF ETV3 ETV6 SP1
8929185
chr6 26550915 rs567840245 G A
GABPA NFYA TFAP2A TFAP2B TFAP2C
8929186
chr6 26550954 rs12526680 A G
GABPA
8929187
Genes possibly regulated by vista51426[chr6:26550694-26551000]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 26458150 26476849 + BTN2A1 ENSG00000112763.11 26458150 0.7 1.0 6257 7456
chr6 26501449 26510650 + BTN1A1 ENSG00000124557.8 26501449 0.91 1.0 6258 50755
chr6 26538633 26546482 + HMGN4 ENSG00000182952.4 26538633 0.56 0.99 6259 87939
chr6 26597180 26600278 + ABT1 ENSG00000146109.3 26597180 0.63 1.0 6260 53820
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51426[chr6:26550694-26551000]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results