EnhancerDB
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  3. vista51430[chr6:27143830-27144149]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51430[chr6:27143830-27144149]
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Tissue distribution of vista51430
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Transcription factor that possibly regulate vista51430[chr6:27143830-27144149]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27143857 27143861 NFE TRANSFAC yes 70339019
chr6 27143857 27143861 NFE TRANSFAC yes 100922229
chr6 27143857 27143870 SMAD2 JASPAR yes 70339020
chr6 27143857 27143870 SMAD2 JASPAR yes 100922230
chr6 27143860 27143881 ZNF263 JASPAR yes 70339021
chr6 27143860 27143881 ZNF263 JASPAR yes 100922231
chr6 27143877 27143881 YY1 TRANSFAC yes 70339022
chr6 27143877 27143881 YY1 TRANSFAC yes 100922232
chr6 27143883 27143895 PKNOX1 JASPAR yes 70339023
chr6 27143883 27143895 TGIF2 JASPAR yes 70339024
chr6 27143883 27143895 PKNOX1 JASPAR yes 100922233
chr6 27143883 27143895 TGIF2 JASPAR yes 100922234
chr6 27143888 27143892 YY1 TRANSFAC yes 70339025
chr6 27143888 27143892 YY1 TRANSFAC yes 100922235
chr6 27143890 27143901 TBX20 JASPAR yes 70339026
chr6 27143890 27143901 TBX20 JASPAR yes 100922236
chr6 27143892 27143910 IRF2 JASPAR yes 70339027
chr6 27143892 27143910 IRF2 JASPAR yes 100922237
chr6 27143898 27143902 NFE TRANSFAC yes 70339028
chr6 27143898 27143902 NFE TRANSFAC yes 100922238
chr6 27143904 27143914 HOXC10 JASPAR yes 70339029
chr6 27143904 27143914 HOXD11 JASPAR yes 70339030
chr6 27143904 27143914 HOXC10 JASPAR yes 100922239
chr6 27143904 27143914 HOXD11 JASPAR yes 100922240
chr6 27143904 27143915 HOXC11 JASPAR yes 70339031
chr6 27143904 27143915 HOXC12 JASPAR yes 70339032
chr6 27143904 27143915 HOXC13 JASPAR yes 70339033
chr6 27143904 27143915 HOXD12 JASPAR yes 70339034
chr6 27143904 27143915 HOXC11 JASPAR yes 100922241
chr6 27143904 27143915 HOXC12 JASPAR yes 100922242
chr6 27143904 27143915 HOXC13 JASPAR yes 100922243
chr6 27143904 27143915 HOXD12 JASPAR yes 100922244
chr6 27143907 27143923 SRF JASPAR yes 70339035
chr6 27143907 27143923 SRF JASPAR yes 100922245
chr6 27143926 27143935 SRY JASPAR yes 70339036
chr6 27143926 27143935 SRY JASPAR yes 100922246
chr6 27143931 27143941 POU6F2 JASPAR yes 70339037
chr6 27143931 27143941 POU6F2 JASPAR yes 100922247
chr6 27143963 27143974 HOXC11 JASPAR yes 70339038
chr6 27143963 27143974 HOXC11 JASPAR yes 100922248
chr6 27143964 27143974 HOXD11 JASPAR yes 70339039
chr6 27143964 27143974 HOXD11 JASPAR yes 100922249
chr6 27143994 27144006 TAL1 JASPAR yes 70339040
chr6 27143994 27144006 TAL1 JASPAR yes 100922250
chr6 27143995 27144007 PKNOX1 JASPAR yes 70339041
chr6 27143995 27144007 PKNOX2 JASPAR yes 70339042
chr6 27143995 27144007 TGIF1 JASPAR yes 70339043
chr6 27143995 27144007 TGIF2 JASPAR yes 70339044
chr6 27143995 27144007 PKNOX1 JASPAR yes 100922251
chr6 27143995 27144007 PKNOX2 JASPAR yes 100922252
chr6 27143995 27144007 TGIF1 JASPAR yes 100922253
chr6 27143995 27144007 TGIF2 JASPAR yes 100922254
chr6 27143995 27144008 ZBTB18 JASPAR yes 70339045
chr6 27143995 27144008 ZBTB18 JASPAR yes 100922255
chr6 27143996 27144006 FIGLA JASPAR yes 70339046
chr6 27143996 27144006 MSC JASPAR yes 70339047
chr6 27143996 27144006 MYF6 JASPAR yes 70339048
chr6 27143996 27144006 TFAP4 JASPAR yes 70339049
chr6 27143996 27144006 FIGLA JASPAR yes 100922256
chr6 27143996 27144006 MSC JASPAR yes 100922257
chr6 27143996 27144006 MYF6 JASPAR yes 100922258
chr6 27143996 27144006 TFAP4 JASPAR yes 100922259
chr6 27144000 27144008 MEIS2 JASPAR yes 70339050
chr6 27144000 27144008 MEIS3 JASPAR yes 70339051
chr6 27144000 27144008 MEIS2 JASPAR yes 100922260
chr6 27144000 27144008 MEIS3 JASPAR yes 100922261
chr6 27144001 27144005 NFE TRANSFAC yes 70339052
chr6 27144001 27144005 NFE TRANSFAC yes 100922262
chr6 27144001 27144008 MEIS1 JASPAR yes 70339053
chr6 27144001 27144008 MEIS1 JASPAR yes 100922263
chr6 27144009 27144013 TEAD2 TRANSFAC yes 70339054
chr6 27144009 27144013 TEAD2 TRANSFAC yes 100922264
chr6 27144013 27144024 TFAP2A JASPAR yes 70339055
chr6 27144013 27144024 TFAP2B JASPAR yes 70339056
chr6 27144013 27144024 TFAP2C JASPAR yes 70339057
chr6 27144013 27144024 TFAP2A JASPAR yes 100922265
chr6 27144013 27144024 TFAP2B JASPAR yes 100922266
chr6 27144013 27144024 TFAP2C JASPAR yes 100922267
chr6 27144023 27144026 MYB TRANSFAC yes 70339058
chr6 27144023 27144026 MYB TRANSFAC yes 100922268
chr6 27144031 27144046 MEF2A JASPAR yes 70339059
chr6 27144031 27144046 MEF2A JASPAR yes 100922269
chr6 27144032 27144047 MEF2C JASPAR yes 70339060
chr6 27144032 27144047 MEF2C JASPAR yes 100922270
chr6 27144035 27144039 YY1 TRANSFAC yes 70339061
chr6 27144035 27144039 YY1 TRANSFAC yes 100922271
chr6 27144040 27144043 MYB TRANSFAC yes 70339062
chr6 27144040 27144043 MYB TRANSFAC yes 100922272
chr6 27144050 27144055 MYC TRANSFAC yes 70339063
chr6 27144050 27144055 MYC TRANSFAC yes 100922273
chr6 27144074 27144080 NFIC JASPAR yes 70339064
chr6 27144074 27144080 NFIC JASPAR yes 100922274
chr6 27144081 27144095 XBP1 JASPAR yes 70339065
chr6 27144081 27144095 XBP1 JASPAR yes 100922275
chr6 27144082 27144096 CREB3 JASPAR yes 70339066
chr6 27144082 27144096 CREB3 JASPAR yes 100922276
chr6 27144087 27144092 ATF1 TRANSFAC yes 70339067
chr6 27144087 27144092 ATF1 TRANSFAC yes 100922277
chr6 27144098 27144112 TLX1 JASPAR yes 70339068
chr6 27144098 27144112 TLX1 JASPAR yes 100922278
chr6 27144116 27144134 RARA JASPAR yes 70339069
chr6 27144116 27144134 RARA JASPAR yes 100922279
chr6 27144138 27144150 FOXI1 JASPAR yes 70339070
chr6 27144138 27144150 FOXI1 JASPAR yes 100922280
chr6 27144142 27144148 HiNF-A TRANSFAC yes 70339071
chr6 27144142 27144148 HiNF-A TRANSFAC yes 100922281
SNP sites on vista51430[chr6:27143830-27144149]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27143868 rs9366683 C T
SMAD2 ZNF263
8930861
chr6 27143883 rs13194053 T C
PKNOX1 TGIF2
8930862
chr6 27143957 rs9717556 A C,T no 8930863
chr6 27144051 rs141002068 C T
MYC
8930864
Genes possibly regulated by vista51430[chr6:27143830-27144149]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27093676 27100541 - HIST1H2BJ ENSG00000124635.7 27100541 0.89 0.85 6262 56711
chr6 27100832 27103070 + HIST1H2AG ENSG00000196787.2 27100832 0.89 0.9 6263 57002
chr6 27106073 27114619 - HIST1H2BK ENSG00000197903.6 27114619 0.77 0.9 6264 70789
chr6 27107076 27108418 + HIST1H4I ENSG00000198339.3 27107076 0.86 0.95 6265 63246
chr6 27114861 27115317 + HIST1H2AH ENSG00000184825.4 27114861 0.86 0.93 6266 71031
chr6 27215480 27224403 + PRSS16 ENSG00000112812.11 27215480 1.0 1.0 6267 28669
Expression level of Genes
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miRNAs possibly regulated by vista51430[chr6:27143830-27144149]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results