EnhancerDB
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  3. vista51436[chr6:27205361-27205470]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51436[chr6:27205361-27205470]
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Tissue distribution of vista51436
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Transcription factor that possibly regulate vista51436[chr6:27205361-27205470]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27204984 27205588 RPC155 UCSC Txn Factor no Conserved 108539267
chr6 27205109 27205537 ATF3 UCSC Txn Factor no Conserved 108539268
chr6 27205149 27205505 GTF3C2 UCSC Txn Factor no Conserved 108539269
chr6 27205204 27205650 TBP UCSC Txn Factor no Conserved 108539270
chr6 27205205 27205569 TEAD4 UCSC Txn Factor no Conserved 108539271
chr6 27205371 27205382 ESRRA JASPAR yes 70339318
chr6 27205371 27205382 ESRRB JASPAR yes 70339319
chr6 27205371 27205382 ESRRA JASPAR yes 100925626
chr6 27205371 27205382 ESRRB JASPAR yes 100925627
chr6 27205401 27205404 MYB TRANSFAC yes 70339320
chr6 27205401 27205404 MYB TRANSFAC yes 100925628
chr6 27205414 27205417 MYB TRANSFAC yes 70339321
chr6 27205414 27205417 MYB TRANSFAC yes 100925629
chr6 27205422 27205432 ELK1 JASPAR yes 70339322
chr6 27205422 27205432 ELK1 JASPAR yes 100925630
chr6 27205426 27205432 ETS1 JASPAR yes 70339323
chr6 27205426 27205432 ETS1 JASPAR yes 100925631
chr6 27205427 27205435 FOXO3 JASPAR yes 70339324
chr6 27205427 27205435 FOXO3 JASPAR yes 100925632
chr6 27205430 27205451 IRF1 JASPAR yes 70339325
chr6 27205430 27205451 IRF1 JASPAR yes 100925633
chr6 27205431 27205441 MYF6 JASPAR yes 70339326
chr6 27205431 27205441 MYF6 JASPAR yes 100925634
chr6 27205433 27205438 MYC TRANSFAC yes 70339327
chr6 27205433 27205438 MYC TRANSFAC yes 100925635
chr6 27205436 27205457 IRF1 JASPAR yes 70339328
chr6 27205436 27205457 IRF1 JASPAR yes 100925636
chr6 27205438 27205453 PRDM1 JASPAR yes 70339329
chr6 27205438 27205453 PRDM1 JASPAR yes 100925637
chr6 27205440 27205452 IRF1 JASPAR yes 70339330
chr6 27205440 27205452 IRF1 JASPAR yes 100925638
chr6 27205451 27205457 TBP TRANSFAC yes 70339331
chr6 27205451 27205457 TBP TRANSFAC yes 100925639
chr6 27205461 27205473 FOXI1 JASPAR yes 70339332
chr6 27205461 27205473 FOXI1 JASPAR yes 100925640
chr6 27205464 27205484 RREB1 JASPAR yes 70339333
chr6 27205464 27205484 RREB1 JASPAR yes 100925641
chr6 27205466 27205478 FOXC2 JASPAR yes 70339334
chr6 27205466 27205478 FOXC2 JASPAR yes 100925642
SNP sites on vista51436[chr6:27205361-27205470]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27205400 rs183522280 T C
ATF3 GTF3C2 RPC155 TBP TEAD4
8931211
chr6 27205422 rs13212921 C T
ATF3 ELK1 GTF3C2 RPC155 TBP TEAD4
8931212
chr6 27205435 rs13437191 A G
ATF3 FOXO3 GTF3C2 IRF1 MYC MYF6 RPC155 TBP TEAD4
8931213
chr6 27205448 rs181058040 A G,T
ATF3 GTF3C2 IRF1 PRDM1 RPC155 TBP TEAD4
8931214
Genes possibly regulated by vista51436[chr6:27205361-27205470]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27106073 27114619 - HIST1H2BK ENSG00000197903.6 27114619 0.77 0.9 6264 9258
chr6 27107076 27108418 + HIST1H4I ENSG00000198339.3 27107076 0.86 0.95 6265 1715
chr6 27114861 27115317 + HIST1H2AH ENSG00000184825.4 27114861 0.86 0.93 6266 9500
chr6 27215480 27224403 + PRSS16 ENSG00000112812.11 27215480 1.0 1.0 6267 89990
chr6 27253682 27279949 - POM121L2 ENSG00000158553.3 27279949 0.89 0.98 6268 25521
Expression level of Genes
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miRNAs possibly regulated by vista51436[chr6:27205361-27205470]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results