EnhancerDB
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  3. vista51468[chr6:28180543-28180884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51468[chr6:28180543-28180884]
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Tissue distribution of vista51468
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Transcription factor that possibly regulate vista51468[chr6:28180543-28180884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28180260 28181045 MAX UCSC Txn Factor no Conserved 108539379
chr6 28180519 28181174 JUND UCSC Txn Factor no Conserved 108539380
chr6 28180528 28180992 CEBPB UCSC Txn Factor no Conserved 108539381
chr6 28180554 28181026 TBP UCSC Txn Factor no Conserved 108539382
chr6 28180575 28181006 ZNF263 UCSC Txn Factor no Conserved 108539383
chr6 28180590 28181177 RPC155 UCSC Txn Factor no Conserved 108539384
chr6 28180613 28180947 RUNX3 UCSC Txn Factor no Conserved 108539385
chr6 28180637 28181082 ATF3 UCSC Txn Factor no Conserved 108539386
chr6 28180653 28180886 BDP1 UCSC Txn Factor no Conserved 108539387
chr6 28180708 28180958 TEAD4 UCSC Txn Factor no Conserved 108539388
chr6 28180710 28181057 MAFK UCSC Txn Factor no Conserved 108539389
chr6 28180750 28181019 GTF3C2 UCSC Txn Factor no Conserved 108539390
chr6 28180549 28180553 ESR1 TRANSFAC yes 70340542
chr6 28180549 28180553 ESR1 TRANSFAC yes 100961530
chr6 28180550 28180558 FOXO3 JASPAR yes 70340543
chr6 28180550 28180558 FOXO3 JASPAR yes 100961531
chr6 28180561 28180571 FIGLA JASPAR yes 70340544
chr6 28180561 28180571 FIGLA JASPAR yes 100961532
chr6 28180580 28180584 H1TF2 TRANSFAC yes 70340545
chr6 28180580 28180584 NFE TRANSFAC yes 70340546
chr6 28180580 28180584 SRF TRANSFAC yes 70340547
chr6 28180580 28180584 H1TF2 TRANSFAC yes 100961533
chr6 28180580 28180584 NFE TRANSFAC yes 100961534
chr6 28180580 28180584 SRF TRANSFAC yes 100961535
chr6 28180603 28180618 MEF2A JASPAR yes 70340548
chr6 28180603 28180618 MEF2A JASPAR yes 100961536
chr6 28180605 28180617 MEF2A JASPAR yes 70340549
chr6 28180605 28180617 MEF2B JASPAR yes 70340550
chr6 28180605 28180617 MEF2D JASPAR yes 70340551
chr6 28180605 28180617 MEF2A JASPAR yes 100961537
chr6 28180605 28180617 MEF2B JASPAR yes 100961538
chr6 28180605 28180617 MEF2D JASPAR yes 100961539
chr6 28180606 28180616 MEF2A JASPAR yes 70340552
chr6 28180606 28180616 MEF2A JASPAR yes 100961540
chr6 28180617 28180621 YY1 TRANSFAC yes 70340553
chr6 28180617 28180621 YY1 TRANSFAC yes 100961541
chr6 28180619 28180629 NFIA JASPAR yes 70340554
chr6 28180619 28180629 NFIA JASPAR yes 100961542
chr6 28180621 28180627 NFIC JASPAR yes 70340555
chr6 28180621 28180627 NFIC JASPAR yes 100961543
chr6 28180628 28180631 MYB TRANSFAC yes 70340556
chr6 28180628 28180631 MYB TRANSFAC yes 100961544
chr6 28180646 28180658 PKNOX1 JASPAR yes 70340557
chr6 28180646 28180658 PKNOX2 JASPAR yes 70340558
chr6 28180646 28180658 TGIF1 JASPAR yes 70340559
chr6 28180646 28180658 TGIF2 JASPAR yes 70340560
chr6 28180646 28180658 PKNOX1 JASPAR yes 100961545
chr6 28180646 28180658 PKNOX2 JASPAR yes 100961546
chr6 28180646 28180658 TGIF1 JASPAR yes 100961547
chr6 28180646 28180658 TGIF2 JASPAR yes 100961548
chr6 28180656 28180660 YY1 TRANSFAC yes 70340561
chr6 28180656 28180660 YY1 TRANSFAC yes 100961549
chr6 28180658 28180668 HOXA13 JASPAR yes 70340562
chr6 28180658 28180668 HOXB13 JASPAR yes 70340563
chr6 28180658 28180668 HOXD13 JASPAR yes 70340564
chr6 28180658 28180668 HOXA13 JASPAR yes 100961550
chr6 28180658 28180668 HOXB13 JASPAR yes 100961551
chr6 28180658 28180668 HOXD13 JASPAR yes 100961552
chr6 28180658 28180669 HOXA10 JASPAR yes 70340565
chr6 28180658 28180669 HOXA10 JASPAR yes 100961553
chr6 28180659 28180668 CDX1 JASPAR yes 70340566
chr6 28180659 28180668 CDX1 JASPAR yes 100961554
chr6 28180662 28180674 ZBTB7B JASPAR yes 70340567
chr6 28180662 28180674 ZBTB7C JASPAR yes 70340568
chr6 28180662 28180674 ZBTB7B JASPAR yes 100961555
chr6 28180662 28180674 ZBTB7C JASPAR yes 100961556
chr6 28180667 28180678 TBX20 JASPAR yes 70340569
chr6 28180667 28180678 TBX20 JASPAR yes 100961557
chr6 28180668 28180679 CEBPA JASPAR yes 70340570
chr6 28180668 28180679 CEBPA JASPAR yes 100961558
chr6 28180669 28180679 CEBPB JASPAR yes 70340571
chr6 28180669 28180679 CEBPD JASPAR yes 70340572
chr6 28180669 28180679 CEBPE JASPAR yes 70340573
chr6 28180669 28180679 CEBPB JASPAR yes 100961559
chr6 28180669 28180679 CEBPD JASPAR yes 100961560
chr6 28180669 28180679 CEBPE JASPAR yes 100961561
chr6 28180669 28180680 CEBPB JASPAR yes 70340574
chr6 28180669 28180680 CEBPB JASPAR yes 100961562
chr6 28180673 28180685 PKNOX1 JASPAR yes 70340575
chr6 28180673 28180685 TGIF2 JASPAR yes 70340576
chr6 28180673 28180685 PKNOX1 JASPAR yes 100961563
chr6 28180673 28180685 TGIF2 JASPAR yes 100961564
chr6 28180683 28180693 ALX3 JASPAR yes 70340577
chr6 28180683 28180693 MIXL1 JASPAR yes 70340578
chr6 28180683 28180693 NOTO JASPAR yes 70340579
chr6 28180683 28180693 POU6F1 JASPAR yes 70340580
chr6 28180683 28180693 ALX3 JASPAR yes 100961565
chr6 28180683 28180693 MIXL1 JASPAR yes 100961566
chr6 28180683 28180693 NOTO JASPAR yes 100961567
chr6 28180683 28180693 POU6F1 JASPAR yes 100961568
chr6 28180684 28180692 ISX JASPAR yes 70340581
chr6 28180684 28180692 LMX1A JASPAR yes 70340582
chr6 28180684 28180692 LMX1B JASPAR yes 70340583
chr6 28180684 28180692 NKX6-1 JASPAR yes 70340584
chr6 28180684 28180692 NKX6-2 JASPAR yes 70340585
chr6 28180684 28180692 PRRX1 JASPAR yes 70340586
chr6 28180684 28180692 RAX2 JASPAR yes 70340587
chr6 28180684 28180692 SHOX JASPAR yes 70340588
chr6 28180684 28180692 UNCX JASPAR yes 70340589
chr6 28180684 28180692 VAX1 JASPAR yes 70340590
chr6 28180684 28180692 ISX JASPAR yes 100961569
chr6 28180684 28180692 LMX1A JASPAR yes 100961570
chr6 28180684 28180692 LMX1B JASPAR yes 100961571
chr6 28180684 28180692 NKX6-1 JASPAR yes 100961572
chr6 28180684 28180692 NKX6-2 JASPAR yes 100961573
chr6 28180684 28180692 PRRX1 JASPAR yes 100961574
chr6 28180684 28180692 RAX2 JASPAR yes 100961575
chr6 28180684 28180692 SHOX JASPAR yes 100961576
chr6 28180684 28180692 UNCX JASPAR yes 100961577
chr6 28180684 28180692 VAX1 JASPAR yes 100961578
chr6 28180691 28180703 PKNOX2 JASPAR yes 70340591
chr6 28180691 28180703 PKNOX2 JASPAR yes 100961579
chr6 28180692 28180702 ID4 JASPAR yes 70340592
chr6 28180692 28180702 SREBF2 JASPAR yes 70340593
chr6 28180692 28180702 ID4 JASPAR yes 100961580
chr6 28180692 28180702 SREBF2 JASPAR yes 100961581
chr6 28180693 28180702 SNAI2 JASPAR yes 70340594
chr6 28180693 28180702 SNAI2 JASPAR yes 100961582
chr6 28180694 28180699 USF2 TRANSFAC yes 70340595
chr6 28180694 28180699 USF2 TRANSFAC yes 100961583
chr6 28180696 28180707 FOS JASPAR yes 70340596
chr6 28180696 28180707 FOSL1 JASPAR yes 70340597
chr6 28180696 28180707 JUND JASPAR yes 70340598
chr6 28180696 28180707 FOS JASPAR yes 100961584
chr6 28180696 28180707 FOSL1 JASPAR yes 100961585
chr6 28180696 28180707 JUND JASPAR yes 100961586
chr6 28180697 28180711 JUN JASPAR yes 70340599
chr6 28180697 28180711 JUN JASPAR yes 100961587
chr6 28180698 28180709 BATF JASPAR yes 70340600
chr6 28180698 28180709 BATF JASPAR yes 100961588
chr6 28180702 28180717 RUNX2 JASPAR yes 70340601
chr6 28180702 28180717 RUNX2 JASPAR yes 100961589
chr6 28180705 28180716 RUNX1 JASPAR yes 70340602
chr6 28180705 28180716 RUNX1 JASPAR yes 100961590
chr6 28180706 28180716 RUNX3 JASPAR yes 70340603
chr6 28180706 28180716 RUNX3 JASPAR yes 100961591
chr6 28180707 28180716 RUNX2 JASPAR yes 70340604
chr6 28180707 28180716 RUNX2 JASPAR yes 100961592
chr6 28180716 28180721 TFAP2A TRANSFAC yes 70340605
chr6 28180716 28180721 TFAP2A TRANSFAC yes 100961593
chr6 28180716 28180722 MZF1 JASPAR yes 70340606
chr6 28180716 28180722 MZF1 JASPAR yes 100961594
chr6 28180717 28180727 GSC2 JASPAR yes 70340607
chr6 28180717 28180727 GSC JASPAR yes 70340608
chr6 28180717 28180727 GSC2 JASPAR yes 100961595
chr6 28180717 28180727 GSC JASPAR yes 100961596
chr6 28180718 28180726 OTX1 JASPAR yes 70340609
chr6 28180718 28180726 OTX2 JASPAR yes 70340610
chr6 28180718 28180726 RHOXF1 JASPAR yes 70340611
chr6 28180718 28180726 OTX1 JASPAR yes 100961597
chr6 28180718 28180726 OTX2 JASPAR yes 100961598
chr6 28180718 28180726 RHOXF1 JASPAR yes 100961599
chr6 28180718 28180727 PITX3 JASPAR yes 70340612
chr6 28180718 28180727 PITX3 JASPAR yes 100961600
chr6 28180724 28180737 ELF1 JASPAR yes 70340613
chr6 28180724 28180737 ELF1 JASPAR yes 100961601
chr6 28180735 28180744 VENTX JASPAR yes 70340614
chr6 28180735 28180744 VENTX JASPAR yes 100961602
chr6 28180736 28180749 DUXA JASPAR yes 70340615
chr6 28180736 28180749 DUXA JASPAR yes 100961603
chr6 28180738 28180753 JUND JASPAR yes 70340616
chr6 28180738 28180753 JUND JASPAR yes 100961604
chr6 28180739 28180752 JUN JASPAR yes 70340617
chr6 28180739 28180752 JUN JASPAR yes 100961605
chr6 28180743 28180763 TP63 JASPAR yes 70340618
chr6 28180743 28180763 TP63 JASPAR yes 100961606
chr6 28180744 28180762 TP63 JASPAR yes 70340619
chr6 28180744 28180762 TP63 JASPAR yes 100961607
chr6 28180746 28180761 TP53 JASPAR yes 70340620
chr6 28180746 28180761 TP53 JASPAR yes 100961608
chr6 28180793 28180806 SCRT2 JASPAR yes 70340621
chr6 28180793 28180806 SCRT2 JASPAR yes 100961609
chr6 28180798 28180809 FOXH1 JASPAR yes 70340622
chr6 28180798 28180809 FOXH1 JASPAR yes 100961610
chr6 28180806 28180812 SOX10 JASPAR yes 70340623
chr6 28180806 28180812 SOX10 JASPAR yes 100961611
chr6 28180847 28180856 PITX3 JASPAR yes 70340624
chr6 28180847 28180856 PITX3 JASPAR yes 100961612
chr6 28180847 28180857 GSC JASPAR yes 70340625
chr6 28180847 28180857 GSC JASPAR yes 100961613
chr6 28180853 28180862 SOX9 JASPAR yes 70340626
chr6 28180853 28180862 SOX9 JASPAR yes 100961614
chr6 28180868 28180873 MYC TRANSFAC yes 70340627
chr6 28180868 28180873 USF1 TRANSFAC yes 70340628
chr6 28180868 28180873 USF2 TRANSFAC yes 70340629
chr6 28180868 28180873 MYC TRANSFAC yes 100961615
chr6 28180868 28180873 USF1 TRANSFAC yes 100961616
chr6 28180868 28180873 USF2 TRANSFAC yes 100961617
chr6 28180868 28180875 USF1 JASPAR yes 70340630
chr6 28180868 28180875 USF1 JASPAR yes 100961618
SNP sites on vista51468[chr6:28180543-28180884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28180657 rs116563181 C T
ATF3 BDP1 CEBPB JUND MAX PKNOX1 PKNOX2 RPC155 RUNX3 TBP TGIF1 TGIF2 YY1 ZNF263
8935224
chr6 28180732 rs397783322 G GA
ATF3 BDP1 CEBPB ELF1 JUND MAFK MAX RPC155 RUNX3 TBP TEAD4 ZNF263
8935225
chr6 28180732 rs5875151 G GA
ATF3 BDP1 CEBPB ELF1 JUND MAFK MAX RPC155 RUNX3 TBP TEAD4 ZNF263
8935226
chr6 28180801 rs141405976 T C
ATF3 BDP1 CEBPB FOXH1 GTF3C2 JUND MAFK MAX RPC155 RUNX3 SCRT2 TBP TEAD4 ZNF263
8935227
chr6 28180805 rs542771028 T A,C
ATF3 BDP1 CEBPB FOXH1 GTF3C2 JUND MAFK MAX RPC155 RUNX3 SCRT2 TBP TEAD4 ZNF263
8935228
chr6 28180809 rs181329919 T C
ATF3 BDP1 CEBPB FOXH1 GTF3C2 JUND MAFK MAX RPC155 RUNX3 SOX10 TBP TEAD4 ZNF263
8935229
chr6 28180818 rs76094573 G C
ATF3 BDP1 CEBPB GTF3C2 JUND MAFK MAX RPC155 RUNX3 TBP TEAD4 ZNF263
8935230
chr6 28180870 rs78966053 A C,G
ATF3 BDP1 CEBPB GTF3C2 JUND MAFK MAX MYC RPC155 RUNX3 TBP TEAD4 USF1 USF2 ZNF263
8935231
Genes possibly regulated by vista51468[chr6:28180543-28180884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28092338 28097860 + ZSCAN16 ENSG00000196812.4 28092338 0.69 0.99 6290 11795
chr6 28109688 28127250 + ZKSCAN8 ENSG00000198315.6 28109688 0.69 0.99 6291 29145
chr6 28192664 28201260 + ZSCAN9 ENSG00000137185.7 28192664 0.78 0.99 6292 88220
chr6 28212401 28227011 - ZKSCAN4 ENSG00000187626.7 28227011 0.74 0.99 6293 53873
chr6 28227098 28228736 + NKAPL ENSG00000189134.3 28227098 0.73 0.0 6294 53786
chr6 28249314 28270326 + PGBD1 ENSG00000137338.4 28249314 0.66 0.99 6295 31570
Expression level of Genes
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miRNAs possibly regulated by vista51468[chr6:28180543-28180884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results