EnhancerDB
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  3. vista51508[chr6:30175844-30176213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51508[chr6:30175844-30176213]
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Tissue distribution of vista51508
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Transcription factor that possibly regulate vista51508[chr6:30175844-30176213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30175835 30175849 GATA2 JASPAR yes 70342352
chr6 30175835 30175849 GATA2 JASPAR yes 101027388
chr6 30175839 30175847 GATA5 JASPAR yes 70342353
chr6 30175839 30175847 GATA5 JASPAR yes 101027390
chr6 30175849 30175863 POU1F1 JASPAR yes 70342354
chr6 30175849 30175863 POU1F1 JASPAR yes 101027391
chr6 30175850 30175863 POU3F3 JASPAR yes 70342355
chr6 30175850 30175863 POU3F3 JASPAR yes 101027392
chr6 30175851 30175863 POU2F1 JASPAR yes 70342356
chr6 30175851 30175863 POU2F1 JASPAR yes 101027393
chr6 30175863 30175873 NFIA JASPAR yes 70342357
chr6 30175863 30175873 NFIA JASPAR yes 101027394
chr6 30175864 30175873 NFIX JASPAR yes 70342358
chr6 30175864 30175873 NFIX JASPAR yes 101027395
chr6 30175865 30175871 NFIC JASPAR yes 70342359
chr6 30175865 30175871 NFIC JASPAR yes 101027396
chr6 30175877 30175888 CDX2 JASPAR yes 70342360
chr6 30175877 30175888 CDX2 JASPAR yes 101027397
chr6 30175878 30175889 HOXA10 JASPAR yes 70342361
chr6 30175878 30175889 HOXA10 JASPAR yes 101027398
chr6 30175879 30175888 CDX1 JASPAR yes 70342362
chr6 30175879 30175888 CDX1 JASPAR yes 101027399
chr6 30175879 30175889 HOXA13 JASPAR yes 70342363
chr6 30175879 30175889 HOXB13 JASPAR yes 70342364
chr6 30175879 30175889 HOXD13 JASPAR yes 70342365
chr6 30175879 30175889 HOXA13 JASPAR yes 101027400
chr6 30175879 30175889 HOXB13 JASPAR yes 101027401
chr6 30175879 30175889 HOXD13 JASPAR yes 101027402
chr6 30175892 30175907 FOXP1 JASPAR yes 70342366
chr6 30175892 30175907 FOXP1 JASPAR yes 101027403
chr6 30175893 30175904 FOXA1 JASPAR yes 70342367
chr6 30175893 30175904 FOXA1 JASPAR yes 101027404
chr6 30175894 30175906 FOXC2 JASPAR yes 70342368
chr6 30175894 30175906 FOXC2 JASPAR yes 101027405
chr6 30175895 30175906 FOXP2 JASPAR yes 70342369
chr6 30175895 30175906 FOXP2 JASPAR yes 101027406
chr6 30175897 30175906 SRY JASPAR yes 70342370
chr6 30175897 30175906 SRY JASPAR yes 101027407
chr6 30175899 30175919 RREB1 JASPAR yes 70342371
chr6 30175899 30175919 RREB1 JASPAR yes 101027408
chr6 30175901 30175907 SOX10 JASPAR yes 70342372
chr6 30175901 30175907 SOX10 JASPAR yes 101027409
chr6 30175919 30175924 GATA1 TRANSFAC yes 70342373
chr6 30175919 30175924 GATA1 TRANSFAC yes 101027410
chr6 30175928 30175934 SOX10 JASPAR yes 70342374
chr6 30175928 30175934 SOX10 JASPAR yes 101027411
chr6 30175946 30175959 ZBTB18 JASPAR yes 70342375
chr6 30175946 30175959 ZBTB18 JASPAR yes 101027412
chr6 30175958 30175963 ETS2 TRANSFAC yes 70342376
chr6 30175958 30175963 ETS2 TRANSFAC yes 101027413
chr6 30175958 30175968 TEAD1 JASPAR yes 70342377
chr6 30175958 30175968 TEAD4 JASPAR yes 70342378
chr6 30175958 30175968 TEAD1 JASPAR yes 101027414
chr6 30175958 30175968 TEAD4 JASPAR yes 101027415
chr6 30175959 30175967 TEAD3 JASPAR yes 70342379
chr6 30175959 30175967 TEAD3 JASPAR yes 101027416
chr6 30175979 30175988 SNAI2 JASPAR yes 70342380
chr6 30175979 30175988 SNAI2 JASPAR yes 101027417
chr6 30175980 30175985 USF2 TRANSFAC yes 70342381
chr6 30175980 30175985 USF2 TRANSFAC yes 101027418
chr6 30176000 30176012 YY1 JASPAR yes 70342382
chr6 30176000 30176012 YY1 JASPAR yes 101027419
chr6 30176006 30176017 HOXC12 JASPAR yes 70342383
chr6 30176006 30176017 HOXC12 JASPAR yes 101027420
chr6 30176050 30176069 REST JASPAR yes 70342384
chr6 30176050 30176069 REST JASPAR yes 101027421
chr6 30176069 30176083 CREB3 JASPAR yes 70342385
chr6 30176069 30176083 CREB3 JASPAR yes 101027422
chr6 30176073 30176085 CREB1 JASPAR yes 70342386
chr6 30176073 30176085 CREB1 JASPAR yes 101027423
chr6 30176074 30176079 ATF1 TRANSFAC yes 70342387
chr6 30176074 30176079 ATF1 TRANSFAC yes 101027424
chr6 30176092 30176108 RFX4 JASPAR yes 70342388
chr6 30176092 30176108 RFX4 JASPAR yes 101027425
chr6 30176094 30176099 GATA2 JASPAR yes 70342389
chr6 30176094 30176099 GATA2 JASPAR yes 101027426
chr6 30176153 30176165 YY1 JASPAR yes 70342390
chr6 30176153 30176165 YY1 JASPAR yes 101027427
chr6 30176195 30176209 SPI1 JASPAR yes 70342391
chr6 30176195 30176209 SPIC JASPAR yes 70342392
chr6 30176195 30176209 SPI1 JASPAR yes 101027428
chr6 30176195 30176209 SPIC JASPAR yes 101027429
chr6 30176203 30176218 FOXP1 JASPAR yes 70342393
chr6 30176203 30176218 FOXP1 JASPAR yes 101027430
chr6 30176206 30176220 IRF7 JASPAR yes 70342394
chr6 30176206 30176220 IRF7 JASPAR yes 101027431
chr6 30176208 30176220 MEF2A JASPAR yes 70342395
chr6 30176208 30176220 MEF2D JASPAR yes 70342396
chr6 30176208 30176220 MEF2A JASPAR yes 101027432
chr6 30176208 30176220 MEF2D JASPAR yes 101027433
SNP sites on vista51508[chr6:30175844-30176213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30175847 rs3132672 A C
GATA2 GATA5
8946156
chr6 30176069 rs60172155 G C
CREB3 REST
8946157
chr6 30176077 rs143975626 G A
ATF1 CREB1 CREB3
8946158
chr6 30176105 rs186804520 T G
RFX4
8946159
chr6 30176122 rs10947058 C T no 8946160
Genes possibly regulated by vista51508[chr6:30175844-30176213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30070674 30080883 - TRIM31 ENSG00000204616.6 30080883 0.98 0.98 6330 5039
chr6 30103885 30116512 + TRIM40 ENSG00000204614.4 30103885 1.0 0.94 6331 28041
chr6 30119722 30128711 - TRIM10 ENSG00000204613.6 30128711 0.89 0.98 6332 52867
chr6 30130993 30140473 + TRIM15 ENSG00000204610.8 30130993 0.93 0.99 6333 55149
chr6 30152232 30181204 - TRIM26 ENSG00000234127.4 30181204 0.59 0.75 6334 95009
Expression level of Genes
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miRNAs possibly regulated by vista51508[chr6:30175844-30176213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results