EnhancerDB
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  3. vista51505[chr6:30019374-30019509]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51505[chr6:30019374-30019509]
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Tissue distribution of vista51505
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Transcription factor that possibly regulate vista51505[chr6:30019374-30019509]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30019383 30019387 YY1 TRANSFAC yes 70342256
chr6 30019387 30019391 YY1 TRANSFAC yes 70342257
chr6 30019406 30019410 YY1 TRANSFAC yes 70342258
chr6 30019420 30019435 MEF2A JASPAR yes 70342259
chr6 30019421 30019436 MEF2C JASPAR yes 70342260
chr6 30019422 30019434 MEF2A JASPAR yes 70342261
chr6 30019424 30019428 YY1 TRANSFAC yes 70342262
chr6 30019424 30019435 CEBPA JASPAR yes 70342263
chr6 30019425 30019436 CEBPB JASPAR yes 70342264
chr6 30019429 30019440 FOXH1 JASPAR yes 70342265
chr6 30019434 30019450 SOX8 JASPAR yes 70342266
chr6 30019448 30019463 MEF2A JASPAR yes 70342267
chr6 30019450 30019460 ALX3 JASPAR yes 70342268
chr6 30019450 30019460 HOXB2 JASPAR yes 70342269
chr6 30019450 30019460 MNX1 JASPAR yes 70342270
chr6 30019450 30019462 MEF2A JASPAR yes 70342271
chr6 30019450 30019462 MEF2B JASPAR yes 70342272
chr6 30019450 30019462 MEF2D JASPAR yes 70342273
chr6 30019451 30019459 LMX1A JASPAR yes 70342274
chr6 30019451 30019459 LMX1B JASPAR yes 70342275
chr6 30019451 30019459 NKX6-1 JASPAR yes 70342276
chr6 30019451 30019459 NKX6-2 JASPAR yes 70342277
chr6 30019451 30019459 VAX1 JASPAR yes 70342278
chr6 30019451 30019459 VAX2 JASPAR yes 70342279
chr6 30019451 30019459 VSX1 JASPAR yes 70342280
chr6 30019451 30019459 VSX2 JASPAR yes 70342281
chr6 30019451 30019461 MEF2A JASPAR yes 70342282
chr6 30019474 30019478 NFE TRANSFAC yes 70342283
chr6 30019476 30019488 HNF1B JASPAR yes 70342284
chr6 30019480 30019496 SOX8 JASPAR yes 70342285
chr6 30019484 30019502 NR3C1 JASPAR yes 70342286
chr6 30019494 30019499 ETS2 TRANSFAC yes 70342287
chr6 30019500 30019504 NFE TRANSFAC yes 70342288
chr6 30019500 30019505 GATA1 TRANSFAC yes 70342289
chr6 30019500 30019506 GATA3 JASPAR yes 70342290
SNP sites on vista51505[chr6:30019374-30019509]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30019429 rs56216735 T C
CEBPA CEBPB FOXH1 MEF2A MEF2C
8945492
chr6 30019499 rs201265229 TTCTA T
ETS2 NR3C1
8945493
chr6 30019499 rs374503341 TTCTA T
ETS2 NR3C1
8945494
Genes possibly regulated by vista51505[chr6:30019374-30019509]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30026676 30032686 + ZNRD1 ENSG00000066379.10 30026676 0.64 0.91 6327 92833
chr6 30034486 30038110 + PPP1R11 ENSG00000204619.3 30034486 0.56 0.71 6328 85023
chr6 30038043 30043664 - RNF39 ENSG00000204618.4 30043664 0.91 0.95 6329 75845
chr6 30070674 30080883 - TRIM31 ENSG00000204616.6 30080883 0.98 0.98 6330 38626
chr6 30103885 30116512 + TRIM40 ENSG00000204614.4 30103885 1.0 0.94 6331 15624
Expression level of Genes
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miRNAs possibly regulated by vista51505[chr6:30019374-30019509]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results