EnhancerDB
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  3. vista51463[chr6:28072476-28072872]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51463[chr6:28072476-28072872]
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Tissue distribution of vista51463
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Transcription factor that possibly regulate vista51463[chr6:28072476-28072872]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28072056 28073201 POLR2A UCSC Txn Factor no Conserved 108539370
chr6 28072203 28072979 PHF8 UCSC Txn Factor no Conserved 108539371
chr6 28072302 28072939 CTCF UCSC Txn Factor no Conserved 108539372
chr6 28072323 28072958 MAX UCSC Txn Factor no Conserved 108539373
chr6 28072344 28072842 TAF1 UCSC Txn Factor no Conserved 108539374
chr6 28072349 28073002 GABPA UCSC Txn Factor no Conserved 108539375
chr6 28072385 28072769 ELF1 UCSC Txn Factor no Conserved 108539376
chr6 28072467 28072481 PLAG1 JASPAR yes 70340389
chr6 28072467 28072481 PLAG1 JASPAR yes 100958070
chr6 28072476 28072481 TFAP2A TRANSFAC yes 70340390
chr6 28072476 28072481 TFAP2A TRANSFAC yes 100958071
chr6 28072476 28072482 MZF1 JASPAR yes 70340391
chr6 28072476 28072482 MZF1 JASPAR yes 100958072
chr6 28072479 28072495 GLIS1 JASPAR yes 70340392
chr6 28072479 28072495 GLIS1 JASPAR yes 100958073
chr6 28072480 28072494 GLIS2 JASPAR yes 70340393
chr6 28072480 28072494 GLIS3 JASPAR yes 70340394
chr6 28072480 28072494 GLIS2 JASPAR yes 100958074
chr6 28072480 28072494 GLIS3 JASPAR yes 100958075
chr6 28072529 28072539 ELK1 JASPAR yes 70340395
chr6 28072529 28072539 ELK1 JASPAR yes 100958076
chr6 28072531 28072541 ELK1 JASPAR yes 70340396
chr6 28072531 28072541 GABPA JASPAR yes 70340397
chr6 28072531 28072541 ELK1 JASPAR yes 100958077
chr6 28072531 28072541 GABPA JASPAR yes 100958078
chr6 28072531 28072542 ELK4 JASPAR yes 70340398
chr6 28072531 28072542 FLI1 JASPAR yes 70340399
chr6 28072531 28072542 ELK4 JASPAR yes 100958079
chr6 28072531 28072542 FLI1 JASPAR yes 100958080
chr6 28072533 28072539 ETS1 JASPAR yes 70340400
chr6 28072533 28072539 SPI1 JASPAR yes 70340401
chr6 28072533 28072539 ETS1 JASPAR yes 100958081
chr6 28072533 28072539 SPI1 JASPAR yes 100958082
chr6 28072551 28072562 ELK4 JASPAR yes 70340402
chr6 28072551 28072562 FLI1 JASPAR yes 70340403
chr6 28072551 28072562 ELK4 JASPAR yes 100958083
chr6 28072551 28072562 FLI1 JASPAR yes 100958084
chr6 28072551 28072564 ELF3 JASPAR yes 70340404
chr6 28072551 28072564 ELF3 JASPAR yes 100958085
chr6 28072552 28072562 ELK1 JASPAR yes 70340405
chr6 28072552 28072562 ELK3 JASPAR yes 70340406
chr6 28072552 28072562 ETV5 JASPAR yes 70340407
chr6 28072552 28072562 ETV6 JASPAR yes 70340408
chr6 28072552 28072562 GABPA JASPAR yes 70340409
chr6 28072552 28072562 ELK1 JASPAR yes 100958086
chr6 28072552 28072562 ELK3 JASPAR yes 100958087
chr6 28072552 28072562 ETV5 JASPAR yes 100958088
chr6 28072552 28072562 ETV6 JASPAR yes 100958089
chr6 28072552 28072562 GABPA JASPAR yes 100958090
chr6 28072552 28072563 ELF5 JASPAR yes 70340410
chr6 28072552 28072563 ELF5 JASPAR yes 100958091
chr6 28072552 28072564 EHF JASPAR yes 70340411
chr6 28072552 28072564 ELF4 JASPAR yes 70340412
chr6 28072552 28072564 EHF JASPAR yes 100958092
chr6 28072552 28072564 ELF4 JASPAR yes 100958093
chr6 28072552 28072565 ELF1 JASPAR yes 70340413
chr6 28072552 28072565 ELF1 JASPAR yes 100958094
chr6 28072554 28072560 ETS1 JASPAR yes 70340414
chr6 28072554 28072560 SPI1 JASPAR yes 70340415
chr6 28072554 28072560 ETS1 JASPAR yes 100958095
chr6 28072554 28072560 SPI1 JASPAR yes 100958096
chr6 28072584 28072604 TP63 JASPAR yes 70340416
chr6 28072584 28072604 TP63 JASPAR yes 100958097
chr6 28072613 28072623 SP1 JASPAR yes 70340417
chr6 28072613 28072623 SP1 JASPAR yes 100958098
chr6 28072633 28072646 ELF1 JASPAR yes 70340418
chr6 28072633 28072646 ELF1 JASPAR yes 100958099
chr6 28072636 28072646 GABPA JASPAR yes 70340419
chr6 28072636 28072646 GABPA JASPAR yes 100958100
chr6 28072636 28072647 FLI1 JASPAR yes 70340420
chr6 28072636 28072647 FLI1 JASPAR yes 100958101
chr6 28072658 28072663 SP1 TRANSFAC yes 70340421
chr6 28072658 28072663 SP1 TRANSFAC yes 100958102
chr6 28072679 28072689 ID4 JASPAR yes 70340422
chr6 28072679 28072689 TCF3 JASPAR yes 70340423
chr6 28072679 28072689 TCF4 JASPAR yes 70340424
chr6 28072679 28072689 ID4 JASPAR yes 100958103
chr6 28072679 28072689 TCF3 JASPAR yes 100958104
chr6 28072679 28072689 TCF4 JASPAR yes 100958105
chr6 28072681 28072690 ZEB1 JASPAR yes 70340425
chr6 28072681 28072690 ZEB1 JASPAR yes 100958106
chr6 28072683 28072693 GCM2 JASPAR yes 70340426
chr6 28072683 28072693 GCM2 JASPAR yes 100958107
chr6 28072685 28072694 THAP1 JASPAR yes 70340427
chr6 28072685 28072694 THAP1 JASPAR yes 100958108
chr6 28072687 28072698 E2F1 JASPAR yes 70340428
chr6 28072687 28072698 E2F1 JASPAR yes 100958109
chr6 28072688 28072693 SP1 TRANSFAC yes 70340429
chr6 28072688 28072693 SP1 TRANSFAC yes 100958110
chr6 28072688 28072699 E2F4 JASPAR yes 70340430
chr6 28072688 28072699 E2F6 JASPAR yes 70340431
chr6 28072688 28072699 E2F4 JASPAR yes 100958111
chr6 28072688 28072699 E2F6 JASPAR yes 100958112
chr6 28072689 28072694 SP1 TRANSFAC yes 70340432
chr6 28072689 28072694 SP1 TRANSFAC yes 100958113
chr6 28072693 28072704 NFKB1 JASPAR yes 70340433
chr6 28072693 28072704 NFKB1 JASPAR yes 100958114
chr6 28072698 28072714 SOX4 JASPAR yes 70340434
chr6 28072698 28072714 SOX4 JASPAR yes 100958115
chr6 28072751 28072755 LFA1 TRANSFAC yes 70340435
chr6 28072751 28072755 LFA1 TRANSFAC yes 100958116
chr6 28072760 28072765 SP1 TRANSFAC yes 70340436
chr6 28072760 28072765 SP1 TRANSFAC yes 100958117
chr6 28072761 28072779 ESR1 JASPAR yes 70340437
chr6 28072761 28072779 ESR1 JASPAR yes 100958118
chr6 28072779 28072794 ZIC3 JASPAR yes 70340438
chr6 28072779 28072794 ZIC4 JASPAR yes 70340439
chr6 28072779 28072794 ZIC3 JASPAR yes 100958119
chr6 28072779 28072794 ZIC4 JASPAR yes 100958120
chr6 28072780 28072794 ZIC1 JASPAR yes 70340440
chr6 28072780 28072794 ZIC1 JASPAR yes 100958121
chr6 28072795 28072813 NFYA JASPAR yes 70340441
chr6 28072795 28072813 NFYA JASPAR yes 100958122
chr6 28072815 28072829 GLIS2 JASPAR yes 70340442
chr6 28072815 28072829 GLIS2 JASPAR yes 100958123
chr6 28072828 28072838 HINFP JASPAR yes 70340443
chr6 28072828 28072838 HINFP JASPAR yes 100958124
chr6 28072837 28072843 MZF1 JASPAR yes 70340444
chr6 28072837 28072843 MZF1 JASPAR yes 100958125
SNP sites on vista51463[chr6:28072476-28072872]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28072536 rs77689085 G A
CTCF ELF1 ELK1 ELK4 ETS1 FLI1 GABPA MAX PHF8 POLR2A SPI1 TAF1
8934889
chr6 28072602 rs2281588 G A
CTCF ELF1 GABPA MAX PHF8 POLR2A TAF1 TP63
8934890
chr6 28072782 rs372413236 A G
CTCF GABPA MAX PHF8 POLR2A TAF1 ZIC1 ZIC3 ZIC4
8934891
Genes possibly regulated by vista51463[chr6:28072476-28072872]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28048753 28057341 + ZNF165 ENSG00000197279.3 28048753 0.79 1.0 6289 76277
chr6 28092338 28097860 + ZSCAN16 ENSG00000196812.4 28092338 0.69 0.99 6290 80534
chr6 28109688 28127250 + ZKSCAN8 ENSG00000198315.6 28109688 0.69 0.99 6291 63184
Expression level of Genes
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miRNAs possibly regulated by vista51463[chr6:28072476-28072872]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results