EnhancerDB
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  3. vista51453[chr6:27740489-27740807]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51453[chr6:27740489-27740807]
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Tissue distribution of vista51453
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Transcription factor that possibly regulate vista51453[chr6:27740489-27740807]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27739797 27740661 E2F1 UCSC Txn Factor no Conserved 108539337
chr6 27740152 27740793 ZNF263 UCSC Txn Factor no Conserved 108539338
chr6 27740196 27740586 CTCF UCSC Txn Factor no Conserved 108539339
chr6 27740212 27740658 MAX UCSC Txn Factor no Conserved 108539340
chr6 27740244 27740534 SMC3 UCSC Txn Factor no Conserved 108539341
chr6 27740252 27740536 RAD21 UCSC Txn Factor no Conserved 108539342
chr6 27740269 27740596 MAFK UCSC Txn Factor no Conserved 108539343
chr6 27740328 27740608 MAFF UCSC Txn Factor no Conserved 108539344
chr6 27740508 27740514 ETS1 JASPAR yes 70339950
chr6 27740508 27740514 ETS1 JASPAR yes 100949086
chr6 27740508 27740522 STAT1 JASPAR yes 70339951
chr6 27740508 27740522 STAT1 JASPAR yes 100949087
chr6 27740513 27740525 NHLH1 JASPAR yes 70339952
chr6 27740513 27740525 NHLH1 JASPAR yes 100949088
chr6 27740521 27740537 RFX4 JASPAR yes 70339953
chr6 27740521 27740537 RFX4 JASPAR yes 100949089
chr6 27740540 27740555 RUNX2 JASPAR yes 70339954
chr6 27740540 27740555 RUNX2 JASPAR yes 100949090
chr6 27740542 27740546 YY1 TRANSFAC yes 70339955
chr6 27740542 27740546 YY1 TRANSFAC yes 100949091
chr6 27740549 27740554 SP1 TRANSFAC yes 70339956
chr6 27740549 27740554 SP1 TRANSFAC yes 100949092
chr6 27740552 27740556 LFA1 TRANSFAC yes 70339957
chr6 27740552 27740556 LFA1 TRANSFAC yes 100949093
chr6 27740576 27740583 SPIB JASPAR yes 70339958
chr6 27740576 27740583 SPIB JASPAR yes 100949094
chr6 27740592 27740603 TBX20 JASPAR yes 70339959
chr6 27740592 27740603 TBX2 JASPAR yes 70339960
chr6 27740592 27740603 TBX20 JASPAR yes 100949095
chr6 27740592 27740603 TBX2 JASPAR yes 100949096
chr6 27740593 27740601 TBX5 JASPAR yes 70339961
chr6 27740593 27740601 TBX5 JASPAR yes 100949097
chr6 27740611 27740621 EMX1 JASPAR yes 70339962
chr6 27740611 27740621 EMX2 JASPAR yes 70339963
chr6 27740611 27740621 EN2 JASPAR yes 70339964
chr6 27740611 27740621 ESX1 JASPAR yes 70339965
chr6 27740611 27740621 EVX1 JASPAR yes 70339966
chr6 27740611 27740621 EVX2 JASPAR yes 70339967
chr6 27740611 27740621 GBX1 JASPAR yes 70339968
chr6 27740611 27740621 GBX2 JASPAR yes 70339969
chr6 27740611 27740621 HESX1 JASPAR yes 70339970
chr6 27740611 27740621 HOXA2 JASPAR yes 70339971
chr6 27740611 27740621 HOXB2 JASPAR yes 70339972
chr6 27740611 27740621 HOXB3 JASPAR yes 70339973
chr6 27740611 27740621 LBX2 JASPAR yes 70339974
chr6 27740611 27740621 LHX2 JASPAR yes 70339975
chr6 27740611 27740621 LHX6 JASPAR yes 70339976
chr6 27740611 27740621 MEOX1 JASPAR yes 70339977
chr6 27740611 27740621 MEOX2 JASPAR yes 70339978
chr6 27740611 27740621 MIXL1 JASPAR yes 70339979
chr6 27740611 27740621 NOTO JASPAR yes 70339980
chr6 27740611 27740621 RAX JASPAR yes 70339981
chr6 27740611 27740621 EMX1 JASPAR yes 100949098
chr6 27740611 27740621 EMX2 JASPAR yes 100949099
chr6 27740611 27740621 EN2 JASPAR yes 100949100
chr6 27740611 27740621 ESX1 JASPAR yes 100949101
chr6 27740611 27740621 EVX1 JASPAR yes 100949102
chr6 27740611 27740621 EVX2 JASPAR yes 100949103
chr6 27740611 27740621 GBX1 JASPAR yes 100949104
chr6 27740611 27740621 GBX2 JASPAR yes 100949105
chr6 27740611 27740621 HESX1 JASPAR yes 100949106
chr6 27740611 27740621 HOXA2 JASPAR yes 100949107
chr6 27740611 27740621 HOXB2 JASPAR yes 100949108
chr6 27740611 27740621 HOXB3 JASPAR yes 100949109
chr6 27740611 27740621 LBX2 JASPAR yes 100949110
chr6 27740611 27740621 LHX2 JASPAR yes 100949111
chr6 27740611 27740621 LHX6 JASPAR yes 100949112
chr6 27740611 27740621 MEOX1 JASPAR yes 100949113
chr6 27740611 27740621 MEOX2 JASPAR yes 100949114
chr6 27740611 27740621 MIXL1 JASPAR yes 100949115
chr6 27740611 27740621 NOTO JASPAR yes 100949116
chr6 27740611 27740621 RAX JASPAR yes 100949117
chr6 27740612 27740620 DLX6 JASPAR yes 70339982
chr6 27740612 27740620 EN1 JASPAR yes 70339983
chr6 27740612 27740620 LBX1 JASPAR yes 70339984
chr6 27740612 27740620 PAX4 JASPAR yes 70339985
chr6 27740612 27740620 PDX1 JASPAR yes 70339986
chr6 27740612 27740620 VAX1 JASPAR yes 70339987
chr6 27740612 27740620 VAX2 JASPAR yes 70339988
chr6 27740612 27740620 VSX1 JASPAR yes 70339989
chr6 27740612 27740620 VSX2 JASPAR yes 70339990
chr6 27740612 27740620 DLX6 JASPAR yes 100949118
chr6 27740612 27740620 EN1 JASPAR yes 100949119
chr6 27740612 27740620 LBX1 JASPAR yes 100949120
chr6 27740612 27740620 PAX4 JASPAR yes 100949121
chr6 27740612 27740620 PDX1 JASPAR yes 100949122
chr6 27740612 27740620 VAX1 JASPAR yes 100949123
chr6 27740612 27740620 VAX2 JASPAR yes 100949124
chr6 27740612 27740620 VSX1 JASPAR yes 100949125
chr6 27740612 27740620 VSX2 JASPAR yes 100949126
chr6 27740612 27740622 POU6F2 JASPAR yes 70339991
chr6 27740612 27740622 POU6F2 JASPAR yes 100949127
chr6 27740612 27740626 POU1F1 JASPAR yes 70339992
chr6 27740612 27740626 POU1F1 JASPAR yes 100949128
chr6 27740613 27740625 POU3F1 JASPAR yes 70339993
chr6 27740613 27740625 POU3F2 JASPAR yes 70339994
chr6 27740613 27740625 POU3F1 JASPAR yes 100949129
chr6 27740613 27740625 POU3F2 JASPAR yes 100949130
chr6 27740613 27740626 POU3F3 JASPAR yes 70339995
chr6 27740613 27740626 POU3F3 JASPAR yes 100949131
chr6 27740614 27740626 POU2F1 JASPAR yes 70339996
chr6 27740614 27740626 POU2F1 JASPAR yes 100949132
chr6 27740615 27740624 POU3F4 JASPAR yes 70339997
chr6 27740615 27740624 POU5F1B JASPAR yes 70339998
chr6 27740615 27740624 POU3F4 JASPAR yes 100949133
chr6 27740615 27740624 POU5F1B JASPAR yes 100949134
chr6 27740621 27740631 MEF2A JASPAR yes 70339999
chr6 27740621 27740631 MEF2A JASPAR yes 100949135
chr6 27740622 27740626 TEAD2 TRANSFAC yes 70340000
chr6 27740622 27740626 TEAD2 TRANSFAC yes 100949136
chr6 27740622 27740632 ALX3 JASPAR yes 70340001
chr6 27740622 27740632 GSX1 JASPAR yes 70340002
chr6 27740622 27740632 MEOX1 JASPAR yes 70340003
chr6 27740622 27740632 ALX3 JASPAR yes 100949137
chr6 27740622 27740632 GSX1 JASPAR yes 100949138
chr6 27740622 27740632 MEOX1 JASPAR yes 100949139
chr6 27740622 27740636 RORA JASPAR yes 70340004
chr6 27740622 27740636 RORA JASPAR yes 100949140
chr6 27740623 27740631 LBX1 JASPAR yes 70340005
chr6 27740623 27740631 PDX1 JASPAR yes 70340006
chr6 27740623 27740631 VAX1 JASPAR yes 70340007
chr6 27740623 27740631 VAX2 JASPAR yes 70340008
chr6 27740623 27740631 VSX1 JASPAR yes 70340009
chr6 27740623 27740631 VSX2 JASPAR yes 70340010
chr6 27740623 27740631 LBX1 JASPAR yes 100949141
chr6 27740623 27740631 PDX1 JASPAR yes 100949142
chr6 27740623 27740631 VAX1 JASPAR yes 100949143
chr6 27740623 27740631 VAX2 JASPAR yes 100949144
chr6 27740623 27740631 VSX1 JASPAR yes 100949145
chr6 27740623 27740631 VSX2 JASPAR yes 100949146
chr6 27740623 27740633 POU6F2 JASPAR yes 70340011
chr6 27740623 27740633 POU6F2 JASPAR yes 100949147
chr6 27740624 27740635 PHOX2A JASPAR yes 70340012
chr6 27740624 27740635 PHOX2A JASPAR yes 100949148
chr6 27740639 27740653 RXRB JASPAR yes 70340013
chr6 27740639 27740653 RXRG JASPAR yes 70340014
chr6 27740639 27740653 RXRB JASPAR yes 100949149
chr6 27740639 27740653 RXRG JASPAR yes 100949150
chr6 27740641 27740645 LFA1 TRANSFAC yes 70340015
chr6 27740641 27740645 LFA1 TRANSFAC yes 100949151
chr6 27740646 27740652 ESR1 TRANSFAC yes 70340016
chr6 27740646 27740652 ESR1 TRANSFAC yes 100949152
chr6 27740648 27740652 ESR1 TRANSFAC yes 70340017
chr6 27740648 27740652 ESR1 TRANSFAC yes 100949153
chr6 27740703 27740714 FOXP2 JASPAR yes 70340018
chr6 27740703 27740714 FOXP2 JASPAR yes 100949154
chr6 27740705 27740715 HOXA13 JASPAR yes 70340019
chr6 27740705 27740715 HOXB13 JASPAR yes 70340020
chr6 27740705 27740715 HOXD13 JASPAR yes 70340021
chr6 27740705 27740715 HOXA13 JASPAR yes 100949155
chr6 27740705 27740715 HOXB13 JASPAR yes 100949156
chr6 27740705 27740715 HOXD13 JASPAR yes 100949157
chr6 27740705 27740716 FOXH1 JASPAR yes 70340022
chr6 27740705 27740716 FOXH1 JASPAR yes 100949158
chr6 27740713 27740727 GATA2 JASPAR yes 70340023
chr6 27740713 27740727 GATA2 JASPAR yes 100949159
chr6 27740717 27740725 GATA5 JASPAR yes 70340024
chr6 27740717 27740725 GATA5 JASPAR yes 100949160
chr6 27740732 27740745 ELF1 JASPAR yes 70340025
chr6 27740732 27740745 ELF1 JASPAR yes 100949161
chr6 27740735 27740740 ETS2 TRANSFAC yes 70340026
chr6 27740735 27740740 ETS2 TRANSFAC yes 100949162
chr6 27740748 27740763 MEF2A JASPAR yes 70340027
chr6 27740748 27740763 MEF2A JASPAR yes 100949163
chr6 27740749 27740764 MEF2C JASPAR yes 70340028
chr6 27740749 27740764 MEF2C JASPAR yes 100949164
chr6 27740750 27740762 MEF2A JASPAR yes 70340029
chr6 27740750 27740762 MEF2B JASPAR yes 70340030
chr6 27740750 27740762 MEF2D JASPAR yes 70340031
chr6 27740750 27740762 MEF2A JASPAR yes 100949165
chr6 27740750 27740762 MEF2B JASPAR yes 100949166
chr6 27740750 27740762 MEF2D JASPAR yes 100949167
chr6 27740751 27740761 MEF2A JASPAR yes 70340032
chr6 27740751 27740761 MEF2A JASPAR yes 100949168
chr6 27740758 27740761 MYB TRANSFAC yes 70340033
chr6 27740758 27740761 MYB TRANSFAC yes 100949169
SNP sites on vista51453[chr6:27740489-27740807]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27740593 rs183945221 A G
E2F1 MAFF MAFK MAX TBX2 TBX20 TBX5 ZNF263
8933614
chr6 27740646 rs9380018 A G
E2F1 ESR1 MAX RXRB RXRG ZNF263
8933615
chr6 27740666 rs9468223 C T
ZNF263
8933616
chr6 27740735 rs141635254 C T
ELF1 ETS2 ZNF263
8933617
Genes possibly regulated by vista51453[chr6:27740489-27740807]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27775257 27775709 - HIST1H2BL ENSG00000185130.4 27775709 0.92 0.91 6271 65098
chr6 27775899 27776429 + HIST1H2AI ENSG00000196747.3 27775899 0.88 0.89 6272 64908
chr6 27777842 27778314 + HIST1H3H ENSG00000203813.4 27777842 0.84 0.89 6273 62965
chr6 27782112 27782607 - HIST1H2AJ ENSG00000182611.3 27782607 0.89 0.95 6274 58200
chr6 27782822 27783267 + HIST1H2BM ENSG00000196374.5 27782822 0.89 0.95 6275 57985
chr6 27791884 27792257 + HIST1H4J ENSG00000197238.3 27791884 0.85 0.82 6276 48923
chr6 27798952 27799305 - HIST1H4K ENSG00000197914.2 27799305 0.86 0.91 6277 41502
chr6 27805658 27806117 - HIST1H2AK ENSG00000184348.2 27806117 0.94 0.91 6278 34690
chr6 27806323 27823487 + HIST1H2BN ENSG00000233822.3 27806323 0.89 0.84 6279 34484
chr6 27833034 27833606 + HIST1H2AL ENSG00000198374.3 27833034 0.92 0.97 6280 7773
chr6 27834570 27835359 - HIST1H1B ENSG00000184357.3 27835359 0.87 0.97 6281 5448
chr6 27839623 27840099 - HIST1H3I ENSG00000182572.2 27840099 0.9 0.97 6282 708
Expression level of Genes
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miRNAs possibly regulated by vista51453[chr6:27740489-27740807]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results