EnhancerDB
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  3. vista51443[chr6:27585757-27586130]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51443[chr6:27585757-27586130]
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Tissue distribution of vista51443
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Transcription factor that possibly regulate vista51443[chr6:27585757-27586130]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27585323 27585872 CTCF UCSC Txn Factor no Conserved 108539303
chr6 27585912 27586321 TBP UCSC Txn Factor no Conserved 108539304
chr6 27585915 27586406 RPC155 UCSC Txn Factor no Conserved 108539305
chr6 27585946 27586216 BDP1 UCSC Txn Factor no Conserved 108539306
chr6 27585967 27586354 ATF3 UCSC Txn Factor no Conserved 108539307
chr6 27585775 27585789 SPI1 JASPAR yes 70339631
chr6 27585775 27585789 SPIC JASPAR yes 70339632
chr6 27585777 27585783 NFE2 TRANSFAC yes 70339633
chr6 27585783 27585798 FOXP1 JASPAR yes 70339634
chr6 27585792 27585796 NFE TRANSFAC yes 70339635
chr6 27585792 27585805 SMAD2 JASPAR yes 70339636
chr6 27585793 27585810 ESR1 JASPAR yes 70339637
chr6 27585797 27585811 RXRB JASPAR yes 70339638
chr6 27585797 27585811 RXRG JASPAR yes 70339639
chr6 27585797 27585812 NR2C2 JASPAR yes 70339640
chr6 27585807 27585816 ZEB1 JASPAR yes 70339641
chr6 27585807 27585819 PKNOX1 JASPAR yes 70339642
chr6 27585807 27585819 PKNOX2 JASPAR yes 70339643
chr6 27585810 27585815 USF2 TRANSFAC yes 70339644
chr6 27585813 27585817 NFE TRANSFAC yes 70339645
chr6 27585832 27585842 HOXC10 JASPAR yes 70339646
chr6 27585832 27585842 HOXD11 JASPAR yes 70339647
chr6 27585832 27585843 HOXC11 JASPAR yes 70339648
chr6 27585832 27585843 HOXD12 JASPAR yes 70339649
chr6 27585833 27585844 CDX2 JASPAR yes 70339650
chr6 27585840 27585852 E2F8 JASPAR yes 70339651
chr6 27585871 27585883 E2F8 JASPAR yes 70339652
chr6 27585874 27585886 TFAP2A JASPAR yes 70339653
chr6 27585874 27585886 TFAP2B JASPAR yes 70339654
chr6 27585874 27585886 TFAP2C JASPAR yes 70339655
chr6 27585908 27585917 HIC2 JASPAR yes 70339656
chr6 27585911 27585915 LFA1 TRANSFAC yes 70339657
chr6 27585914 27585918 YY1 TRANSFAC yes 70339658
chr6 27585956 27585959 MYB TRANSFAC yes 70339659
chr6 27585956 27585965 SOX9 JASPAR yes 70339660
chr6 27585962 27585976 TLX1 JASPAR yes 70339661
chr6 27585966 27585984 NFYA JASPAR yes 70339662
chr6 27585971 27585981 ALX3 JASPAR yes 70339663
chr6 27585971 27585981 EN2 JASPAR yes 70339664
chr6 27585971 27585981 ESX1 JASPAR yes 70339665
chr6 27585971 27585981 GBX1 JASPAR yes 70339666
chr6 27585971 27585981 GBX2 JASPAR yes 70339667
chr6 27585971 27585981 HESX1 JASPAR yes 70339668
chr6 27585971 27585981 LBX2 JASPAR yes 70339669
chr6 27585971 27585981 MIXL1 JASPAR yes 70339670
chr6 27585971 27585981 RAX JASPAR yes 70339671
chr6 27585972 27585980 BARX1 JASPAR yes 70339672
chr6 27585972 27585980 BSX JASPAR yes 70339673
chr6 27585972 27585980 EN1 JASPAR yes 70339674
chr6 27585972 27585980 ISX JASPAR yes 70339675
chr6 27585972 27585980 LHX9 JASPAR yes 70339676
chr6 27585972 27585980 MSX1 JASPAR yes 70339677
chr6 27585972 27585980 MSX2 JASPAR yes 70339678
chr6 27585972 27585980 PRRX1 JASPAR yes 70339679
chr6 27585972 27585980 RAX2 JASPAR yes 70339680
chr6 27585972 27585980 SHOX JASPAR yes 70339681
chr6 27586037 27586051 SPI1 JASPAR yes 70339682
chr6 27586043 27586049 ETS1 JASPAR yes 70339683
chr6 27586043 27586049 SPI1 JASPAR yes 70339684
chr6 27586044 27586065 ZNF263 JASPAR yes 70339685
chr6 27586046 27586057 E2F6 JASPAR yes 70339686
chr6 27586053 27586067 IRF7 JASPAR yes 70339687
chr6 27586055 27586067 IRF1 JASPAR yes 70339688
chr6 27586056 27586077 MAFG JASPAR yes 70339689
chr6 27586057 27586070 POU2F2 JASPAR yes 70339690
chr6 27586061 27586079 MAFF JASPAR yes 70339691
chr6 27586062 27586077 MAFK JASPAR yes 70339692
chr6 27586074 27586088 RORA JASPAR yes 70339693
chr6 27586085 27586100 PRDM1 JASPAR yes 70339694
chr6 27586108 27586115 SPIB JASPAR yes 70339695
SNP sites on vista51443[chr6:27585757-27586130]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27585799 rs9468175 C A
CTCF ESR1 NR2C2 RXRB RXRG SMAD2
8932654
chr6 27585886 rs367848453 G T
TFAP2A TFAP2B TFAP2C
8932655
chr6 27585957 rs567546359 T C
BDP1 MYB RPC155 SOX9 TBP
8932656
chr6 27586083 rs55713702 G A,T
ATF3 BDP1 RORA RPC155 TBP
8932657
chr6 27586120 rs55755099 G A
ATF3 BDP1 RPC155 TBP
8932658
chr6 27586122 rs9368516 T C
ATF3 BDP1 RPC155 TBP
8932659
chr6 27586123 rs16867879 C A,G,T
ATF3 BDP1 RPC155 TBP
8932660
chr6 27586126 rs575967721 T A,C,G
ATF3 BDP1 RPC155 TBP
8932661
chr6 27586128 rs146873429 C A,G,T
ATF3 BDP1 RPC155 TBP
8932662
Genes possibly regulated by vista51443[chr6:27585757-27586130]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista51443[chr6:27585757-27586130]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results