EnhancerDB
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  3. vista51448[chr6:27655152-27655475]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51448[chr6:27655152-27655475]
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Tissue distribution of vista51448
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Transcription factor that possibly regulate vista51448[chr6:27655152-27655475]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27655208 27655559 CTCF UCSC Txn Factor no Conserved 108539317
chr6 27655231 27655508 RAD21 UCSC Txn Factor no Conserved 108539318
chr6 27655237 27655515 SMC3 UCSC Txn Factor no Conserved 108539319
chr6 27655248 27655529 RUNX3 UCSC Txn Factor no Conserved 108539320
chr6 27655141 27655154 EOMES JASPAR yes 70339755
chr6 27655141 27655154 EOMES JASPAR yes 100944672
chr6 27655143 27655153 TBR1 JASPAR yes 70339756
chr6 27655143 27655153 TBR1 JASPAR yes 100944673
chr6 27655143 27655154 TBX2 JASPAR yes 70339757
chr6 27655143 27655154 TBX2 JASPAR yes 100944674
chr6 27655151 27655162 FLI1 JASPAR yes 70339758
chr6 27655151 27655162 FLI1 JASPAR yes 100944675
chr6 27655155 27655162 SPIB JASPAR yes 70339759
chr6 27655155 27655162 SPIB JASPAR yes 100944676
chr6 27655177 27655198 ZNF263 JASPAR yes 70339760
chr6 27655177 27655198 ZNF263 JASPAR yes 100944677
chr6 27655185 27655195 SP1 JASPAR yes 70339761
chr6 27655185 27655195 SP1 JASPAR yes 100944678
chr6 27655186 27655207 ZNF263 JASPAR yes 70339762
chr6 27655186 27655207 ZNF263 JASPAR yes 100944679
chr6 27655210 27655215 H4TF1 TRANSFAC yes 70339763
chr6 27655210 27655215 H4TF1 TRANSFAC yes 100944680
chr6 27655216 27655228 E2F8 JASPAR yes 70339764
chr6 27655216 27655228 E2F8 JASPAR yes 100944681
chr6 27655240 27655254 FOXF2 JASPAR yes 70339765
chr6 27655240 27655254 FOXF2 JASPAR yes 100944682
chr6 27655245 27655252 FOXD2 JASPAR yes 70339766
chr6 27655245 27655252 FOXI1 JASPAR yes 70339767
chr6 27655245 27655252 FOXL1 JASPAR yes 70339768
chr6 27655245 27655252 FOXO4 JASPAR yes 70339769
chr6 27655245 27655252 FOXO6 JASPAR yes 70339770
chr6 27655245 27655252 FOXP3 JASPAR yes 70339771
chr6 27655245 27655252 FOXD2 JASPAR yes 100944683
chr6 27655245 27655252 FOXI1 JASPAR yes 100944684
chr6 27655245 27655252 FOXL1 JASPAR yes 100944685
chr6 27655245 27655252 FOXO4 JASPAR yes 100944686
chr6 27655245 27655252 FOXO6 JASPAR yes 100944687
chr6 27655245 27655252 FOXP3 JASPAR yes 100944688
chr6 27655245 27655253 FOXD1 JASPAR yes 70339772
chr6 27655245 27655253 FOXG1 JASPAR yes 70339773
chr6 27655245 27655253 FOXO3 JASPAR yes 70339774
chr6 27655245 27655253 FOXD1 JASPAR yes 100944689
chr6 27655245 27655253 FOXG1 JASPAR yes 100944690
chr6 27655245 27655253 FOXO3 JASPAR yes 100944691
chr6 27655261 27655271 GSC JASPAR yes 70339775
chr6 27655261 27655271 GSC JASPAR yes 100944692
chr6 27655265 27655280 SOX21 JASPAR yes 70339776
chr6 27655265 27655280 SOX21 JASPAR yes 100944693
chr6 27655274 27655283 SRY JASPAR yes 70339777
chr6 27655274 27655283 SRY JASPAR yes 100944694
chr6 27655274 27655294 RREB1 JASPAR yes 70339778
chr6 27655274 27655294 RREB1 JASPAR yes 100944695
chr6 27655290 27655311 REST JASPAR yes 70339779
chr6 27655290 27655311 REST JASPAR yes 100944696
chr6 27655294 27655298 NFE TRANSFAC yes 70339780
chr6 27655294 27655298 NFE TRANSFAC yes 100944697
chr6 27655302 27655323 ZNF263 JASPAR yes 70339781
chr6 27655302 27655323 ZNF263 JASPAR yes 100944698
chr6 27655310 27655319 THAP1 JASPAR yes 70339782
chr6 27655310 27655319 THAP1 JASPAR yes 100944699
chr6 27655313 27655317 LFA1 TRANSFAC yes 70339783
chr6 27655313 27655317 LFA1 TRANSFAC yes 100944700
chr6 27655333 27655337 NFE TRANSFAC yes 70339784
chr6 27655333 27655337 NFE TRANSFAC yes 100944701
chr6 27655336 27655342 MZF1 JASPAR yes 70339785
chr6 27655336 27655342 MZF1 JASPAR yes 100944702
chr6 27655340 27655345 MYC TRANSFAC yes 70339786
chr6 27655340 27655345 MYC TRANSFAC yes 100944703
chr6 27655390 27655394 NFE TRANSFAC yes 70339787
chr6 27655390 27655394 NFE TRANSFAC yes 100944704
chr6 27655435 27655447 TFAP2B JASPAR yes 70339788
chr6 27655435 27655447 TFAP2C JASPAR yes 70339789
chr6 27655435 27655447 TFAP2B JASPAR yes 100944705
chr6 27655435 27655447 TFAP2C JASPAR yes 100944706
chr6 27655436 27655445 TFAP2A JASPAR yes 70339790
chr6 27655436 27655445 TFAP2A JASPAR yes 100944707
chr6 27655454 27655459 ETS2 TRANSFAC yes 70339791
chr6 27655454 27655459 ETS2 TRANSFAC yes 100944708
chr6 27655466 27655473 JUN TRANSFAC yes 70339792
chr6 27655466 27655473 SP1 TRANSFAC yes 70339793
chr6 27655466 27655473 JUN TRANSFAC yes 100944709
chr6 27655466 27655473 SP1 TRANSFAC yes 100944710
chr6 27655475 27655492 ESR1 JASPAR yes 70339794
chr6 27655475 27655492 ESR1 JASPAR yes 100944711
SNP sites on vista51448[chr6:27655152-27655475]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27655173 rs115692980 A T no 8933174
chr6 27655219 rs528342580 T A
CTCF E2F8
8933175
chr6 27655306 rs116108074 G A
CTCF RAD21 REST RUNX3 SMC3 ZNF263
8933176
chr6 27655307 rs142762838 G A
CTCF RAD21 REST RUNX3 SMC3 ZNF263
8933177
chr6 27655411 rs190756334 C T
CTCF RAD21 RUNX3 SMC3
8933178
chr6 27655441 rs73742455 G A
CTCF RAD21 RUNX3 SMC3 TFAP2A TFAP2B TFAP2C
8933179
Genes possibly regulated by vista51448[chr6:27655152-27655475]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista51448[chr6:27655152-27655475]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results