EnhancerDB
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  3. vista51476[chr6:28521433-28521958]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51476[chr6:28521433-28521958]
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Tissue distribution of vista51476
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Transcription factor that possibly regulate vista51476[chr6:28521433-28521958]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28521416 28521437 ZNF263 JASPAR yes 70341134
chr6 28521416 28521437 ZNF263 JASPAR yes 100969559
chr6 28521418 28521439 IRF1 JASPAR yes 70341135
chr6 28521418 28521439 IRF1 JASPAR yes 100969560
chr6 28521419 28521440 ZNF263 JASPAR yes 70341136
chr6 28521419 28521440 ZNF263 JASPAR yes 100969561
chr6 28521423 28521444 ZNF263 JASPAR yes 70341137
chr6 28521423 28521444 ZNF263 JASPAR yes 100969562
chr6 28521429 28521450 ZNF263 JASPAR yes 70341138
chr6 28521429 28521450 ZNF263 JASPAR yes 100969563
chr6 28521430 28521451 ZNF263 JASPAR yes 70341139
chr6 28521430 28521451 ZNF263 JASPAR yes 100969564
chr6 28521432 28521446 SPIC JASPAR yes 70341140
chr6 28521432 28521446 SPIC JASPAR yes 100969565
chr6 28521432 28521453 ZNF263 JASPAR yes 70341141
chr6 28521432 28521453 ZNF263 JASPAR yes 100969566
chr6 28521438 28521459 IRF1 JASPAR yes 70341142
chr6 28521438 28521459 IRF1 JASPAR yes 100969567
chr6 28521439 28521445 PEA3 TRANSFAC yes 70341143
chr6 28521439 28521445 PEA3 TRANSFAC yes 100969568
chr6 28521439 28521460 ZNF263 JASPAR yes 70341144
chr6 28521439 28521460 ZNF263 JASPAR yes 100969569
chr6 28521440 28521461 ZNF263 JASPAR yes 70341145
chr6 28521440 28521461 ZNF263 JASPAR yes 100969570
chr6 28521442 28521456 SPI1 JASPAR yes 70341146
chr6 28521442 28521456 SPI1 JASPAR yes 100969571
chr6 28521442 28521457 STAT2 JASPAR yes 70341147
chr6 28521442 28521457 STAT2 JASPAR yes 100969572
chr6 28521443 28521464 ZNF263 JASPAR yes 70341148
chr6 28521443 28521464 ZNF263 JASPAR yes 100969573
chr6 28521446 28521453 SPIB JASPAR yes 70341149
chr6 28521446 28521453 SPIB JASPAR yes 100969574
chr6 28521446 28521467 ZNF263 JASPAR yes 70341150
chr6 28521446 28521467 ZNF263 JASPAR yes 100969575
chr6 28521447 28521461 TCF7L2 JASPAR yes 70341151
chr6 28521447 28521461 TCF7L2 JASPAR yes 100969576
chr6 28521447 28521462 LEF1 JASPAR yes 70341152
chr6 28521447 28521462 LEF1 JASPAR yes 100969577
chr6 28521452 28521458 SOX10 JASPAR yes 70341153
chr6 28521452 28521458 SOX10 JASPAR yes 100969578
chr6 28521452 28521467 PRDM1 JASPAR yes 70341154
chr6 28521452 28521467 PRDM1 JASPAR yes 100969579
chr6 28521461 28521481 ESR1 JASPAR yes 70341155
chr6 28521461 28521481 ESR1 JASPAR yes 100969580
chr6 28521469 28521478 HIC2 JASPAR yes 70341156
chr6 28521469 28521478 HIC2 JASPAR yes 100969581
chr6 28521488 28521501 SMAD2 JASPAR yes 70341157
chr6 28521488 28521501 SMAD2 JASPAR yes 100969582
chr6 28521507 28521524 RARA JASPAR yes 70341158
chr6 28521507 28521524 RARA JASPAR yes 100969583
chr6 28521508 28521529 ZNF263 JASPAR yes 70341159
chr6 28521508 28521529 ZNF263 JASPAR yes 100969584
chr6 28521510 28521520 GABPA JASPAR yes 70341160
chr6 28521510 28521520 GABPA JASPAR yes 100969585
chr6 28521512 28521518 ETS1 JASPAR yes 70341161
chr6 28521512 28521518 SPI1 JASPAR yes 70341162
chr6 28521512 28521518 ETS1 JASPAR yes 100969586
chr6 28521512 28521518 SPI1 JASPAR yes 100969587
chr6 28521549 28521557 FOXO3 JASPAR yes 70341163
chr6 28521549 28521557 FOXO3 JASPAR yes 100969588
chr6 28521555 28521559 YY1 TRANSFAC yes 70341164
chr6 28521555 28521559 YY1 TRANSFAC yes 100969589
chr6 28521561 28521565 YY1 TRANSFAC yes 70341165
chr6 28521561 28521565 YY1 TRANSFAC yes 100969590
chr6 28521562 28521572 NFIA JASPAR yes 70341166
chr6 28521562 28521572 NFIA JASPAR yes 100969591
chr6 28521564 28521570 NFIC JASPAR yes 70341167
chr6 28521564 28521570 NFIC JASPAR yes 100969592
chr6 28521568 28521583 SOX21 JASPAR yes 70341168
chr6 28521568 28521583 SOX21 JASPAR yes 100969593
chr6 28521569 28521582 POU3F3 JASPAR yes 70341169
chr6 28521569 28521582 POU3F3 JASPAR yes 100969594
chr6 28521570 28521582 POU3F1 JASPAR yes 70341170
chr6 28521570 28521582 POU3F2 JASPAR yes 70341171
chr6 28521570 28521582 POU3F1 JASPAR yes 100969595
chr6 28521570 28521582 POU3F2 JASPAR yes 100969596
chr6 28521573 28521588 HNF1A JASPAR yes 70341172
chr6 28521573 28521588 HNF1A JASPAR yes 100969597
chr6 28521610 28521617 SPIB JASPAR yes 70341173
chr6 28521610 28521617 SPIB JASPAR yes 100969598
chr6 28521610 28521621 FLI1 JASPAR yes 70341174
chr6 28521610 28521621 FLI1 JASPAR yes 100969599
chr6 28521611 28521619 EHF JASPAR yes 70341175
chr6 28521611 28521619 EHF JASPAR yes 100969600
chr6 28521611 28521621 SP1 JASPAR yes 70341176
chr6 28521611 28521621 SP1 JASPAR yes 100969601
chr6 28521617 28521622 SP1 TRANSFAC yes 70341177
chr6 28521617 28521622 SP1 TRANSFAC yes 100969602
chr6 28521617 28521632 HNF4A JASPAR yes 70341178
chr6 28521617 28521632 HNF4A JASPAR yes 100969603
chr6 28521618 28521632 NR2F1 JASPAR yes 70341179
chr6 28521618 28521632 NR2F1 JASPAR yes 100969604
chr6 28521618 28521633 HNF4G JASPAR yes 70341180
chr6 28521618 28521633 HNF4G JASPAR yes 100969605
chr6 28521639 28521654 AR JASPAR yes 70341181
chr6 28521639 28521654 AR JASPAR yes 100969606
chr6 28521663 28521676 POU3F3 JASPAR yes 70341182
chr6 28521663 28521676 POU3F3 JASPAR yes 100969607
chr6 28521663 28521677 POU1F1 JASPAR yes 70341183
chr6 28521663 28521677 POU1F1 JASPAR yes 100969608
chr6 28521685 28521691 NFIC JASPAR yes 70341184
chr6 28521685 28521691 NFIC JASPAR yes 100969609
chr6 28521698 28521717 REST JASPAR yes 70341185
chr6 28521698 28521717 REST JASPAR yes 100969610
chr6 28521720 28521724 NFE TRANSFAC yes 70341186
chr6 28521720 28521724 NFE TRANSFAC yes 100969611
chr6 28521772 28521776 YY1 TRANSFAC yes 70341187
chr6 28521772 28521776 YY1 TRANSFAC yes 100969612
chr6 28521782 28521785 MYB TRANSFAC yes 70341188
chr6 28521782 28521785 MYB TRANSFAC yes 100969613
chr6 28521793 28521804 ESRRA JASPAR yes 70341189
chr6 28521793 28521804 ESRRA JASPAR yes 100969614
chr6 28521804 28521812 GATA5 JASPAR yes 70341190
chr6 28521804 28521812 GATA5 JASPAR yes 100969615
chr6 28521807 28521810 MYB TRANSFAC yes 70341191
chr6 28521807 28521810 MYB TRANSFAC yes 100969616
chr6 28521814 28521818 TEAD2 TRANSFAC yes 70341192
chr6 28521814 28521818 TEAD2 TRANSFAC yes 100969617
chr6 28521814 28521833 RFX2 JASPAR yes 70341193
chr6 28521814 28521833 RFX2 JASPAR yes 100969618
chr6 28521818 28521834 RFX2 JASPAR yes 70341194
chr6 28521818 28521834 RFX3 JASPAR yes 70341195
chr6 28521818 28521834 RFX4 JASPAR yes 70341196
chr6 28521818 28521834 RFX5 JASPAR yes 70341197
chr6 28521818 28521834 RFX2 JASPAR yes 100969619
chr6 28521818 28521834 RFX3 JASPAR yes 100969620
chr6 28521818 28521834 RFX4 JASPAR yes 100969621
chr6 28521818 28521834 RFX5 JASPAR yes 100969622
chr6 28521819 28521838 RFX2 JASPAR yes 70341198
chr6 28521819 28521838 RFX2 JASPAR yes 100969623
chr6 28521829 28521832 MYB TRANSFAC yes 70341199
chr6 28521829 28521832 MYB TRANSFAC yes 100969624
chr6 28521841 28521846 MYC TRANSFAC yes 70341200
chr6 28521841 28521846 MYC TRANSFAC yes 100969625
chr6 28521848 28521859 STAT3 JASPAR yes 70341201
chr6 28521848 28521859 STAT3 JASPAR yes 100969626
chr6 28521851 28521872 REST JASPAR yes 70341202
chr6 28521851 28521872 REST JASPAR yes 100969627
chr6 28521862 28521866 LFA1 TRANSFAC yes 70341203
chr6 28521862 28521866 LFA1 TRANSFAC yes 100969628
chr6 28521871 28521875 NFE TRANSFAC yes 70341204
chr6 28521871 28521875 NFE TRANSFAC yes 100969629
chr6 28521881 28521893 GRHL1 JASPAR yes 70341205
chr6 28521881 28521893 GRHL1 JASPAR yes 100969630
chr6 28521882 28521892 TFCP2 JASPAR yes 70341206
chr6 28521882 28521892 TFCP2 JASPAR yes 100969631
chr6 28521899 28521913 RXRB JASPAR yes 70341207
chr6 28521899 28521913 RXRG JASPAR yes 70341208
chr6 28521899 28521913 RXRB JASPAR yes 100969632
chr6 28521899 28521913 RXRG JASPAR yes 100969633
chr6 28521899 28521914 NR2C2 JASPAR yes 70341209
chr6 28521899 28521914 NR2C2 JASPAR yes 100969634
chr6 28521900 28521914 TCF7L2 JASPAR yes 70341210
chr6 28521900 28521914 TCF7L2 JASPAR yes 100969635
SNP sites on vista51476[chr6:28521433-28521958]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28521443 rs372201326 G A
IRF1 PEA3 SPI1 SPIC STAT2 ZNF263
8936079
chr6 28521530 rs186400134 A G no 8936080
chr6 28521551 rs145033994 G A
FOXO3
8936081
chr6 28521570 rs6926470 A C
NFIA NFIC POU3F1 POU3F2 POU3F3 SOX21
8936082
chr6 28521602 rs202136106 TAC T no 8936083
chr6 28521615 rs190859674 G A
EHF FLI1 SP1 SPIB
8936084
chr6 28521617 rs140214440 A AG
EHF FLI1 HNF4A SP1 SPIB
8936085
chr6 28521617 rs371637322 A AG
EHF FLI1 HNF4A SP1 SPIB
8936086
chr6 28521781 rs6942252 C T no 8936087
chr6 28521787 rs548290482 C T no 8936088
Genes possibly regulated by vista51476[chr6:28521433-28521958]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28471073 28495992 - GPX6 ENSG00000198704.5 28495992 1.0 0.0 6300 74559
chr6 28493702 28502729 + GPX5 ENSG00000224586.2 28493702 0.95 1.0 6301 72269
chr6 28539407 28583989 - SCAND3 ENSG00000232040.2 28583989 0.89 0.98 6302 37969
Expression level of Genes
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miRNAs possibly regulated by vista51476[chr6:28521433-28521958]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results