EnhancerDB
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  3. vista51466[chr6:28101066-28101269]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51466[chr6:28101066-28101269]
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Tissue distribution of vista51466
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Transcription factor that possibly regulate vista51466[chr6:28101066-28101269]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28101069 28101084 FOXP1 JASPAR yes 70340496
chr6 28101069 28101084 FOXP1 JASPAR yes 100958630
chr6 28101071 28101092 IRF1 JASPAR yes 70340497
chr6 28101071 28101092 IRF1 JASPAR yes 100958631
chr6 28101076 28101091 FOXP1 JASPAR yes 70340498
chr6 28101076 28101091 FOXP1 JASPAR yes 100958632
chr6 28101076 28101097 IRF1 JASPAR yes 70340499
chr6 28101076 28101097 IRF1 JASPAR yes 100958633
chr6 28101078 28101098 RREB1 JASPAR yes 70340500
chr6 28101078 28101098 RREB1 JASPAR yes 100958634
chr6 28101081 28101093 IRF1 JASPAR yes 70340501
chr6 28101081 28101093 IRF1 JASPAR yes 100958635
chr6 28101081 28101096 FOXP1 JASPAR yes 70340502
chr6 28101081 28101096 FOXP1 JASPAR yes 100958636
chr6 28101082 28101103 IRF1 JASPAR yes 70340503
chr6 28101082 28101103 IRF1 JASPAR yes 100958637
chr6 28101083 28101103 RREB1 JASPAR yes 70340504
chr6 28101083 28101103 RREB1 JASPAR yes 100958638
chr6 28101086 28101101 FOXP1 JASPAR yes 70340505
chr6 28101086 28101101 FOXP1 JASPAR yes 100958639
chr6 28101087 28101108 IRF1 JASPAR yes 70340506
chr6 28101087 28101108 IRF1 JASPAR yes 100958640
chr6 28101089 28101104 IRF9 JASPAR yes 70340507
chr6 28101089 28101104 IRF9 JASPAR yes 100958641
chr6 28101176 28101191 STAT2 JASPAR yes 70340508
chr6 28101176 28101191 STAT2 JASPAR yes 100958642
chr6 28101181 28101196 FOXP1 JASPAR yes 70340509
chr6 28101181 28101196 FOXP1 JASPAR yes 100958643
chr6 28101213 28101217 YY1 TRANSFAC yes 70340510
chr6 28101213 28101217 YY1 TRANSFAC yes 100958644
chr6 28101233 28101236 MYB TRANSFAC yes 70340511
chr6 28101233 28101236 MYB TRANSFAC yes 100958645
chr6 28101241 28101249 HOXA5 JASPAR yes 70340512
chr6 28101241 28101249 HOXA5 JASPAR yes 100958646
chr6 28101242 28101252 HOXB2 JASPAR yes 70340513
chr6 28101242 28101252 MEOX1 JASPAR yes 70340514
chr6 28101242 28101252 MEOX2 JASPAR yes 70340515
chr6 28101242 28101252 HOXB2 JASPAR yes 100958647
chr6 28101242 28101252 MEOX1 JASPAR yes 100958648
chr6 28101242 28101252 MEOX2 JASPAR yes 100958649
SNP sites on vista51466[chr6:28101066-28101269]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28101068 rs11346352 GA G no 8934946
chr6 28101068 rs796583609 GA G no 8934947
chr6 28101097 rs6920623 A C
FOXP1 IRF1 IRF9 RREB1
8934948
chr6 28101143 rs138575514 A C no 8934949
chr6 28101237 rs559370682 C T no 8934950
Genes possibly regulated by vista51466[chr6:28101066-28101269]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28048753 28057341 + ZNF165 ENSG00000197279.3 28048753 0.79 1.0 6289 47687
chr6 28092338 28097860 + ZSCAN16 ENSG00000196812.4 28092338 0.69 0.99 6290 91272
chr6 28109688 28127250 + ZKSCAN8 ENSG00000198315.6 28109688 0.69 0.99 6291 91581
chr6 28192664 28201260 + ZSCAN9 ENSG00000137185.7 28192664 0.78 0.99 6292 8605
Expression level of Genes
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miRNAs possibly regulated by vista51466[chr6:28101066-28101269]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results