EnhancerDB
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  3. vista51442[chr6:27513313-27513537]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51442[chr6:27513313-27513537]
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Tissue distribution of vista51442
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Transcription factor that possibly regulate vista51442[chr6:27513313-27513537]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27513205 27513657 TBP UCSC Txn Factor no Conserved 108539296
chr6 27513229 27513669 TEAD4 UCSC Txn Factor no Conserved 108539297
chr6 27513245 27513936 RPC155 UCSC Txn Factor no Conserved 108539298
chr6 27513281 27513778 ATF3 UCSC Txn Factor no Conserved 108539299
chr6 27513310 27513527 BDP1 UCSC Txn Factor no Conserved 108539300
chr6 27513334 27513681 MYBL2 UCSC Txn Factor no Conserved 108539301
chr6 27513428 27513675 GTF3C2 UCSC Txn Factor no Conserved 108539302
chr6 27513308 27513319 CEBPB JASPAR yes 70339613
chr6 27513308 27513319 CEBPB JASPAR yes 100934651
chr6 27513309 27513320 CEBPA JASPAR yes 70339614
chr6 27513309 27513320 CEBPA JASPAR yes 100934652
chr6 27513320 27513335 AR JASPAR yes 70339615
chr6 27513320 27513335 AR JASPAR yes 100934653
chr6 27513403 27513407 YY1 TRANSFAC yes 70339616
chr6 27513403 27513407 YY1 TRANSFAC yes 100934654
chr6 27513405 27513411 ETS1 JASPAR yes 70339617
chr6 27513405 27513411 ETS1 JASPAR yes 100934655
chr6 27513426 27513430 YY1 TRANSFAC yes 70339618
chr6 27513426 27513430 YY1 TRANSFAC yes 100934656
chr6 27513429 27513433 TEAD2 TRANSFAC yes 70339619
chr6 27513429 27513433 TEAD2 TRANSFAC yes 100934657
chr6 27513435 27513445 SREBF2 JASPAR yes 70339620
chr6 27513435 27513445 SREBF2 JASPAR yes 100934658
chr6 27513453 27513459 YY1 JASPAR yes 70339621
chr6 27513453 27513459 YY1 JASPAR yes 100934659
chr6 27513510 27513520 RELA JASPAR yes 70339622
chr6 27513510 27513520 REL JASPAR yes 70339623
chr6 27513510 27513520 RELA JASPAR yes 100934660
chr6 27513510 27513520 REL JASPAR yes 100934661
chr6 27513510 27513521 NFKB1 JASPAR yes 70339624
chr6 27513510 27513521 NFKB1 JASPAR yes 100934662
chr6 27513510 27513523 NFKB1 JASPAR yes 70339625
chr6 27513510 27513523 NFKB2 JASPAR yes 70339626
chr6 27513510 27513523 NFKB1 JASPAR yes 100934663
chr6 27513510 27513523 NFKB2 JASPAR yes 100934664
chr6 27513511 27513521 NFKB1 JASPAR yes 70339627
chr6 27513511 27513521 RELA JASPAR yes 70339628
chr6 27513511 27513521 NFKB1 JASPAR yes 100934665
chr6 27513511 27513521 RELA JASPAR yes 100934666
chr6 27513511 27513522 NFKB1 JASPAR yes 70339629
chr6 27513511 27513522 NFKB1 JASPAR yes 100934667
chr6 27513521 27513532 NRF1 JASPAR yes 70339630
chr6 27513521 27513532 NRF1 JASPAR yes 100934668
SNP sites on vista51442[chr6:27513313-27513537]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27513387 rs182456554 C G
ATF3 BDP1 MYBL2 RPC155 TBP TEAD4
8932202
chr6 27513440 rs535576169 C T
ATF3 BDP1 GTF3C2 MYBL2 RPC155 SREBF2 TBP TEAD4
8932203
chr6 27513454 rs139667824 G A,T
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4 YY1
8932204
chr6 27513456 rs149499541 T C,G
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4 YY1
8932205
chr6 27513459 rs143978065 C G,T
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4 YY1
8932206
chr6 27513460 rs79018549 G A,T
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4
8932207
chr6 27513465 rs549623298 T C
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4
8932208
chr6 27513498 rs148637877 A G
ATF3 BDP1 GTF3C2 MYBL2 RPC155 TBP TEAD4
8932209
chr6 27513511 rs373271921 T C,G
ATF3 BDP1 GTF3C2 MYBL2 NFKB1 NFKB2 REL RELA RPC155 TBP TEAD4
8932210
Genes possibly regulated by vista51442[chr6:27513313-27513537]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27418522 27440897 - ZNF184 ENSG00000096654.11 27440897 0.71 0.99 6270 27584
Expression level of Genes
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miRNAs possibly regulated by vista51442[chr6:27513313-27513537]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results