EnhancerDB
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  3. vista51447[chr6:27640311-27640352]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51447[chr6:27640311-27640352]
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Tissue distribution of vista51447
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Transcription factor that possibly regulate vista51447[chr6:27640311-27640352]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27639873 27640507 RPC155 UCSC Txn Factor no Conserved 108539309
chr6 27639936 27640476 ATF3 UCSC Txn Factor no Conserved 108539310
chr6 27639988 27640427 MYBL2 UCSC Txn Factor no Conserved 108539311
chr6 27640038 27640411 YY1 UCSC Txn Factor no Conserved 108539312
chr6 27640055 27640529 TBP UCSC Txn Factor no Conserved 108539313
chr6 27640079 27640435 GTF3C2 UCSC Txn Factor no Conserved 108539314
chr6 27640123 27640459 E2F4 UCSC Txn Factor no Conserved 108539315
chr6 27640221 27640491 BDP1 UCSC Txn Factor no Conserved 108539316
chr6 27640315 27640336 IRF1 JASPAR yes 70339748
chr6 27640315 27640336 IRF1 JASPAR yes 100943312
chr6 27640317 27640332 STAT2 JASPAR yes 70339749
chr6 27640317 27640332 STAT2 JASPAR yes 100943313
chr6 27640322 27640328 TCF4 TRANSFAC yes 70339750
chr6 27640322 27640328 TCF4 TRANSFAC yes 100943314
chr6 27640331 27640338 SPIB JASPAR yes 70339751
chr6 27640331 27640338 SPIB JASPAR yes 100943315
chr6 27640331 27640342 FLI1 JASPAR yes 70339752
chr6 27640331 27640342 FLI1 JASPAR yes 100943316
chr6 27640332 27640340 EHF JASPAR yes 70339753
chr6 27640332 27640340 EHF JASPAR yes 100943317
chr6 27640333 27640340 SPI1 JASPAR yes 70339754
chr6 27640333 27640340 SPI1 JASPAR yes 100943318
SNP sites on vista51447[chr6:27640311-27640352]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27640334 rs139274398 A T
ATF3 BDP1 E2F4 EHF FLI1 GTF3C2 IRF1 MYBL2 RPC155 SPI1 SPIB TBP YY1
8933045
Genes possibly regulated by vista51447[chr6:27640311-27640352]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista51447[chr6:27640311-27640352]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results