EnhancerDB
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  3. vista51455[chr6:27745629-27745723]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51455[chr6:27745629-27745723]
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Tissue distribution of vista51455
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Transcription factor that possibly regulate vista51455[chr6:27745629-27745723]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27745390 27745926 YY1 UCSC Txn Factor no Conserved 108539345
chr6 27745432 27745830 TBP UCSC Txn Factor no Conserved 108539346
chr6 27745456 27745897 RPC155 UCSC Txn Factor no Conserved 108539347
chr6 27745495 27745836 ATF3 UCSC Txn Factor no Conserved 108539348
chr6 27745503 27745773 BDP1 UCSC Txn Factor no Conserved 108539349
chr6 27745652 27745660 FOXO3 JASPAR yes 70340090
chr6 27745653 27745663 NFATC3 JASPAR yes 70340091
chr6 27745655 27745661 ETS1 JASPAR yes 70340092
chr6 27745676 27745686 ELK1 JASPAR yes 70340093
chr6 27745676 27745686 ETS1 JASPAR yes 70340094
chr6 27745676 27745686 ETV1 JASPAR yes 70340095
chr6 27745676 27745686 ETV5 JASPAR yes 70340096
chr6 27745676 27745686 ETV6 JASPAR yes 70340097
chr6 27745676 27745686 FLI1 JASPAR yes 70340098
chr6 27745676 27745686 GABPA JASPAR yes 70340099
chr6 27745676 27745687 ELK4 JASPAR yes 70340100
chr6 27745678 27745684 ETS1 JASPAR yes 70340101
chr6 27745678 27745684 SPI1 JASPAR yes 70340102
chr6 27745697 27745700 MYB TRANSFAC yes 70340103
SNP sites on vista51455[chr6:27745629-27745723]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27745631 rs142675618 A AT
ATF3 BDP1 RPC155 TBP YY1
8933660
chr6 27745652 rs143879210 G A
ATF3 BDP1 FOXO3 RPC155 TBP YY1
8933661
chr6 27745685 rs192640550 C T
ATF3 BDP1 ELK1 ELK4 ETS1 ETV1 ETV5 ETV6 FLI1 GABPA RPC155 TBP YY1
8933662
chr6 27745714 rs6920477 G A
ATF3 BDP1 RPC155 TBP YY1
8933663
chr6 27745715 rs188010313 G A
ATF3 BDP1 RPC155 TBP YY1
8933664
chr6 27745718 rs537629280 C G,T
ATF3 BDP1 RPC155 TBP YY1
8933665
chr6 27745718 rs58546219 C CG
ATF3 BDP1 RPC155 TBP YY1
8933666
chr6 27745719 rs9468225 T A,G
ATF3 BDP1 RPC155 TBP YY1
8933667
Genes possibly regulated by vista51455[chr6:27745629-27745723]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27775257 27775709 - HIST1H2BL ENSG00000185130.4 27775709 0.92 0.91 6271 70014
chr6 27775899 27776429 + HIST1H2AI ENSG00000196747.3 27775899 0.88 0.89 6272 69824
chr6 27777842 27778314 + HIST1H3H ENSG00000203813.4 27777842 0.84 0.89 6273 67881
chr6 27782112 27782607 - HIST1H2AJ ENSG00000182611.3 27782607 0.89 0.95 6274 63116
chr6 27782822 27783267 + HIST1H2BM ENSG00000196374.5 27782822 0.89 0.95 6275 62901
chr6 27791884 27792257 + HIST1H4J ENSG00000197238.3 27791884 0.85 0.82 6276 53839
chr6 27798952 27799305 - HIST1H4K ENSG00000197914.2 27799305 0.86 0.91 6277 46418
chr6 27805658 27806117 - HIST1H2AK ENSG00000184348.2 27806117 0.94 0.91 6278 39606
chr6 27806323 27823487 + HIST1H2BN ENSG00000233822.3 27806323 0.89 0.84 6279 39400
chr6 27833034 27833606 + HIST1H2AL ENSG00000198374.3 27833034 0.92 0.97 6280 12689
chr6 27834570 27835359 - HIST1H1B ENSG00000184357.3 27835359 0.87 0.97 6281 10364
chr6 27839623 27840099 - HIST1H3I ENSG00000182572.2 27840099 0.9 0.97 6282 5624
chr6 27840926 27841289 - HIST1H4L ENSG00000198558.2 27841289 0.95 1.0 6283 4434
Expression level of Genes
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miRNAs possibly regulated by vista51455[chr6:27745629-27745723]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results