EnhancerDB
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  3. vista51474[chr6:28414953-28415259]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51474[chr6:28414953-28415259]
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Tissue distribution of vista51474
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Transcription factor that possibly regulate vista51474[chr6:28414953-28415259]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28415000 28415010 SP1 JASPAR yes 70340930
chr6 28415000 28415021 ZNF263 JASPAR yes 70340931
chr6 28415011 28415016 SP1 TRANSFAC yes 70340932
chr6 28415011 28415017 SP1 TRANSFAC yes 70340933
chr6 28415012 28415020 SP1 TRANSFAC yes 70340934
chr6 28415012 28415020 WT1 TRANSFAC yes 70340935
chr6 28415014 28415021 SP1 TRANSFAC yes 70340936
chr6 28415014 28415024 SP1 JASPAR yes 70340937
chr6 28415016 28415021 SP1 TRANSFAC yes 70340938
chr6 28415043 28415046 MYB TRANSFAC yes 70340939
chr6 28415051 28415070 RFX2 JASPAR yes 70340940
chr6 28415053 28415068 RFX5 JASPAR yes 70340941
chr6 28415054 28415058 NFE TRANSFAC yes 70340942
chr6 28415061 28415070 HIC2 JASPAR yes 70340943
chr6 28415064 28415068 LFA1 TRANSFAC yes 70340944
chr6 28415068 28415080 INSM1 JASPAR yes 70340945
chr6 28415090 28415104 SPI1 JASPAR yes 70340946
chr6 28415131 28415149 MAFF JASPAR yes 70340947
chr6 28415132 28415147 MAFK JASPAR yes 70340948
chr6 28415136 28415147 NRL JASPAR yes 70340949
chr6 28415149 28415153 ESR1 TRANSFAC yes 70340950
chr6 28415167 28415172 MYB TRANSFAC yes 70340951
chr6 28415169 28415177 FOXO3 JASPAR yes 70340952
chr6 28415172 28415184 YY1 JASPAR yes 70340953
chr6 28415196 28415207 HOXC11 JASPAR yes 70340954
chr6 28415196 28415207 HOXD12 JASPAR yes 70340955
chr6 28415197 28415207 HOXC10 JASPAR yes 70340956
chr6 28415197 28415207 HOXD11 JASPAR yes 70340957
chr6 28415199 28415203 YY1 TRANSFAC yes 70340958
chr6 28415208 28415211 MYB TRANSFAC yes 70340959
chr6 28415211 28415217 LEF1 TRANSFAC yes 70340960
chr6 28415211 28415217 TCF4 TRANSFAC yes 70340961
chr6 28415215 28415228 ZBTB18 JASPAR yes 70340962
chr6 28415242 28415257 HNF4A JASPAR yes 70340963
chr6 28415243 28415257 NR2F1 JASPAR yes 70340964
chr6 28415243 28415258 HNF4G JASPAR yes 70340965
SNP sites on vista51474[chr6:28414953-28415259]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28414961 rs192661394 C T no 8935761
chr6 28414965 rs531409381 G T no 8935762
chr6 28414967 rs16894116 G T no 8935763
chr6 28414976 rs571184455 G A no 8935764
chr6 28415065 rs184953607 G A
HIC2 LFA1 RFX2 RFX5
8935765
Genes possibly regulated by vista51474[chr6:28414953-28415259]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28292470 28324048 - ZSCAN31 ENSG00000235109.3 28324048 0.67 0.99 6296 9095
chr6 28317691 28336947 + ZKSCAN3 ENSG00000189298.9 28317691 0.73 0.99 6297 2738
chr6 28346732 28367511 - ZSCAN12 ENSG00000158691.10 28367511 0.73 0.91 6298 52558
chr6 28399707 28411279 - ZSCAN23 ENSG00000187987.5 28411279 0.9 0.79 6299 96326
chr6 28471073 28495992 - GPX6 ENSG00000198704.5 28495992 1.0 0.0 6300 19267
chr6 28493702 28502729 + GPX5 ENSG00000224586.2 28493702 0.95 1.0 6301 21557
Expression level of Genes
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miRNAs possibly regulated by vista51474[chr6:28414953-28415259]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results