EnhancerDB
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  3. vista51440[chr6:27416333-27416557]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51440[chr6:27416333-27416557]
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Tissue distribution of vista51440
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Transcription factor that possibly regulate vista51440[chr6:27416333-27416557]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27416348 27416363 JUND JASPAR yes 70339477
chr6 27416349 27416362 JUN JASPAR yes 70339478
chr6 27416350 27416358 CREB1 JASPAR yes 70339479
chr6 27416402 27416408 NFIC JASPAR yes 70339480
chr6 27416411 27416419 GATA1 TRANSFAC yes 70339481
chr6 27416414 27416418 NFE TRANSFAC yes 70339482
chr6 27416414 27416419 GATA1 TRANSFAC yes 70339483
chr6 27416414 27416420 GATA3 JASPAR yes 70339484
chr6 27416422 27416427 GATA2 JASPAR yes 70339485
chr6 27416422 27416437 SCRT1 JASPAR yes 70339486
chr6 27416424 27416437 SCRT2 JASPAR yes 70339487
chr6 27416446 27416457 STAT3 JASPAR yes 70339488
chr6 27416448 27416460 TEAD1 JASPAR yes 70339489
chr6 27416450 27416460 TEAD1 JASPAR yes 70339490
chr6 27416450 27416460 TEAD4 JASPAR yes 70339491
chr6 27416451 27416459 TEAD3 JASPAR yes 70339492
chr6 27416459 27416464 GATA2 JASPAR yes 70339493
chr6 27416486 27416491 ETS2 TRANSFAC yes 70339494
chr6 27416509 27416527 NFYA JASPAR yes 70339495
chr6 27416513 27416517 H1TF2 TRANSFAC yes 70339496
chr6 27416513 27416517 NFE TRANSFAC yes 70339497
chr6 27416513 27416517 SRF TRANSFAC yes 70339498
chr6 27416515 27416529 XBP1 JASPAR yes 70339499
chr6 27416522 27416532 HOXB3 JASPAR yes 70339500
chr6 27416523 27416539 POU4F2 JASPAR yes 70339501
chr6 27416523 27416539 POU4F3 JASPAR yes 70339502
chr6 27416525 27416529 YY1 TRANSFAC yes 70339503
chr6 27416525 27416539 POU4F1 JASPAR yes 70339504
chr6 27416529 27416535 HiNF-A TRANSFAC yes 70339505
chr6 27416533 27416554 IRF1 JASPAR yes 70339506
chr6 27416536 27416540 YY1 TRANSFAC yes 70339507
chr6 27416536 27416547 ETV2 JASPAR yes 70339508
chr6 27416536 27416549 ELF1 JASPAR yes 70339509
chr6 27416536 27416550 SPIC JASPAR yes 70339510
chr6 27416537 27416545 FEV JASPAR yes 70339511
chr6 27416539 27416544 ETS2 TRANSFAC yes 70339512
SNP sites on vista51440[chr6:27416333-27416557]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27416453 rs575157667 G A
STAT3 TEAD1 TEAD3 TEAD4
8931763
chr6 27416543 rs10603749 CT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931764
chr6 27416543 rs528993627 CTTT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931765
chr6 27416543 rs531301213 CTT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931766
chr6 27416543 rs533850700 CT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931767
chr6 27416543 rs536342373 C CT
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931768
chr6 27416543 rs761099378 CTT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931769
chr6 27416543 rs773596273 CT C
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931770
chr6 27416543 rs796138810 C CT
ELF1 ETS2 ETV2 FEV IRF1 SPIC
8931771
Genes possibly regulated by vista51440[chr6:27416333-27416557]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27342394 27371683 + ZNF391 ENSG00000124613.4 27342394 0.83 0.99 6269 26061
chr6 27418522 27440897 - ZNF184 ENSG00000096654.11 27440897 0.71 0.99 6270 75660
Expression level of Genes
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miRNAs possibly regulated by vista51440[chr6:27416333-27416557]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results