EnhancerDB
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  3. vista51518[chr6:30477053-30477329]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51518[chr6:30477053-30477329]
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Tissue distribution of vista51518
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Transcription factor that possibly regulate vista51518[chr6:30477053-30477329]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30476933 30477311 RUNX3 UCSC Txn Factor no Conserved 108539474
chr6 30476950 30477301 NFIC UCSC Txn Factor no Conserved 108539475
chr6 30477039 30477055 E2F2 JASPAR yes 70342883
chr6 30477039 30477055 E2F2 JASPAR yes 101036401
chr6 30477087 30477092 GATA1 TRANSFAC yes 70342884
chr6 30477087 30477092 GATA1 TRANSFAC yes 101036402
chr6 30477097 30477105 FEV JASPAR yes 70342885
chr6 30477097 30477105 FEV JASPAR yes 101036403
chr6 30477111 30477123 GLI2 JASPAR yes 70342886
chr6 30477111 30477123 GLI2 JASPAR yes 101036404
chr6 30477112 30477122 RUNX3 JASPAR yes 70342887
chr6 30477112 30477122 RUNX3 JASPAR yes 101036405
chr6 30477112 30477131 CTCF JASPAR yes 70342888
chr6 30477112 30477131 CTCF JASPAR yes 101036406
chr6 30477117 30477123 SOX10 JASPAR yes 70342889
chr6 30477117 30477123 SOX10 JASPAR yes 101036407
chr6 30477117 30477131 SPIC JASPAR yes 70342890
chr6 30477117 30477131 SPIC JASPAR yes 101036408
chr6 30477124 30477130 PEA3 TRANSFAC yes 70342891
chr6 30477124 30477130 PEA3 TRANSFAC yes 101036409
chr6 30477127 30477141 SPI1 JASPAR yes 70342892
chr6 30477127 30477141 SPI1 JASPAR yes 101036410
chr6 30477128 30477141 ELF1 JASPAR yes 70342893
chr6 30477128 30477141 ELF1 JASPAR yes 101036411
chr6 30477129 30477141 EHF JASPAR yes 70342894
chr6 30477129 30477141 ELF1 JASPAR yes 70342895
chr6 30477129 30477141 ELF4 JASPAR yes 70342896
chr6 30477129 30477141 EHF JASPAR yes 101036412
chr6 30477129 30477141 ELF1 JASPAR yes 101036413
chr6 30477129 30477141 ELF4 JASPAR yes 101036414
chr6 30477129 30477142 ELF3 JASPAR yes 70342897
chr6 30477129 30477142 ELF3 JASPAR yes 101036415
chr6 30477130 30477141 ELF5 JASPAR yes 70342898
chr6 30477130 30477141 SPDEF JASPAR yes 70342899
chr6 30477130 30477141 ELF5 JASPAR yes 101036416
chr6 30477130 30477141 SPDEF JASPAR yes 101036417
chr6 30477131 30477138 ETS1 TRANSFAC yes 70342900
chr6 30477131 30477138 ETS1 TRANSFAC yes 101036418
chr6 30477131 30477141 ETV6 JASPAR yes 70342901
chr6 30477131 30477141 ETV6 JASPAR yes 101036419
chr6 30477131 30477142 ELK4 JASPAR yes 70342902
chr6 30477131 30477142 FLI1 JASPAR yes 70342903
chr6 30477131 30477142 ELK4 JASPAR yes 101036420
chr6 30477131 30477142 FLI1 JASPAR yes 101036421
chr6 30477132 30477140 EHF JASPAR yes 70342904
chr6 30477132 30477140 FEV JASPAR yes 70342905
chr6 30477132 30477140 EHF JASPAR yes 101036422
chr6 30477132 30477140 FEV JASPAR yes 101036423
chr6 30477133 30477140 SPI1 JASPAR yes 70342906
chr6 30477133 30477140 SPI1 JASPAR yes 101036424
chr6 30477137 30477148 RUNX1 JASPAR yes 70342907
chr6 30477137 30477148 RUNX1 JASPAR yes 101036425
chr6 30477151 30477163 ELF4 JASPAR yes 70342908
chr6 30477151 30477163 ELF4 JASPAR yes 101036426
chr6 30477152 30477163 ELF5 JASPAR yes 70342909
chr6 30477152 30477163 ETV2 JASPAR yes 70342910
chr6 30477152 30477163 ELF5 JASPAR yes 101036427
chr6 30477152 30477163 ETV2 JASPAR yes 101036428
chr6 30477153 30477163 ELK1 JASPAR yes 70342911
chr6 30477153 30477163 ELK3 JASPAR yes 70342912
chr6 30477153 30477163 ERG JASPAR yes 70342913
chr6 30477153 30477163 ETS1 JASPAR yes 70342914
chr6 30477153 30477163 ETV1 JASPAR yes 70342915
chr6 30477153 30477163 ETV4 JASPAR yes 70342916
chr6 30477153 30477163 ETV5 JASPAR yes 70342917
chr6 30477153 30477163 ETV6 JASPAR yes 70342918
chr6 30477153 30477163 FEV JASPAR yes 70342919
chr6 30477153 30477163 FLI1 JASPAR yes 70342920
chr6 30477153 30477163 GABPA JASPAR yes 70342921
chr6 30477153 30477163 ELK1 JASPAR yes 101036429
chr6 30477153 30477163 ELK3 JASPAR yes 101036430
chr6 30477153 30477163 ERG JASPAR yes 101036431
chr6 30477153 30477163 ETS1 JASPAR yes 101036432
chr6 30477153 30477163 ETV1 JASPAR yes 101036433
chr6 30477153 30477163 ETV4 JASPAR yes 101036434
chr6 30477153 30477163 ETV5 JASPAR yes 101036435
chr6 30477153 30477163 ETV6 JASPAR yes 101036436
chr6 30477153 30477163 FEV JASPAR yes 101036437
chr6 30477153 30477163 FLI1 JASPAR yes 101036438
chr6 30477153 30477163 GABPA JASPAR yes 101036439
chr6 30477153 30477164 ELK4 JASPAR yes 70342922
chr6 30477153 30477164 ELK4 JASPAR yes 101036440
chr6 30477154 30477164 HINFP JASPAR yes 70342923
chr6 30477154 30477164 HINFP JASPAR yes 101036441
chr6 30477155 30477161 ETS1 JASPAR yes 70342924
chr6 30477155 30477161 SPI1 JASPAR yes 70342925
chr6 30477155 30477161 ETS1 JASPAR yes 101036442
chr6 30477155 30477161 SPI1 JASPAR yes 101036443
chr6 30477155 30477173 IRF2 JASPAR yes 70342926
chr6 30477155 30477173 IRF2 JASPAR yes 101036444
chr6 30477162 30477177 FOXP1 JASPAR yes 70342927
chr6 30477162 30477177 FOXP1 JASPAR yes 101036445
chr6 30477164 30477179 MEF2C JASPAR yes 70342928
chr6 30477164 30477179 MEF2C JASPAR yes 101036446
chr6 30477164 30477185 IRF1 JASPAR yes 70342929
chr6 30477164 30477185 IRF1 JASPAR yes 101036447
chr6 30477165 30477180 MEF2A JASPAR yes 70342930
chr6 30477165 30477180 MEF2A JASPAR yes 101036448
chr6 30477168 30477174 TBP TRANSFAC yes 70342931
chr6 30477168 30477174 TBP TRANSFAC yes 101036449
chr6 30477170 30477191 IRF1 JASPAR yes 70342932
chr6 30477170 30477191 IRF1 JASPAR yes 101036450
chr6 30477174 30477189 PRDM1 JASPAR yes 70342933
chr6 30477174 30477189 PRDM1 JASPAR yes 101036451
chr6 30477196 30477211 MEF2C JASPAR yes 70342934
chr6 30477196 30477211 MEF2C JASPAR yes 101036452
chr6 30477197 30477212 MEF2A JASPAR yes 70342935
chr6 30477197 30477212 MEF2A JASPAR yes 101036453
chr6 30477205 30477212 NKX3-1 JASPAR yes 70342936
chr6 30477205 30477212 NKX3-1 JASPAR yes 101036454
chr6 30477210 30477213 MYB TRANSFAC yes 70342937
chr6 30477210 30477213 MYB TRANSFAC yes 101036455
chr6 30477235 30477242 NKX3-1 JASPAR yes 70342938
chr6 30477235 30477242 NKX3-1 JASPAR yes 101036456
chr6 30477274 30477280 TCF4 TRANSFAC yes 70342939
chr6 30477274 30477280 TCF4 TRANSFAC yes 101036457
chr6 30477276 30477289 HSF4 JASPAR yes 70342940
chr6 30477276 30477289 HSF4 JASPAR yes 101036458
chr6 30477289 30477300 NFKB1 JASPAR yes 70342941
chr6 30477289 30477300 NFKB1 JASPAR yes 101036459
chr6 30477290 30477311 ZNF263 JASPAR yes 70342942
chr6 30477290 30477311 ZNF263 JASPAR yes 101036460
chr6 30477295 30477316 ZNF263 JASPAR yes 70342943
chr6 30477295 30477316 ZNF263 JASPAR yes 101036461
chr6 30477296 30477317 ZNF263 JASPAR yes 70342944
chr6 30477296 30477317 ZNF263 JASPAR yes 101036462
chr6 30477301 30477311 SP1 JASPAR yes 70342945
chr6 30477301 30477311 SP1 JASPAR yes 101036463
chr6 30477305 30477311 MZF1 JASPAR yes 70342946
chr6 30477305 30477311 MZF1 JASPAR yes 101036464
chr6 30477311 30477330 PAX5 JASPAR yes 70342947
chr6 30477311 30477330 PAX5 JASPAR yes 101036465
chr6 30477321 30477331 LHX6 JASPAR yes 70342948
chr6 30477321 30477331 LHX6 JASPAR yes 101036466
chr6 30477327 30477342 TFAP2A JASPAR yes 70342949
chr6 30477327 30477342 TFAP2C JASPAR yes 70342950
chr6 30477327 30477342 TFAP2A JASPAR yes 101036467
chr6 30477327 30477342 TFAP2C JASPAR yes 101036468
SNP sites on vista51518[chr6:30477053-30477329]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30477235 rs996589 G A
NFIC NKX3-1 RUNX3
8947343
chr6 30477247 rs6941462 C T
NFIC RUNX3
8947344
chr6 30477256 rs996588 G A
NFIC RUNX3
8947345
chr6 30477276 rs2844718 T C
HSF4 NFIC RUNX3 TCF4
8947346
Genes possibly regulated by vista51518[chr6:30477053-30477329]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30457244 30461982 + HLA-E ENSG00000204592.5 30457244 0.83 0.89 6338 80191
chr6 30509154 30524951 - GNL1 ENSG00000204590.8 30524951 0.74 0.85 6339 52378
chr6 30524663 30531500 + PRR3 ENSG00000204576.7 30524663 0.73 0.81 6340 52666
chr6 30539153 30564956 + ABCF1 ENSG00000204574.8 30539153 0.54 0.82 6341 38176
Expression level of Genes
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miRNAs possibly regulated by vista51518[chr6:30477053-30477329]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results