EnhancerDB
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  3. vista51487[chr6:28860175-28860528]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51487[chr6:28860175-28860528]
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Tissue distribution of vista51487
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Transcription factor that possibly regulate vista51487[chr6:28860175-28860528]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 28860169 28860175 MZF1 JASPAR yes 70341577
chr6 28860169 28860175 MZF1 JASPAR yes 100989779
chr6 28860190 28860194 YY1 TRANSFAC yes 70341578
chr6 28860190 28860194 YY1 TRANSFAC yes 100989780
chr6 28860193 28860208 FOXP1 JASPAR yes 70341579
chr6 28860193 28860208 FOXP1 JASPAR yes 100989781
chr6 28860197 28860208 ESRRB JASPAR yes 70341580
chr6 28860197 28860208 ESRRB JASPAR yes 100989782
chr6 28860206 28860217 TBX2 JASPAR yes 70341581
chr6 28860206 28860217 TBX2 JASPAR yes 100989783
chr6 28860207 28860217 TBR1 JASPAR yes 70341582
chr6 28860207 28860217 TBR1 JASPAR yes 100989784
chr6 28860208 28860219 HOXA10 JASPAR yes 70341583
chr6 28860208 28860219 HOXA10 JASPAR yes 100989785
chr6 28860208 28860222 GATA2 JASPAR yes 70341584
chr6 28860208 28860222 GATA2 JASPAR yes 100989786
chr6 28860224 28860227 MYB TRANSFAC yes 70341585
chr6 28860224 28860227 MYB TRANSFAC yes 100989787
chr6 28860238 28860253 FOXA1 JASPAR yes 70341586
chr6 28860238 28860253 FOXA1 JASPAR yes 100989788
chr6 28860240 28860252 FOXC2 JASPAR yes 70341587
chr6 28860240 28860252 FOXC2 JASPAR yes 100989789
chr6 28860241 28860252 FOXC1 JASPAR yes 70341588
chr6 28860241 28860252 FOXC1 JASPAR yes 100989790
chr6 28860242 28860253 FOXA1 JASPAR yes 70341589
chr6 28860242 28860253 FOXA1 JASPAR yes 100989791
chr6 28860251 28860267 SOX8 JASPAR yes 70341590
chr6 28860251 28860267 SOX8 JASPAR yes 100989792
chr6 28860257 28860270 HSF1 JASPAR yes 70341591
chr6 28860257 28860270 HSF4 JASPAR yes 70341592
chr6 28860257 28860270 HSF1 JASPAR yes 100989793
chr6 28860257 28860270 HSF4 JASPAR yes 100989794
chr6 28860270 28860283 DUXA JASPAR yes 70341593
chr6 28860270 28860283 DUXA JASPAR yes 100989795
chr6 28860271 28860282 DUX4 JASPAR yes 70341594
chr6 28860271 28860282 DUX4 JASPAR yes 100989796
chr6 28860273 28860278 MYB TRANSFAC yes 70341595
chr6 28860273 28860278 MYB TRANSFAC yes 100989797
chr6 28860278 28860283 MYB TRANSFAC yes 70341596
chr6 28860278 28860283 MYB TRANSFAC yes 100989798
chr6 28860282 28860298 ZNF143 JASPAR yes 70341597
chr6 28860282 28860298 ZNF143 JASPAR yes 100989799
chr6 28860283 28860288 MYB TRANSFAC yes 70341598
chr6 28860283 28860288 MYB TRANSFAC yes 100989800
chr6 28860283 28860295 PBX1 JASPAR yes 70341599
chr6 28860283 28860295 PBX1 JASPAR yes 100989801
chr6 28860315 28860326 HOXC13 JASPAR yes 70341600
chr6 28860315 28860326 HOXC13 JASPAR yes 100989802
chr6 28860331 28860342 PHOX2A JASPAR yes 70341601
chr6 28860331 28860342 PHOX2A JASPAR yes 100989803
chr6 28860335 28860345 HOXB13 JASPAR yes 70341602
chr6 28860335 28860345 HOXD13 JASPAR yes 70341603
chr6 28860335 28860345 HOXB13 JASPAR yes 100989804
chr6 28860335 28860345 HOXD13 JASPAR yes 100989805
chr6 28860343 28860359 SRF JASPAR yes 70341604
chr6 28860343 28860359 SRF JASPAR yes 100989806
chr6 28860343 28860361 SRF JASPAR yes 70341605
chr6 28860343 28860361 SRF JASPAR yes 100989807
chr6 28860346 28860358 SRF JASPAR yes 70341606
chr6 28860346 28860358 SRF JASPAR yes 100989808
chr6 28860349 28860353 YY1 TRANSFAC yes 70341607
chr6 28860349 28860353 YY1 TRANSFAC yes 100989809
chr6 28860354 28860358 ESR1 TRANSFAC yes 70341608
chr6 28860354 28860358 ESR1 TRANSFAC yes 100989810
chr6 28860371 28860375 NFE TRANSFAC yes 70341609
chr6 28860371 28860375 NFE TRANSFAC yes 100989811
chr6 28860375 28860380 MYC TRANSFAC yes 70341610
chr6 28860375 28860380 MYC TRANSFAC yes 100989812
chr6 28860376 28860393 RXRA JASPAR yes 70341611
chr6 28860376 28860393 RXRA JASPAR yes 100989813
chr6 28860391 28860394 MYB TRANSFAC yes 70341612
chr6 28860391 28860394 MYB TRANSFAC yes 100989814
chr6 28860433 28860451 SRF JASPAR yes 70341613
chr6 28860433 28860451 SRF JASPAR yes 100989815
chr6 28860434 28860438 NFE TRANSFAC yes 70341614
chr6 28860434 28860438 NFE TRANSFAC yes 100989816
chr6 28860434 28860439 GATA1 TRANSFAC yes 70341615
chr6 28860434 28860439 GATA1 TRANSFAC yes 100989817
chr6 28860434 28860440 GATA3 JASPAR yes 70341616
chr6 28860434 28860440 GATA3 JASPAR yes 100989818
chr6 28860456 28860466 MEOX1 JASPAR yes 70341617
chr6 28860456 28860466 MEOX2 JASPAR yes 70341618
chr6 28860456 28860466 POU6F1 JASPAR yes 70341619
chr6 28860456 28860466 MEOX1 JASPAR yes 100989819
chr6 28860456 28860466 MEOX2 JASPAR yes 100989820
chr6 28860456 28860466 POU6F1 JASPAR yes 100989821
chr6 28860469 28860485 SOX8 JASPAR yes 70341620
chr6 28860469 28860485 SOX8 JASPAR yes 100989822
chr6 28860479 28860488 SRY JASPAR yes 70341621
chr6 28860479 28860488 SRY JASPAR yes 100989823
chr6 28860494 28860497 MYB TRANSFAC yes 70341622
chr6 28860494 28860497 MYB TRANSFAC yes 100989824
chr6 28860494 28860503 RUNX2 JASPAR yes 70341623
chr6 28860494 28860503 RUNX2 JASPAR yes 100989825
chr6 28860494 28860504 RUNX3 JASPAR yes 70341624
chr6 28860494 28860504 RUNX3 JASPAR yes 100989826
chr6 28860494 28860505 RUNX1 JASPAR yes 70341625
chr6 28860494 28860505 RUNX1 JASPAR yes 100989827
chr6 28860523 28860526 MYB TRANSFAC yes 70341626
chr6 28860523 28860526 MYB TRANSFAC yes 100989828
SNP sites on vista51487[chr6:28860175-28860528]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 28860192 rs200741061 A AT
YY1
8938718
chr6 28860396 rs114464814 A G no 8938719
chr6 28860439 rs149760552 C G
GATA1 GATA3 SRF
8938720
chr6 28860458 rs574763668 G C
MEOX1 MEOX2 POU6F1
8938721
chr6 28860499 rs6456867 C T
RUNX1 RUNX2 RUNX3
8938722
Genes possibly regulated by vista51487[chr6:28860175-28860528]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 28870779 28891766 - TRIM27 ENSG00000204713.6 28891766 0.56 0.79 6303 68762
chr6 28911654 28912314 + C6orf100 ENSG00000204709.4 28911654 0.86 0.83 6304 48874
Expression level of Genes
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miRNAs possibly regulated by vista51487[chr6:28860175-28860528]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results