EnhancerDB
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  3. vista51479[chr6:28603148-28603326]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51479[chr6:28603148-28603326]
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Tissue distribution of vista51479
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Transcription factor that possibly regulate vista51479[chr6:28603148-28603326]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28603202 28603210 MEIS2 JASPAR yes 70341304
chr6 28603202 28603210 MEIS3 JASPAR yes 70341305
chr6 28603203 28603207 NFE TRANSFAC yes 70341306
chr6 28603224 28603236 E2F8 JASPAR yes 70341307
chr6 28603238 28603252 PLAG1 JASPAR yes 70341308
chr6 28603249 28603254 GATA2 JASPAR yes 70341309
chr6 28603259 28603265 SP1 TRANSFAC yes 70341310
chr6 28603259 28603269 SP1 JASPAR yes 70341311
chr6 28603266 28603287 ZNF263 JASPAR yes 70341312
chr6 28603269 28603290 ZNF263 JASPAR yes 70341313
chr6 28603273 28603278 SP1 TRANSFAC yes 70341314
chr6 28603273 28603279 SP1 TRANSFAC yes 70341315
chr6 28603276 28603286 SP1 JASPAR yes 70341316
chr6 28603276 28603287 FLI1 JASPAR yes 70341317
chr6 28603277 28603287 SP1 JASPAR yes 70341318
chr6 28603278 28603286 EHF JASPAR yes 70341319
chr6 28603292 28603309 NR3C2 JASPAR yes 70341320
chr6 28603294 28603309 AR JASPAR yes 70341321
SNP sites on vista51479[chr6:28603148-28603326]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28603210 rs572134420 TC T
MEIS2 MEIS3
8936395
Genes possibly regulated by vista51479[chr6:28603148-28603326]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28539407 28583989 - SCAND3 ENSG00000232040.2 28583989 0.89 0.98 6302 80841
Expression level of Genes
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miRNAs possibly regulated by vista51479[chr6:28603148-28603326]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results