EnhancerDB
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  3. vista51498[chr6:29678266-29678438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51498[chr6:29678266-29678438]
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Tissue distribution of vista51498
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Transcription factor that possibly regulate vista51498[chr6:29678266-29678438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 29678256 29678270 TLX1 JASPAR yes 70341981
chr6 29678256 29678270 TLX1 JASPAR yes 101006072
chr6 29678261 29678276 TFAP2A JASPAR yes 70341982
chr6 29678261 29678276 TFAP2A JASPAR yes 101006073
chr6 29678263 29678278 TFAP2A JASPAR yes 70341983
chr6 29678263 29678278 TFAP2C JASPAR yes 70341984
chr6 29678263 29678278 TFAP2A JASPAR yes 101006074
chr6 29678263 29678278 TFAP2C JASPAR yes 101006075
chr6 29678264 29678276 TFAP2A JASPAR yes 70341985
chr6 29678264 29678276 TFAP2A JASPAR yes 101006076
chr6 29678269 29678286 ESR1 JASPAR yes 70341986
chr6 29678269 29678286 ESR1 JASPAR yes 101006077
chr6 29678269 29678287 ESR2 JASPAR yes 70341987
chr6 29678269 29678287 ESR2 JASPAR yes 101006078
chr6 29678270 29678290 ESR1 JASPAR yes 70341988
chr6 29678270 29678290 ESR1 JASPAR yes 101006079
chr6 29678271 29678275 LFA1 TRANSFAC yes 70341989
chr6 29678271 29678275 LFA1 TRANSFAC yes 101006080
chr6 29678291 29678309 ESR2 JASPAR yes 70341990
chr6 29678291 29678309 ESR2 JASPAR yes 101006081
chr6 29678292 29678307 ESR2 JASPAR yes 70341991
chr6 29678292 29678307 ESR2 JASPAR yes 101006082
chr6 29678316 29678322 ATF1 TRANSFAC yes 70341992
chr6 29678316 29678322 ATF1 TRANSFAC yes 101006083
chr6 29678353 29678358 ETS2 TRANSFAC yes 70341993
chr6 29678353 29678358 ETS2 TRANSFAC yes 101006084
chr6 29678368 29678375 SPIB JASPAR yes 70341994
chr6 29678368 29678375 SPIB JASPAR yes 101006085
chr6 29678387 29678401 TLX1 JASPAR yes 70341995
chr6 29678387 29678401 TLX1 JASPAR yes 101006086
chr6 29678391 29678396 SP1 TRANSFAC yes 70341996
chr6 29678391 29678396 SP1 TRANSFAC yes 101006087
chr6 29678394 29678399 SP1 TRANSFAC yes 70341997
chr6 29678394 29678399 SP1 TRANSFAC yes 101006088
chr6 29678420 29678440 RREB1 JASPAR yes 70341998
chr6 29678420 29678440 RREB1 JASPAR yes 101006089
chr6 29678425 29678435 SP1 JASPAR yes 70341999
chr6 29678425 29678435 SP1 JASPAR yes 101006090
SNP sites on vista51498[chr6:29678266-29678438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 29678324 rs116378336 C T no 8940810
chr6 29678390 rs9258131 G A
TLX1
8940811
chr6 29678404 rs111514045 C T no 8940812
Genes possibly regulated by vista51498[chr6:29678266-29678438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 29523406 29601753 - GABBR1 ENSG00000204681.6 29601753 0.81 0.78 6320 23487
chr6 29624758 29640149 + MOG ENSG00000204655.7 29624758 0.98 1.0 6322 46492
chr6 29640169 29648887 - ZFP57 ENSG00000204644.5 29648887 0.99 0.99 6323 70621
chr6 29690552 29706305 + HLA-F ENSG00000204642.9 29690552 0.89 0.91 6324 87886
Expression level of Genes
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miRNAs possibly regulated by vista51498[chr6:29678266-29678438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results