EnhancerDB
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  3. vista51457[chr6:27780866-27781094]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51457[chr6:27780866-27781094]
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Tissue distribution of vista51457
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Transcription factor that possibly regulate vista51457[chr6:27780866-27781094]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 27774286 27784237 POLR2A UCSC Txn Factor no Conserved 108539355
chr6 27780888 27780892 NFE TRANSFAC yes 70340138
chr6 27780900 27780919 PAX5 JASPAR yes 70340139
chr6 27780904 27780915 NFE2L2 JASPAR yes 70340140
chr6 27780907 27780913 SOX10 JASPAR yes 70340141
chr6 27780920 27780924 NFE TRANSFAC yes 70340142
chr6 27780924 27780939 FOXP1 JASPAR yes 70340143
chr6 27780925 27780940 FOXP1 JASPAR yes 70340144
chr6 27780926 27780941 FOXP1 JASPAR yes 70340145
chr6 27780926 27780947 IRF1 JASPAR yes 70340146
chr6 27780927 27780942 FOXP1 JASPAR yes 70340147
chr6 27780927 27780948 IRF1 JASPAR yes 70340148
chr6 27780928 27780943 FOXP1 JASPAR yes 70340149
chr6 27780928 27780949 IRF1 JASPAR yes 70340150
chr6 27780929 27780944 FOXP1 JASPAR yes 70340151
chr6 27780929 27780950 IRF1 JASPAR yes 70340152
chr6 27780930 27780945 FOXP1 JASPAR yes 70340153
chr6 27780930 27780951 IRF1 JASPAR yes 70340154
chr6 27780931 27780946 FOXP1 JASPAR yes 70340155
chr6 27780931 27780952 IRF1 JASPAR yes 70340156
chr6 27780932 27780947 FOXP1 JASPAR yes 70340157
chr6 27780932 27780953 IRF1 JASPAR yes 70340158
chr6 27780933 27780948 FOXP1 JASPAR yes 70340159
chr6 27780933 27780954 IRF1 JASPAR yes 70340160
chr6 27780934 27780949 FOXP1 JASPAR yes 70340161
chr6 27780934 27780955 IRF1 JASPAR yes 70340162
chr6 27780935 27780950 FOXP1 JASPAR yes 70340163
chr6 27780935 27780956 IRF1 JASPAR yes 70340164
chr6 27780936 27780951 FOXP1 JASPAR yes 70340165
chr6 27780936 27780957 IRF1 JASPAR yes 70340166
chr6 27780937 27780952 FOXP1 JASPAR yes 70340167
chr6 27780937 27780958 IRF1 JASPAR yes 70340168
chr6 27780938 27780953 FOXP1 JASPAR yes 70340169
chr6 27780940 27780955 FOXP1 JASPAR yes 70340170
chr6 27780951 27780958 GATA3 TRANSFAC yes 70340171
chr6 27780951 27780959 GATA5 JASPAR yes 70340172
chr6 27780954 27780957 MYB TRANSFAC yes 70340173
chr6 27780955 27780969 SPI1 JASPAR yes 70340174
chr6 27780965 27780980 JUND JASPAR yes 70340175
chr6 27780966 27780979 JUN JASPAR yes 70340176
chr6 27780967 27780975 CREB1 JASPAR yes 70340177
chr6 27780977 27780992 MEF2C JASPAR yes 70340178
chr6 27780978 27780993 MEF2A JASPAR yes 70340179
chr6 27780979 27780991 MEF2A JASPAR yes 70340180
chr6 27780979 27780991 MEF2D JASPAR yes 70340181
chr6 27780985 27781003 IRF2 JASPAR yes 70340182
chr6 27780986 27781001 HNF4A JASPAR yes 70340183
chr6 27780987 27781001 NR2F1 JASPAR yes 70340184
chr6 27780987 27781002 HNF4G JASPAR yes 70340185
chr6 27780990 27781002 IRF1 JASPAR yes 70340186
chr6 27780997 27781012 STAT1 JASPAR yes 70340187
chr6 27780999 27781010 STAT1 JASPAR yes 70340188
chr6 27780999 27781010 STAT3 JASPAR yes 70340189
chr6 27781013 27781017 YY1 TRANSFAC yes 70340190
chr6 27781055 27781065 CUX2 JASPAR yes 70340191
chr6 27781062 27781069 NKX3-1 JASPAR yes 70340192
SNP sites on vista51457[chr6:27780866-27781094]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 27780978 rs58677321 A C
JUN JUND MEF2A MEF2C POLR2A
8933926
chr6 27781090 rs190438084 G A
POLR2A
8933927
Genes possibly regulated by vista51457[chr6:27780866-27781094]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 27775257 27775709 - HIST1H2BL ENSG00000185130.4 27775709 0.92 0.91 6271 94843
chr6 27775899 27776429 + HIST1H2AI ENSG00000196747.3 27775899 0.88 0.89 6272 95033
chr6 27777842 27778314 + HIST1H3H ENSG00000203813.4 27777842 0.84 0.89 6273 96976
chr6 27782112 27782607 - HIST1H2AJ ENSG00000182611.3 27782607 0.89 0.95 6274 98487
chr6 27782822 27783267 + HIST1H2BM ENSG00000196374.5 27782822 0.89 0.95 6275 98272
chr6 27791884 27792257 + HIST1H4J ENSG00000197238.3 27791884 0.85 0.82 6276 89210
chr6 27798952 27799305 - HIST1H4K ENSG00000197914.2 27799305 0.86 0.91 6277 81789
chr6 27805658 27806117 - HIST1H2AK ENSG00000184348.2 27806117 0.94 0.91 6278 74977
chr6 27806323 27823487 + HIST1H2BN ENSG00000233822.3 27806323 0.89 0.84 6279 74771
chr6 27833034 27833606 + HIST1H2AL ENSG00000198374.3 27833034 0.92 0.97 6280 48060
chr6 27834570 27835359 - HIST1H1B ENSG00000184357.3 27835359 0.87 0.97 6281 45735
chr6 27839623 27840099 - HIST1H3I ENSG00000182572.2 27840099 0.9 0.97 6282 40995
chr6 27840926 27841289 - HIST1H4L ENSG00000198558.2 27841289 0.95 1.0 6283 39805
chr6 27858093 27860884 - HIST1H3J ENSG00000197153.3 27860884 0.89 0.95 6284 20210
chr6 27860477 27860963 - HIST1H2AM ENSG00000233224.1 27860963 0.9 0.94 6285 20131
chr6 27861203 27861669 + HIST1H2BO ENSG00000196331.5 27861203 0.92 0.82 6286 19891
chr6 27878963 27880174 - OR2B2 ENSG00000168131.2 27880174 0.96 1.0 6287 920
Expression level of Genes
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miRNAs possibly regulated by vista51457[chr6:27780866-27781094]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results