EnhancerDB
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  3. vista51481[chr6:28715387-28715696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51481[chr6:28715387-28715696]
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Tissue distribution of vista51481
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Transcription factor that possibly regulate vista51481[chr6:28715387-28715696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28715257 28715761 EP300 UCSC Txn Factor no Conserved 108539416
chr6 28715278 28715741 TEAD4 UCSC Txn Factor no Conserved 108539417
chr6 28715281 28715725 TBP UCSC Txn Factor no Conserved 108539418
chr6 28715307 28716008 RPC155 UCSC Txn Factor no Conserved 108539419
chr6 28715333 28715950 ATF3 UCSC Txn Factor no Conserved 108539420
chr6 28715362 28715632 BDP1 UCSC Txn Factor no Conserved 108539421
chr6 28715407 28715763 GTF3C2 UCSC Txn Factor no Conserved 108539422
chr6 28715591 28715885 EGR1 UCSC Txn Factor no Conserved 108539423
chr6 28715390 28715396 MYC TRANSFAC yes 70341386
chr6 28715390 28715396 MYC TRANSFAC yes 100979059
chr6 28715416 28715421 GATA2 JASPAR yes 70341387
chr6 28715416 28715421 GATA2 JASPAR yes 100979060
chr6 28715428 28715439 PROP1 JASPAR yes 70341388
chr6 28715428 28715439 PROP1 JASPAR yes 100979061
chr6 28715442 28715453 CEBPB JASPAR yes 70341389
chr6 28715442 28715453 CEBPB JASPAR yes 100979062
chr6 28715442 28715455 ATF4 JASPAR yes 70341390
chr6 28715442 28715455 ATF4 JASPAR yes 100979063
chr6 28715443 28715454 CEBPA JASPAR yes 70341391
chr6 28715443 28715454 CEBPA JASPAR yes 100979064
chr6 28715474 28715485 CEBPB JASPAR yes 70341392
chr6 28715474 28715485 CEBPB JASPAR yes 100979065
chr6 28715524 28715529 GATA2 JASPAR yes 70341393
chr6 28715524 28715529 GATA2 JASPAR yes 100979066
chr6 28715532 28715537 MYC TRANSFAC yes 70341394
chr6 28715532 28715537 MYC TRANSFAC yes 100979067
chr6 28715562 28715577 HNF4G JASPAR yes 70341395
chr6 28715562 28715577 NR2C2 JASPAR yes 70341396
chr6 28715562 28715577 HNF4G JASPAR yes 100979068
chr6 28715562 28715577 NR2C2 JASPAR yes 100979069
chr6 28715563 28715577 NR2F1 JASPAR yes 70341397
chr6 28715563 28715577 NR2F1 JASPAR yes 100979070
chr6 28715563 28715578 HNF4A JASPAR yes 70341398
chr6 28715563 28715578 HNF4A JASPAR yes 100979071
chr6 28715593 28715605 FOXI1 JASPAR yes 70341399
chr6 28715593 28715605 FOXI1 JASPAR yes 100979072
chr6 28715596 28715600 YY1 TRANSFAC yes 70341400
chr6 28715596 28715600 YY1 TRANSFAC yes 100979073
chr6 28715625 28715631 MZF1 JASPAR yes 70341401
chr6 28715625 28715631 MZF1 JASPAR yes 100979074
chr6 28715645 28715648 MYB TRANSFAC yes 70341402
chr6 28715645 28715648 MYB TRANSFAC yes 100979075
chr6 28715661 28715672 E2F1 JASPAR yes 70341403
chr6 28715661 28715672 E2F1 JASPAR yes 100979076
chr6 28715691 28715695 NFE TRANSFAC yes 70341404
chr6 28715691 28715695 NFE TRANSFAC yes 100979077
chr6 28715692 28715708 SRF JASPAR yes 70341405
chr6 28715692 28715708 SRF JASPAR yes 100979078
chr6 28715693 28715705 SRF JASPAR yes 70341406
chr6 28715693 28715705 SRF JASPAR yes 100979079
SNP sites on vista51481[chr6:28715387-28715696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28715492 rs183233290 A G
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937158
chr6 28715509 rs114333053 C G,T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937159
chr6 28715510 rs7764909 G A,T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937160
chr6 28715516 rs116157862 C G,T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937161
chr6 28715517 rs187541429 C T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937162
chr6 28715519 rs113664522 G A
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937163
chr6 28715521 rs142646949 G A,C
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937164
chr6 28715523 rs369041602 C G
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937165
chr6 28715537 rs6909102 T C
ATF3 BDP1 EP300 GTF3C2 MYC RPC155 TBP TEAD4
8937166
chr6 28715545 rs7764775 C G,T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937167
chr6 28715548 rs190921203 C G
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937168
chr6 28715551 rs573669670 A G
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937169
chr6 28715564 rs6929372 C A,G,T
ATF3 BDP1 EP300 GTF3C2 HNF4A HNF4G NR2C2 NR2F1 RPC155 TBP TEAD4
8937170
chr6 28715566 rs1233583 G A
ATF3 BDP1 EP300 GTF3C2 HNF4A HNF4G NR2C2 NR2F1 RPC155 TBP TEAD4
8937171
chr6 28715572 rs183290826 G A
ATF3 BDP1 EP300 GTF3C2 HNF4A HNF4G NR2C2 NR2F1 RPC155 TBP TEAD4
8937172
chr6 28715583 rs114227105 C T
ATF3 BDP1 EP300 GTF3C2 RPC155 TBP TEAD4
8937173
chr6 28715604 rs1233584 G C
ATF3 BDP1 EGR1 EP300 FOXI1 GTF3C2 RPC155 TBP TEAD4
8937174
chr6 28715639 rs73391168 G T
ATF3 EGR1 EP300 GTF3C2 RPC155 TBP TEAD4
8937175
Genes possibly regulated by vista51481[chr6:28715387-28715696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista51481[chr6:28715387-28715696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results