EnhancerDB
  1. Home
  2. Enhancers
  3. vista51464[chr6:28080593-28080792]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51464[chr6:28080593-28080792]
Back to top
Tissue distribution of vista51464
Back to top
Transcription factor that possibly regulate vista51464[chr6:28080593-28080792]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28080612 28080622 NKX2-3 JASPAR yes 70340445
chr6 28080630 28080646 RFX2 JASPAR yes 70340446
chr6 28080630 28080646 RFX3 JASPAR yes 70340447
chr6 28080630 28080646 RFX4 JASPAR yes 70340448
chr6 28080630 28080646 RFX5 JASPAR yes 70340449
chr6 28080631 28080650 RFX2 JASPAR yes 70340450
chr6 28080633 28080648 RFX5 JASPAR yes 70340451
chr6 28080702 28080714 YY1 JASPAR yes 70340452
chr6 28080711 28080732 IRF1 JASPAR yes 70340453
chr6 28080719 28080730 FLI1 JASPAR yes 70340454
chr6 28080723 28080728 ETS2 TRANSFAC yes 70340455
chr6 28080732 28080736 H4TF2 TRANSFAC yes 70340456
chr6 28080739 28080745 HiNF-A TRANSFAC yes 70340457
chr6 28080742 28080754 FOXC2 JASPAR yes 70340458
chr6 28080742 28080756 FOXF2 JASPAR yes 70340459
chr6 28080743 28080751 FOXG1 JASPAR yes 70340460
chr6 28080743 28080754 FOXC1 JASPAR yes 70340461
chr6 28080744 28080755 FOXA1 JASPAR yes 70340462
chr6 28080745 28080753 GATA3 JASPAR yes 70340463
chr6 28080755 28080776 IRF1 JASPAR yes 70340464
chr6 28080757 28080778 IRF1 JASPAR yes 70340465
chr6 28080761 28080775 IRF7 JASPAR yes 70340466
chr6 28080761 28080782 IRF1 JASPAR yes 70340467
chr6 28080762 28080777 FOXP1 JASPAR yes 70340468
chr6 28080762 28080783 IRF1 JASPAR yes 70340469
chr6 28080763 28080778 PRDM1 JASPAR yes 70340470
chr6 28080763 28080784 IRF1 JASPAR yes 70340471
chr6 28080767 28080788 IRF1 JASPAR yes 70340472
chr6 28080768 28080783 FOXP1 JASPAR yes 70340473
chr6 28080768 28080789 IRF1 JASPAR yes 70340474
chr6 28080769 28080790 IRF1 JASPAR yes 70340475
chr6 28080770 28080785 FOXP1 JASPAR yes 70340476
chr6 28080770 28080791 IRF1 JASPAR yes 70340477
chr6 28080772 28080787 FOXP1 JASPAR yes 70340478
chr6 28080773 28080788 FOXP1 JASPAR yes 70340479
chr6 28080774 28080789 FOXP1 JASPAR yes 70340480
chr6 28080775 28080790 FOXP1 JASPAR yes 70340481
chr6 28080776 28080791 FOXP1 JASPAR yes 70340482
chr6 28080777 28080792 FOXP1 JASPAR yes 70340483
SNP sites on vista51464[chr6:28080593-28080792]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28080628 rs34588114 C A no 8934918
chr6 28080773 rs200185462 C T
FOXP1 IRF1 IRF7 PRDM1
8934919
chr6 28080777 rs68188794 T C
FOXP1 IRF1 PRDM1
8934920
chr6 28080779 rs575619254 T C
FOXP1 IRF1
8934921
Genes possibly regulated by vista51464[chr6:28080593-28080792]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28048753 28057341 + ZNF165 ENSG00000197279.3 28048753 0.79 1.0 6289 68160
chr6 28092338 28097860 + ZSCAN16 ENSG00000196812.4 28092338 0.69 0.99 6290 88454
chr6 28109688 28127250 + ZKSCAN8 ENSG00000198315.6 28109688 0.69 0.99 6291 71104
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51464[chr6:28080593-28080792]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results