EnhancerDB
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  3. vista51441[chr6:27446506-27447382]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51441[chr6:27446506-27447382]
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Tissue distribution of vista51441
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Transcription factor that possibly regulate vista51441[chr6:27446506-27447382]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27446344 27446784 TEAD4 UCSC Txn Factor no Conserved 108539284
chr6 27446364 27446794 TBP UCSC Txn Factor no Conserved 108539285
chr6 27446390 27446980 RPC155 UCSC Txn Factor no Conserved 108539286
chr6 27446416 27446919 ATF3 UCSC Txn Factor no Conserved 108539287
chr6 27446431 27446656 BDP1 UCSC Txn Factor no Conserved 108539288
chr6 27446519 27446875 GTF3C2 UCSC Txn Factor no Conserved 108539289
chr6 27447184 27447639 TBP UCSC Txn Factor no Conserved 108539290
chr6 27447222 27447746 RPC155 UCSC Txn Factor no Conserved 108539291
chr6 27447224 27447664 TEAD4 UCSC Txn Factor no Conserved 108539292
chr6 27447262 27447702 ATF3 UCSC Txn Factor no Conserved 108539293
chr6 27447309 27447510 BDP1 UCSC Txn Factor no Conserved 108539294
chr6 27447317 27447648 MYBL2 UCSC Txn Factor no Conserved 108539295
chr6 27446508 27446512 YY1 TRANSFAC yes 70339513
chr6 27446510 27446516 TCF4 TRANSFAC yes 70339514
chr6 27446633 27446644 NFKB1 JASPAR yes 70339515
chr6 27446633 27446646 NFKB2 JASPAR yes 70339516
chr6 27446644 27446655 NRF1 JASPAR yes 70339517
chr6 27446662 27446679 ZNF410 JASPAR yes 70339518
chr6 27446698 27446706 FEV JASPAR yes 70339519
chr6 27446710 27446731 IRF1 JASPAR yes 70339520
chr6 27446714 27446728 IRF7 JASPAR yes 70339521
chr6 27446715 27446719 YY1 TRANSFAC yes 70339522
chr6 27446715 27446733 IRF2 JASPAR yes 70339523
chr6 27446716 27446737 IRF1 JASPAR yes 70339524
chr6 27446718 27446733 STAT2 JASPAR yes 70339525
chr6 27446720 27446732 IRF1 JASPAR yes 70339526
chr6 27446720 27446734 IRF7 JASPAR yes 70339527
chr6 27446720 27446734 IRF8 JASPAR yes 70339528
chr6 27446720 27446735 IRF9 JASPAR yes 70339529
chr6 27446764 27446776 PKNOX2 JASPAR yes 70339530
chr6 27446771 27446774 MYB TRANSFAC yes 70339531
chr6 27446824 27446835 ETV2 JASPAR yes 70339532
chr6 27446825 27446832 SPIB JASPAR yes 70339533
chr6 27446826 27446834 FEV JASPAR yes 70339534
chr6 27446838 27446859 IRF1 JASPAR yes 70339535
chr6 27446839 27446854 FOXA1 JASPAR yes 70339536
chr6 27446842 27446853 FOXB1 JASPAR yes 70339537
chr6 27446842 27446853 FOXC1 JASPAR yes 70339538
chr6 27446842 27446856 IRF7 JASPAR yes 70339539
chr6 27446843 27446847 YY1 TRANSFAC yes 70339540
chr6 27446843 27446854 FOXA1 JASPAR yes 70339541
chr6 27446843 27446861 IRF2 JASPAR yes 70339542
chr6 27446844 27446865 IRF1 JASPAR yes 70339543
chr6 27446846 27446861 STAT2 JASPAR yes 70339544
chr6 27446848 27446860 IRF1 JASPAR yes 70339545
chr6 27446848 27446862 IRF7 JASPAR yes 70339546
chr6 27446848 27446862 IRF8 JASPAR yes 70339547
chr6 27446848 27446863 IRF9 JASPAR yes 70339548
chr6 27446866 27446871 ETS2 TRANSFAC yes 70339549
chr6 27446893 27446902 NKX3-2 JASPAR yes 70339550
chr6 27446893 27446903 NKX2-3 JASPAR yes 70339551
chr6 27446894 27446902 ISL2 JASPAR yes 70339552
chr6 27446898 27446915 RXRA JASPAR yes 70339553
chr6 27446899 27446902 MYB TRANSFAC yes 70339554
chr6 27446940 27446955 AR JASPAR yes 70339555
chr6 27446948 27446955 SPIB JASPAR yes 70339556
chr6 27446958 27446962 YY1 TRANSFAC yes 70339557
chr6 27446969 27446980 ETV2 JASPAR yes 70339558
chr6 27446970 27446977 SPIB JASPAR yes 70339559
chr6 27446971 27446979 FEV JASPAR yes 70339560
chr6 27446983 27447004 IRF1 JASPAR yes 70339561
chr6 27446984 27446999 FOXA1 JASPAR yes 70339562
chr6 27446987 27446998 FOXB1 JASPAR yes 70339563
chr6 27446987 27446998 FOXC1 JASPAR yes 70339564
chr6 27446987 27447001 IRF7 JASPAR yes 70339565
chr6 27446988 27446992 YY1 TRANSFAC yes 70339566
chr6 27446988 27446999 FOXA1 JASPAR yes 70339567
chr6 27446988 27447006 IRF2 JASPAR yes 70339568
chr6 27446989 27447010 IRF1 JASPAR yes 70339569
chr6 27446991 27447006 STAT2 JASPAR yes 70339570
chr6 27446993 27447005 IRF1 JASPAR yes 70339571
chr6 27446993 27447007 IRF7 JASPAR yes 70339572
chr6 27446993 27447007 IRF8 JASPAR yes 70339573
chr6 27446993 27447008 IRF9 JASPAR yes 70339574
chr6 27446999 27447011 INSM1 JASPAR yes 70339575
chr6 27447038 27447048 NKX2-3 JASPAR yes 70339576
chr6 27447039 27447048 NKX2-8 JASPAR yes 70339577
chr6 27447054 27447068 NR2F1 JASPAR yes 70339578
chr6 27447057 27447072 MEF2C JASPAR yes 70339579
chr6 27447058 27447073 MEF2A JASPAR yes 70339580
chr6 27447059 27447071 MEF2A JASPAR yes 70339581
chr6 27447059 27447071 MEF2D JASPAR yes 70339582
chr6 27447081 27447089 GATA3 JASPAR yes 70339583
chr6 27447082 27447096 ONECUT2 JASPAR yes 70339584
chr6 27447082 27447096 ONECUT3 JASPAR yes 70339585
chr6 27447088 27447092 YY1 TRANSFAC yes 70339586
chr6 27447092 27447099 JUN TRANSFAC yes 70339587
chr6 27447116 27447120 H4TF2 TRANSFAC yes 70339588
chr6 27447118 27447126 TBX15 JASPAR yes 70339589
chr6 27447121 27447135 SPI1 JASPAR yes 70339590
chr6 27447129 27447142 ELF1 JASPAR yes 70339591
chr6 27447135 27447139 NFE TRANSFAC yes 70339592
chr6 27447173 27447176 MYB TRANSFAC yes 70339593
chr6 27447182 27447199 BCL6B JASPAR yes 70339594
chr6 27447217 27447223 ETS1 JASPAR yes 70339595
chr6 27447227 27447233 ATF1 TRANSFAC yes 70339596
chr6 27447233 27447239 SOX10 JASPAR yes 70339597
chr6 27447270 27447281 NFE2L2 JASPAR yes 70339598
chr6 27447273 27447279 SOX10 JASPAR yes 70339599
chr6 27447282 27447294 TEAD1 JASPAR yes 70339600
chr6 27447287 27447308 ZNF263 JASPAR yes 70339601
chr6 27447288 27447309 ZNF263 JASPAR yes 70339602
chr6 27447290 27447304 SPI1 JASPAR yes 70339603
chr6 27447291 27447312 ZNF263 JASPAR yes 70339604
chr6 27447294 27447300 PEA3 TRANSFAC yes 70339605
chr6 27447320 27447325 SP1 TRANSFAC yes 70339606
chr6 27447354 27447358 YY1 TRANSFAC yes 70339607
chr6 27447360 27447370 MZF1 JASPAR yes 70339608
chr6 27447368 27447378 TBX21 JASPAR yes 70339609
chr6 27447368 27447381 EOMES JASPAR yes 70339610
chr6 27447369 27447377 MGA JASPAR yes 70339611
chr6 27447369 27447377 TBX1 JASPAR yes 70339612
SNP sites on vista51441[chr6:27446506-27447382]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27446562 rs201915141 AAG A
ATF3 BDP1 GTF3C2 RPC155 TBP TEAD4
8931803
chr6 27446566 rs7749305 T A,C
ATF3 BDP1 GTF3C2 RPC155 TBP TEAD4
8931804
chr6 27446596 rs192190937 C T
ATF3 BDP1 GTF3C2 RPC155 TBP TEAD4
8931805
chr6 27446603 rs560586012 G C
ATF3 BDP1 GTF3C2 RPC155 TBP TEAD4
8931806
chr6 27446642 rs112066464 C G,T
ATF3 BDP1 GTF3C2 NFKB1 NFKB2 RPC155 TBP TEAD4
8931807
chr6 27446669 rs181367571 T A,G
ATF3 GTF3C2 RPC155 TBP TEAD4 ZNF410
8931808
chr6 27446727 rs187412655 A G
ATF3 GTF3C2 IRF1 IRF2 IRF7 IRF8 IRF9 RPC155 STAT2 TBP TEAD4
8931809
chr6 27446785 rs146214685 A G
ATF3 GTF3C2 RPC155 TBP
8931810
chr6 27446791 rs112148137 G T
ATF3 GTF3C2 RPC155 TBP
8931811
chr6 27447242 rs538706487 G C
RPC155 TBP TEAD4
8931812
chr6 27447253 rs141651116 G A
RPC155 TBP TEAD4
8931813
chr6 27447296 rs12215117 G A
ATF3 PEA3 RPC155 SPI1 TBP TEAD4 ZNF263
8931814
chr6 27447345 rs9468137 G A,T
ATF3 BDP1 MYBL2 RPC155 TBP TEAD4
8931815
chr6 27447371 rs536379589 CGT C
ATF3 BDP1 EOMES MGA MYBL2 RPC155 TBP TBX1 TBX21 TEAD4
8931816
Genes possibly regulated by vista51441[chr6:27446506-27447382]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27418522 27440897 - ZNF184 ENSG00000096654.11 27440897 0.71 0.99 6270 94391
Expression level of Genes
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miRNAs possibly regulated by vista51441[chr6:27446506-27447382]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results