EnhancerDB
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  3. vista51452[chr6:27720726-27720895]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51452[chr6:27720726-27720895]
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Tissue distribution of vista51452
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Transcription factor that possibly regulate vista51452[chr6:27720726-27720895]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27720665 27721252 RELA UCSC Txn Factor no Conserved 108539333
chr6 27720715 27721225 E2F6 UCSC Txn Factor no Conserved 108539334
chr6 27720749 27721094 PHF8 UCSC Txn Factor no Conserved 108539335
chr6 27720840 27721276 MAX UCSC Txn Factor no Conserved 108539336
chr6 27720708 27720726 IRF2 JASPAR yes 70339907
chr6 27720708 27720726 IRF2 JASPAR yes 100946949
chr6 27720725 27720740 FOXP1 JASPAR yes 70339908
chr6 27720725 27720740 FOXP1 JASPAR yes 100946951
chr6 27720726 27720741 FOXP1 JASPAR yes 70339909
chr6 27720726 27720741 FOXP1 JASPAR yes 100946952
chr6 27720727 27720742 FOXP1 JASPAR yes 70339910
chr6 27720727 27720742 FOXP1 JASPAR yes 100946953
chr6 27720727 27720748 IRF1 JASPAR yes 70339911
chr6 27720727 27720748 IRF1 JASPAR yes 100946954
chr6 27720728 27720743 FOXP1 JASPAR yes 70339912
chr6 27720728 27720743 FOXP1 JASPAR yes 100946955
chr6 27720728 27720749 IRF1 JASPAR yes 70339913
chr6 27720728 27720749 IRF1 JASPAR yes 100946956
chr6 27720729 27720744 FOXP1 JASPAR yes 70339914
chr6 27720729 27720744 FOXP1 JASPAR yes 100946957
chr6 27720729 27720750 IRF1 JASPAR yes 70339915
chr6 27720729 27720750 IRF1 JASPAR yes 100946958
chr6 27720730 27720745 FOXP1 JASPAR yes 70339916
chr6 27720730 27720745 FOXP1 JASPAR yes 100946959
chr6 27720730 27720751 IRF1 JASPAR yes 70339917
chr6 27720730 27720751 IRF1 JASPAR yes 100946960
chr6 27720731 27720746 FOXP1 JASPAR yes 70339918
chr6 27720731 27720746 FOXP1 JASPAR yes 100946961
chr6 27720732 27720747 FOXP1 JASPAR yes 70339919
chr6 27720732 27720747 FOXP1 JASPAR yes 100946962
chr6 27720733 27720748 FOXP1 JASPAR yes 70339920
chr6 27720733 27720748 FOXP1 JASPAR yes 100946963
chr6 27720733 27720754 IRF1 JASPAR yes 70339921
chr6 27720733 27720754 IRF1 JASPAR yes 100946964
chr6 27720734 27720749 FOXP1 JASPAR yes 70339922
chr6 27720734 27720749 FOXP1 JASPAR yes 100946965
chr6 27720737 27720752 PRDM1 JASPAR yes 70339923
chr6 27720737 27720752 STAT2 JASPAR yes 70339924
chr6 27720737 27720752 PRDM1 JASPAR yes 100946966
chr6 27720737 27720752 STAT2 JASPAR yes 100946967
chr6 27720752 27720759 SPIB JASPAR yes 70339925
chr6 27720752 27720759 SPIB JASPAR yes 100946968
chr6 27720786 27720790 H1TF2 TRANSFAC yes 70339926
chr6 27720786 27720790 NFE TRANSFAC yes 70339927
chr6 27720786 27720790 SRF TRANSFAC yes 70339928
chr6 27720786 27720790 H1TF2 TRANSFAC yes 100946969
chr6 27720786 27720790 NFE TRANSFAC yes 100946970
chr6 27720786 27720790 SRF TRANSFAC yes 100946971
chr6 27720791 27720804 TFAP2A JASPAR yes 70339929
chr6 27720791 27720804 TFAP2B JASPAR yes 70339930
chr6 27720791 27720804 TFAP2C JASPAR yes 70339931
chr6 27720791 27720804 TFAP2A JASPAR yes 100946972
chr6 27720791 27720804 TFAP2B JASPAR yes 100946973
chr6 27720791 27720804 TFAP2C JASPAR yes 100946974
chr6 27720819 27720824 ETS2 TRANSFAC yes 70339932
chr6 27720819 27720824 ETS2 TRANSFAC yes 100946975
chr6 27720824 27720835 NFKB1 JASPAR yes 70339933
chr6 27720824 27720835 NFKB1 JASPAR yes 100946976
chr6 27720825 27720835 NFKB1 JASPAR yes 70339934
chr6 27720825 27720835 NFKB1 JASPAR yes 100946977
chr6 27720828 27720842 EBF1 JASPAR yes 70339935
chr6 27720828 27720842 EBF1 JASPAR yes 100946978
chr6 27720836 27720847 NFKB1 JASPAR yes 70339936
chr6 27720836 27720847 NFKB1 JASPAR yes 100946979
chr6 27720837 27720847 NFKB1 JASPAR yes 70339937
chr6 27720837 27720847 RELA JASPAR yes 70339938
chr6 27720837 27720847 REL JASPAR yes 70339939
chr6 27720837 27720847 NFKB1 JASPAR yes 100946980
chr6 27720837 27720847 RELA JASPAR yes 100946981
chr6 27720837 27720847 REL JASPAR yes 100946982
chr6 27720842 27720852 ZNF740 JASPAR yes 70339940
chr6 27720842 27720852 ZNF740 JASPAR yes 100946983
chr6 27720843 27720849 SP1 TRANSFAC yes 70339941
chr6 27720843 27720849 SP1 TRANSFAC yes 100946984
chr6 27720856 27720869 ELF3 JASPAR yes 70339942
chr6 27720856 27720869 ELF3 JASPAR yes 100946985
chr6 27720876 27720893 BCL6B JASPAR yes 70339943
chr6 27720876 27720893 BCL6B JASPAR yes 100946986
chr6 27720877 27720892 STAT1 JASPAR yes 70339944
chr6 27720877 27720892 STAT1 JASPAR yes 100946987
chr6 27720879 27720890 STAT1 JASPAR yes 70339945
chr6 27720879 27720890 STAT3 JASPAR yes 70339946
chr6 27720879 27720890 STAT1 JASPAR yes 100946988
chr6 27720879 27720890 STAT3 JASPAR yes 100946989
chr6 27720888 27720903 ESR2 JASPAR yes 70339947
chr6 27720888 27720903 ESR2 JASPAR yes 100946990
chr6 27720892 27720896 NFE TRANSFAC yes 70339948
chr6 27720892 27720896 NFE TRANSFAC yes 100946991
chr6 27720895 27720904 ZEB1 JASPAR yes 70339949
chr6 27720895 27720904 ZEB1 JASPAR yes 100946992
SNP sites on vista51452[chr6:27720726-27720895]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27720728 rs35451386 CA C
E2F6 FOXP1 IRF1 RELA
8933443
chr6 27720728 rs398001073 CA C
E2F6 FOXP1 IRF1 RELA
8933444
Genes possibly regulated by vista51452[chr6:27720726-27720895]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27775257 27775709 - HIST1H2BL ENSG00000185130.4 27775709 0.92 0.91 6271 45186
chr6 27775899 27776429 + HIST1H2AI ENSG00000196747.3 27775899 0.88 0.89 6272 44996
chr6 27777842 27778314 + HIST1H3H ENSG00000203813.4 27777842 0.84 0.89 6273 43053
chr6 27782112 27782607 - HIST1H2AJ ENSG00000182611.3 27782607 0.89 0.95 6274 38288
chr6 27782822 27783267 + HIST1H2BM ENSG00000196374.5 27782822 0.89 0.95 6275 38073
chr6 27791884 27792257 + HIST1H4J ENSG00000197238.3 27791884 0.85 0.82 6276 29011
chr6 27798952 27799305 - HIST1H4K ENSG00000197914.2 27799305 0.86 0.91 6277 21590
chr6 27805658 27806117 - HIST1H2AK ENSG00000184348.2 27806117 0.94 0.91 6278 14778
chr6 27806323 27823487 + HIST1H2BN ENSG00000233822.3 27806323 0.89 0.84 6279 14572
Expression level of Genes
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miRNAs possibly regulated by vista51452[chr6:27720726-27720895]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results