EnhancerDB
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  3. vista51437[chr6:27261332-27261668]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51437[chr6:27261332-27261668]
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Tissue distribution of vista51437
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Transcription factor that possibly regulate vista51437[chr6:27261332-27261668]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27261441 27261850 TBP UCSC Txn Factor no Conserved 108539272
chr6 27261450 27261890 TEAD4 UCSC Txn Factor no Conserved 108539273
chr6 27261477 27261955 RPC155 UCSC Txn Factor no Conserved 108539274
chr6 27261483 27261915 ATF3 UCSC Txn Factor no Conserved 108539275
chr6 27261515 27261871 RCOR1 UCSC Txn Factor no Conserved 108539276
chr6 27261543 27261730 BDP1 UCSC Txn Factor no Conserved 108539277
chr6 27261613 27261833 GTF3C2 UCSC Txn Factor no Conserved 108539278
chr6 27261341 27261351 POU6F2 JASPAR yes 70339335
chr6 27261341 27261351 POU6F2 JASPAR yes 100927011
chr6 27261342 27261352 GSX1 JASPAR yes 70339336
chr6 27261342 27261352 GSX2 JASPAR yes 70339337
chr6 27261342 27261352 HOXB3 JASPAR yes 70339338
chr6 27261342 27261352 POU6F1 JASPAR yes 70339339
chr6 27261342 27261352 GSX1 JASPAR yes 100927012
chr6 27261342 27261352 GSX2 JASPAR yes 100927013
chr6 27261342 27261352 HOXB3 JASPAR yes 100927014
chr6 27261342 27261352 POU6F1 JASPAR yes 100927015
chr6 27261343 27261351 NKX6-1 JASPAR yes 70339340
chr6 27261343 27261351 NKX6-2 JASPAR yes 70339341
chr6 27261343 27261351 NKX6-1 JASPAR yes 100927016
chr6 27261343 27261351 NKX6-2 JASPAR yes 100927017
chr6 27261343 27261359 POU4F2 JASPAR yes 70339342
chr6 27261343 27261359 POU4F3 JASPAR yes 70339343
chr6 27261343 27261359 POU4F2 JASPAR yes 100927018
chr6 27261343 27261359 POU4F3 JASPAR yes 100927019
chr6 27261345 27261349 YY1 TRANSFAC yes 70339344
chr6 27261345 27261349 YY1 TRANSFAC yes 100927020
chr6 27261345 27261359 POU4F1 JASPAR yes 70339345
chr6 27261345 27261359 POU4F1 JASPAR yes 100927021
chr6 27261345 27261360 HNF1A JASPAR yes 70339346
chr6 27261345 27261360 HNF1A JASPAR yes 100927022
chr6 27261346 27261359 HNF1B JASPAR yes 70339347
chr6 27261346 27261359 HNF1B JASPAR yes 100927023
chr6 27261347 27261359 HNF1B JASPAR yes 70339348
chr6 27261347 27261359 HNF1B JASPAR yes 100927024
chr6 27261351 27261355 YY1 TRANSFAC yes 70339349
chr6 27261351 27261355 YY1 TRANSFAC yes 100927025
chr6 27261363 27261374 FOS JASPAR yes 70339350
chr6 27261363 27261374 FOSL1 JASPAR yes 70339351
chr6 27261363 27261374 JUND JASPAR yes 70339352
chr6 27261363 27261374 FOS JASPAR yes 100927026
chr6 27261363 27261374 FOSL1 JASPAR yes 100927027
chr6 27261363 27261374 JUND JASPAR yes 100927028
chr6 27261364 27261378 JUN JASPAR yes 70339353
chr6 27261364 27261378 JUN JASPAR yes 100927029
chr6 27261377 27261395 TP63 JASPAR yes 70339354
chr6 27261377 27261395 TP73 JASPAR yes 70339355
chr6 27261377 27261395 TP63 JASPAR yes 100927030
chr6 27261377 27261395 TP73 JASPAR yes 100927031
chr6 27261378 27261393 TP53 JASPAR yes 70339356
chr6 27261378 27261393 TP53 JASPAR yes 100927032
chr6 27261386 27261396 SMAD3 JASPAR yes 70339357
chr6 27261386 27261396 SMAD3 JASPAR yes 100927033
chr6 27261411 27261422 FOXB1 JASPAR yes 70339358
chr6 27261411 27261422 FOXC1 JASPAR yes 70339359
chr6 27261411 27261422 FOXB1 JASPAR yes 100927034
chr6 27261411 27261422 FOXC1 JASPAR yes 100927035
chr6 27261411 27261423 POU3F1 JASPAR yes 70339360
chr6 27261411 27261423 POU3F2 JASPAR yes 70339361
chr6 27261411 27261423 POU3F1 JASPAR yes 100927036
chr6 27261411 27261423 POU3F2 JASPAR yes 100927037
chr6 27261411 27261424 POU3F3 JASPAR yes 70339362
chr6 27261411 27261424 POU3F3 JASPAR yes 100927038
chr6 27261412 27261416 YY1 TRANSFAC yes 70339363
chr6 27261412 27261416 YY1 TRANSFAC yes 100927039
chr6 27261412 27261422 NFATC3 JASPAR yes 70339364
chr6 27261412 27261422 NFATC3 JASPAR yes 100927040
chr6 27261412 27261424 POU2F1 JASPAR yes 70339365
chr6 27261412 27261424 POU2F1 JASPAR yes 100927041
chr6 27261413 27261422 POU3F4 JASPAR yes 70339366
chr6 27261413 27261422 POU5F1B JASPAR yes 70339367
chr6 27261413 27261422 POU3F4 JASPAR yes 100927042
chr6 27261413 27261422 POU5F1B JASPAR yes 100927043
chr6 27261433 27261437 YY1 TRANSFAC yes 70339368
chr6 27261433 27261437 YY1 TRANSFAC yes 100927044
chr6 27261458 27261472 SPIC JASPAR yes 70339369
chr6 27261458 27261472 SPIC JASPAR yes 100927045
chr6 27261463 27261477 TCF7L2 JASPAR yes 70339370
chr6 27261463 27261477 TCF7L2 JASPAR yes 100927046
chr6 27261483 27261495 YY1 JASPAR yes 70339371
chr6 27261483 27261495 YY1 JASPAR yes 100927047
chr6 27261488 27261492 YY1 TRANSFAC yes 70339372
chr6 27261488 27261492 YY1 TRANSFAC yes 100927048
chr6 27261495 27261501 LEF1 TRANSFAC yes 70339373
chr6 27261495 27261501 SOX10 JASPAR yes 70339374
chr6 27261495 27261501 LEF1 TRANSFAC yes 100927049
chr6 27261495 27261501 SOX10 JASPAR yes 100927050
chr6 27261510 27261521 ETV2 JASPAR yes 70339375
chr6 27261510 27261521 ETV2 JASPAR yes 100927051
chr6 27261511 27261518 SPIB JASPAR yes 70339376
chr6 27261511 27261518 SPIB JASPAR yes 100927052
chr6 27261512 27261520 FEV JASPAR yes 70339377
chr6 27261512 27261520 FEV JASPAR yes 100927053
chr6 27261527 27261531 YY1 TRANSFAC yes 70339378
chr6 27261527 27261531 YY1 TRANSFAC yes 100927054
chr6 27261550 27261565 SOX21 JASPAR yes 70339379
chr6 27261550 27261565 SOX21 JASPAR yes 100927055
chr6 27261550 27261566 SOX4 JASPAR yes 70339380
chr6 27261550 27261566 SOX4 JASPAR yes 100927056
chr6 27261615 27261625 SP1 JASPAR yes 70339381
chr6 27261615 27261625 SP1 JASPAR yes 100927057
chr6 27261629 27261639 GCM2 JASPAR yes 70339382
chr6 27261629 27261639 GCM2 JASPAR yes 100927058
chr6 27261629 27261640 GCM1 JASPAR yes 70339383
chr6 27261629 27261640 GCM1 JASPAR yes 100927059
chr6 27261644 27261656 IRF1 JASPAR yes 70339384
chr6 27261644 27261656 IRF1 JASPAR yes 100927060
chr6 27261646 27261649 MYB TRANSFAC yes 70339385
chr6 27261646 27261649 MYB TRANSFAC yes 100927061
chr6 27261661 27261671 RUNX3 JASPAR yes 70339386
chr6 27261661 27261671 RUNX3 JASPAR yes 100927062
SNP sites on vista51437[chr6:27261332-27261668]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27261377 rs116044476 C T
JUN TP63 TP73
8931360
chr6 27261504 rs187808247 T C
ATF3 RPC155 TBP TEAD4
8931361
chr6 27261557 rs75858125 G A
ATF3 BDP1 RCOR1 RPC155 SOX21 SOX4 TBP TEAD4
8931362
chr6 27261643 rs11969536 T C,G
ATF3 BDP1 GTF3C2 RCOR1 RPC155 TBP TEAD4
8931363
chr6 27261655 rs16897330 G A
ATF3 BDP1 GTF3C2 IRF1 RCOR1 RPC155 TBP TEAD4
8931364
chr6 27261661 rs72839449 A C
ATF3 BDP1 GTF3C2 RCOR1 RPC155 RUNX3 TBP TEAD4
8931365
chr6 27261664 rs114673542 T C
ATF3 BDP1 GTF3C2 RCOR1 RPC155 RUNX3 TBP TEAD4
8931366
chr6 27261666 rs115666557 C A,T
ATF3 BDP1 GTF3C2 RCOR1 RPC155 RUNX3 TBP TEAD4
8931367
Genes possibly regulated by vista51437[chr6:27261332-27261668]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27215480 27224403 + PRSS16 ENSG00000112812.11 27215480 1.0 1.0 6267 54148
chr6 27253682 27279949 - POM121L2 ENSG00000158553.3 27279949 0.89 0.98 6268 81719
chr6 27342394 27371683 + ZNF391 ENSG00000124613.4 27342394 0.83 0.99 6269 19274
Expression level of Genes
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miRNAs possibly regulated by vista51437[chr6:27261332-27261668]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results