EnhancerDB
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  3. vista51473[chr6:28302002-28302386]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51473[chr6:28302002-28302386]
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Tissue distribution of vista51473
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Transcription factor that possibly regulate vista51473[chr6:28302002-28302386]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28302005 28302020 TFAP2C JASPAR yes 70340817
chr6 28302006 28302017 EBF1 JASPAR yes 70340818
chr6 28302008 28302021 ELF1 JASPAR yes 70340819
chr6 28302011 28302017 PEA3 TRANSFAC yes 70340820
chr6 28302011 28302021 ETV6 JASPAR yes 70340821
chr6 28302011 28302022 ELK4 JASPAR yes 70340822
chr6 28302011 28302022 FLI1 JASPAR yes 70340823
chr6 28302012 28302020 EHF JASPAR yes 70340824
chr6 28302013 28302020 SPI1 JASPAR yes 70340825
chr6 28302041 28302054 DUXA JASPAR yes 70340826
chr6 28302042 28302053 DUX4 JASPAR yes 70340827
chr6 28302045 28302061 POU4F2 JASPAR yes 70340828
chr6 28302065 28302076 FOXH1 JASPAR yes 70340829
chr6 28302069 28302075 ZNF354C JASPAR yes 70340830
chr6 28302073 28302079 SOX10 JASPAR yes 70340831
chr6 28302076 28302081 ETS2 TRANSFAC yes 70340832
chr6 28302084 28302088 YY1 TRANSFAC yes 70340833
chr6 28302086 28302106 TBX19 JASPAR yes 70340834
chr6 28302091 28302106 FOXA1 JASPAR yes 70340835
chr6 28302093 28302105 FOXC2 JASPAR yes 70340836
chr6 28302094 28302105 FOXB1 JASPAR yes 70340837
chr6 28302094 28302105 FOXC1 JASPAR yes 70340838
chr6 28302095 28302099 YY1 TRANSFAC yes 70340839
chr6 28302101 28302110 NKX3-2 JASPAR yes 70340840
chr6 28302104 28302118 FOXF2 JASPAR yes 70340841
chr6 28302105 28302113 FOXD1 JASPAR yes 70340842
chr6 28302105 28302113 FOXG1 JASPAR yes 70340843
chr6 28302105 28302113 FOXO3 JASPAR yes 70340844
chr6 28302106 28302113 FOXD2 JASPAR yes 70340845
chr6 28302106 28302113 FOXI1 JASPAR yes 70340846
chr6 28302106 28302113 FOXL1 JASPAR yes 70340847
chr6 28302106 28302113 FOXO4 JASPAR yes 70340848
chr6 28302106 28302113 FOXO6 JASPAR yes 70340849
chr6 28302106 28302113 FOXP3 JASPAR yes 70340850
chr6 28302106 28302116 HOXD11 JASPAR yes 70340851
chr6 28302106 28302117 HOXC13 JASPAR yes 70340852
chr6 28302106 28302117 HOXD12 JASPAR yes 70340853
chr6 28302113 28302124 TBX2 JASPAR yes 70340854
chr6 28302114 28302122 TBX15 JASPAR yes 70340855
chr6 28302114 28302122 TBX1 JASPAR yes 70340856
chr6 28302114 28302122 TBX4 JASPAR yes 70340857
chr6 28302114 28302122 TBX5 JASPAR yes 70340858
chr6 28302114 28302127 SMAD2 JASPAR yes 70340859
chr6 28302124 28302145 IRF1 JASPAR yes 70340860
chr6 28302134 28302143 SRY JASPAR yes 70340861
chr6 28302136 28302145 SOX9 JASPAR yes 70340862
chr6 28302137 28302153 SOX8 JASPAR yes 70340863
chr6 28302158 28302164 MZF1 JASPAR yes 70340864
chr6 28302164 28302168 NFE TRANSFAC yes 70340865
chr6 28302178 28302189 FOXC1 JASPAR yes 70340866
chr6 28302183 28302195 YY1 JASPAR yes 70340867
chr6 28302197 28302211 TCF7L2 JASPAR yes 70340868
chr6 28302197 28302212 LEF1 JASPAR yes 70340869
chr6 28302202 28302217 PRDM1 JASPAR yes 70340870
chr6 28302210 28302222 FOXC2 JASPAR yes 70340871
chr6 28302211 28302222 FOXB1 JASPAR yes 70340872
chr6 28302211 28302222 FOXC1 JASPAR yes 70340873
chr6 28302212 28302220 FOXO3 JASPAR yes 70340874
chr6 28302212 28302223 FOXA1 JASPAR yes 70340875
chr6 28302217 28302237 TP53 JASPAR yes 70340876
chr6 28302228 28302240 FOXC2 JASPAR yes 70340877
chr6 28302229 28302240 FOXB1 JASPAR yes 70340878
chr6 28302229 28302240 FOXC1 JASPAR yes 70340879
chr6 28302230 28302238 FOXO3 JASPAR yes 70340880
chr6 28302230 28302241 FOXA1 JASPAR yes 70340881
chr6 28302235 28302249 XBP1 JASPAR yes 70340882
chr6 28302236 28302250 BATF3 JASPAR yes 70340883
chr6 28302236 28302250 CREB3 JASPAR yes 70340884
chr6 28302238 28302256 MAFF JASPAR yes 70340885
chr6 28302239 28302254 MAFK JASPAR yes 70340886
chr6 28302241 28302246 ATF1 TRANSFAC yes 70340887
chr6 28302243 28302254 NRL JASPAR yes 70340888
chr6 28302245 28302259 POU4F1 JASPAR yes 70340889
chr6 28302245 28302261 POU4F2 JASPAR yes 70340890
chr6 28302245 28302261 POU4F3 JASPAR yes 70340891
chr6 28302248 28302258 ESX1 JASPAR yes 70340892
chr6 28302248 28302258 EVX2 JASPAR yes 70340893
chr6 28302248 28302258 HOXA2 JASPAR yes 70340894
chr6 28302248 28302258 HOXB2 JASPAR yes 70340895
chr6 28302249 28302257 LMX1A JASPAR yes 70340896
chr6 28302249 28302257 LMX1B JASPAR yes 70340897
chr6 28302249 28302257 NKX6-1 JASPAR yes 70340898
chr6 28302249 28302257 NKX6-2 JASPAR yes 70340899
chr6 28302249 28302257 VAX1 JASPAR yes 70340900
chr6 28302249 28302257 VAX2 JASPAR yes 70340901
chr6 28302249 28302257 VSX1 JASPAR yes 70340902
chr6 28302249 28302257 VSX2 JASPAR yes 70340903
chr6 28302254 28302257 MYB TRANSFAC yes 70340904
chr6 28302265 28302271 SOX10 JASPAR yes 70340905
chr6 28302273 28302285 POU2F1 JASPAR yes 70340906
chr6 28302273 28302286 POU3F3 JASPAR yes 70340907
chr6 28302273 28302287 POU1F1 JASPAR yes 70340908
chr6 28302274 28302286 POU3F1 JASPAR yes 70340909
chr6 28302274 28302286 POU3F2 JASPAR yes 70340910
chr6 28302274 28302287 POU2F2 JASPAR yes 70340911
chr6 28302275 28302284 POU5F1B JASPAR yes 70340912
chr6 28302297 28302308 HOXC11 JASPAR yes 70340913
chr6 28302297 28302308 HOXC12 JASPAR yes 70340914
chr6 28302298 28302308 HOXD11 JASPAR yes 70340915
chr6 28302309 28302323 EBF1 JASPAR yes 70340916
chr6 28302318 28302323 GATA2 JASPAR yes 70340917
chr6 28302322 28302332 EN2 JASPAR yes 70340918
chr6 28302322 28302332 GBX1 JASPAR yes 70340919
chr6 28302322 28302332 GBX2 JASPAR yes 70340920
chr6 28302323 28302327 H1TF2 TRANSFAC yes 70340921
chr6 28302323 28302327 NFE TRANSFAC yes 70340922
chr6 28302323 28302327 SRF TRANSFAC yes 70340923
chr6 28302323 28302331 BSX JASPAR yes 70340924
chr6 28302323 28302331 DLX6 JASPAR yes 70340925
chr6 28302323 28302331 MSX1 JASPAR yes 70340926
chr6 28302323 28302331 MSX2 JASPAR yes 70340927
chr6 28302334 28302349 FOXP1 JASPAR yes 70340928
chr6 28302337 28302348 FOXP2 JASPAR yes 70340929
SNP sites on vista51473[chr6:28302002-28302386]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28302025 rs145351161 G A no 8935553
chr6 28302113 rs16893973 C T
FOXD1 FOXD2 FOXF2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP3 HOXC13 HOXD11 HOXD12 TBX2
8935554
chr6 28302159 rs58217293 TC T
MZF1
8935555
chr6 28302159 rs796708481 TC T
MZF1
8935556
chr6 28302278 rs16893975 T C
POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU5F1B
8935557
Genes possibly regulated by vista51473[chr6:28302002-28302386]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28212401 28227011 - ZKSCAN4 ENSG00000187626.7 28227011 0.74 0.99 6293 25009
chr6 28227098 28228736 + NKAPL ENSG00000189134.3 28227098 0.73 0.0 6294 25096
chr6 28249314 28270326 + PGBD1 ENSG00000137338.4 28249314 0.66 0.99 6295 47312
chr6 28292470 28324048 - ZSCAN31 ENSG00000235109.3 28324048 0.67 0.99 6296 78338
chr6 28317691 28336947 + ZKSCAN3 ENSG00000189298.9 28317691 0.73 0.99 6297 84695
chr6 28346732 28367511 - ZSCAN12 ENSG00000158691.10 28367511 0.73 0.91 6298 34875
Expression level of Genes
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miRNAs possibly regulated by vista51473[chr6:28302002-28302386]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results