EnhancerDB
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  3. vista51485[chr6:28822567-28822754]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51485[chr6:28822567-28822754]
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Tissue distribution of vista51485
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Transcription factor that possibly regulate vista51485[chr6:28822567-28822754]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28822581 28822595 POU1F1 JASPAR yes 70341505
chr6 28822582 28822593 FOXA1 JASPAR yes 70341506
chr6 28822582 28822594 POU3F1 JASPAR yes 70341507
chr6 28822582 28822594 POU3F2 JASPAR yes 70341508
chr6 28822582 28822595 POU2F2 JASPAR yes 70341509
chr6 28822582 28822597 FOXA1 JASPAR yes 70341510
chr6 28822583 28822592 POU3F4 JASPAR yes 70341511
chr6 28822583 28822592 POU5F1B JASPAR yes 70341512
chr6 28822583 28822594 FOXB1 JASPAR yes 70341513
chr6 28822583 28822594 FOXC1 JASPAR yes 70341514
chr6 28822583 28822595 FOXC2 JASPAR yes 70341515
chr6 28822591 28822594 MYB TRANSFAC yes 70341516
chr6 28822597 28822607 GSX2 JASPAR yes 70341517
chr6 28822598 28822606 BSX JASPAR yes 70341518
chr6 28822598 28822607 VENTX JASPAR yes 70341519
chr6 28822610 28822615 GATA2 JASPAR yes 70341520
chr6 28822616 28822628 YY1 JASPAR yes 70341521
chr6 28822621 28822633 HES5 JASPAR yes 70341522
chr6 28822621 28822633 HES7 JASPAR yes 70341523
chr6 28822622 28822632 BHLHE40 JASPAR yes 70341524
chr6 28822622 28822632 CLOCK JASPAR yes 70341525
chr6 28822622 28822632 HEY1 JASPAR yes 70341526
chr6 28822622 28822632 HEY2 JASPAR yes 70341527
chr6 28822622 28822632 MAX JASPAR yes 70341528
chr6 28822622 28822632 MNT JASPAR yes 70341529
chr6 28822624 28822629 MYC TRANSFAC yes 70341530
chr6 28822624 28822629 USF1 TRANSFAC yes 70341531
chr6 28822624 28822629 USF2 TRANSFAC yes 70341532
chr6 28822630 28822638 FOXL1 JASPAR yes 70341533
chr6 28822635 28822646 NFIL3 JASPAR yes 70341534
chr6 28822636 28822647 DMRT3 JASPAR yes 70341535
chr6 28822640 28822643 MYB TRANSFAC yes 70341536
chr6 28822644 28822660 SOX8 JASPAR yes 70341537
chr6 28822657 28822667 MAX JASPAR yes 70341538
chr6 28822705 28822709 YY1 TRANSFAC yes 70341539
chr6 28822706 28822720 E2F7 JASPAR yes 70341540
chr6 28822733 28822745 FOXI1 JASPAR yes 70341541
chr6 28822734 28822746 FOXC2 JASPAR yes 70341542
chr6 28822734 28822748 ONECUT3 JASPAR yes 70341543
chr6 28822735 28822746 FOXB1 JASPAR yes 70341544
chr6 28822735 28822746 FOXC1 JASPAR yes 70341545
chr6 28822736 28822740 YY1 TRANSFAC yes 70341546
chr6 28822736 28822751 FOXA1 JASPAR yes 70341547
chr6 28822736 28822751 MEF2A JASPAR yes 70341548
chr6 28822737 28822749 FOXI1 JASPAR yes 70341549
chr6 28822737 28822752 FOXP1 JASPAR yes 70341550
chr6 28822737 28822752 MEF2C JASPAR yes 70341551
chr6 28822738 28822750 FOXC2 JASPAR yes 70341552
chr6 28822738 28822750 MEF2A JASPAR yes 70341553
chr6 28822738 28822750 MEF2B JASPAR yes 70341554
chr6 28822738 28822750 MEF2D JASPAR yes 70341555
chr6 28822739 28822749 MEF2A JASPAR yes 70341556
chr6 28822739 28822750 FOXB1 JASPAR yes 70341557
chr6 28822739 28822750 FOXC1 JASPAR yes 70341558
chr6 28822740 28822744 YY1 TRANSFAC yes 70341559
chr6 28822746 28822750 YY1 TRANSFAC yes 70341560
SNP sites on vista51485[chr6:28822567-28822754]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28822636 rs193045328 A C
DMRT3 FOXL1 NFIL3
8938080
chr6 28822663 rs138044664 C T
MAX
8938081
chr6 28822736 rs9461482 G A
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 MEF2A ONECUT3 YY1
8938082
Genes possibly regulated by vista51485[chr6:28822567-28822754]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28870779 28891766 - TRIM27 ENSG00000204713.6 28891766 0.56 0.79 6303 30988
chr6 28911654 28912314 + C6orf100 ENSG00000204709.4 28911654 0.86 0.83 6304 11100
Expression level of Genes
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miRNAs possibly regulated by vista51485[chr6:28822567-28822754]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results