EnhancerDB
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  3. vista51431[chr6:27145585-27145720]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51431[chr6:27145585-27145720]
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Tissue distribution of vista51431
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Transcription factor that possibly regulate vista51431[chr6:27145585-27145720]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27145315 27145865 GATA2 UCSC Txn Factor no Conserved 108539245
chr6 27145315 27145865 GATA2 UCSC Txn Factor no Conserved 108539246
chr6 27145407 27146234 TCF7L2 UCSC Txn Factor no Conserved 108539247
chr6 27145407 27146234 TCF7L2 UCSC Txn Factor no Conserved 108539248
chr6 27145449 27145873 CTCF UCSC Txn Factor no Conserved 108539249
chr6 27145449 27145873 CTCF UCSC Txn Factor no Conserved 108539250
chr6 27145451 27146460 POLR2A UCSC Txn Factor no Conserved 108539251
chr6 27145451 27146460 POLR2A UCSC Txn Factor no Conserved 108539252
chr6 27145522 27145795 RAD21 UCSC Txn Factor no Conserved 108539253
chr6 27145522 27145795 RAD21 UCSC Txn Factor no Conserved 108539254
chr6 27145588 27145685 GATA3 UCSC Txn Factor no Conserved 108539255
chr6 27145573 27145586 ZBTB18 JASPAR yes 70339072
chr6 27145573 27145586 ZBTB18 JASPAR yes 100922484
chr6 27145574 27145586 NHLH1 JASPAR yes 70339073
chr6 27145574 27145586 NHLH1 JASPAR yes 100922485
chr6 27145575 27145585 NHLH1 JASPAR yes 70339074
chr6 27145575 27145585 TFAP4 JASPAR yes 70339075
chr6 27145575 27145585 NHLH1 JASPAR yes 100922486
chr6 27145575 27145585 TFAP4 JASPAR yes 100922487
chr6 27145640 27145644 LFA1 TRANSFAC yes 70339076
chr6 27145640 27145644 LFA1 TRANSFAC yes 100922488
chr6 27145655 27145672 PAX1 JASPAR yes 70339077
chr6 27145655 27145672 PAX1 JASPAR yes 100922489
chr6 27145685 27145700 PRDM1 JASPAR yes 70339078
chr6 27145685 27145700 PRDM1 JASPAR yes 100922490
chr6 27145690 27145696 TCF4 TRANSFAC yes 70339079
chr6 27145690 27145696 TCF4 TRANSFAC yes 100922491
chr6 27145711 27145725 TCF7L2 JASPAR yes 70339080
chr6 27145711 27145725 TCF7L2 JASPAR yes 100922492
SNP sites on vista51431[chr6:27145585-27145720]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27145586 rs6931711 C T
CTCF GATA2 NHLH1 POLR2A RAD21 TCF7L2 ZBTB18
8930885
chr6 27145648 rs150650444 G A
CTCF GATA2 GATA3 POLR2A RAD21 TCF7L2
8930886
chr6 27145704 rs554179869 C A
CTCF GATA2 POLR2A RAD21 TCF7L2
8930887
Genes possibly regulated by vista51431[chr6:27145585-27145720]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27093676 27100541 - HIST1H2BJ ENSG00000124635.7 27100541 0.89 0.85 6262 54956
chr6 27100832 27103070 + HIST1H2AG ENSG00000196787.2 27100832 0.89 0.9 6263 55247
chr6 27106073 27114619 - HIST1H2BK ENSG00000197903.6 27114619 0.77 0.9 6264 69034
chr6 27107076 27108418 + HIST1H4I ENSG00000198339.3 27107076 0.86 0.95 6265 61491
chr6 27114861 27115317 + HIST1H2AH ENSG00000184825.4 27114861 0.86 0.93 6266 69276
chr6 27215480 27224403 + PRSS16 ENSG00000112812.11 27215480 1.0 1.0 6267 30240
Expression level of Genes
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miRNAs possibly regulated by vista51431[chr6:27145585-27145720]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results