EnhancerDB
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  3. vista5152[chr1:220359525-220359939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5152[chr1:220359525-220359939]
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Tissue distribution of vista5152
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Transcription factor that possibly regulate vista5152[chr1:220359525-220359939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 220359546 220359567 ZNF263 JASPAR yes 118460866
chr1 220359549 220359570 ZNF263 JASPAR yes 118460867
chr1 220359552 220359573 ZNF263 JASPAR yes 118460868
chr1 220359553 220359574 ZNF263 JASPAR yes 118460869
chr1 220359555 220359576 ZNF263 JASPAR yes 118460870
chr1 220359560 220359581 ZNF263 JASPAR yes 118460871
chr1 220359561 220359572 E2F6 JASPAR yes 118460872
chr1 220359566 220359586 RREB1 JASPAR yes 118460873
chr1 220359570 220359576 MZF1 JASPAR yes 118460874
chr1 220359571 220359581 SP1 JASPAR yes 118460875
chr1 220359573 220359583 ZNF740 JASPAR yes 118460876
chr1 220359574 220359584 GCM2 JASPAR yes 118460877
chr1 220359586 220359590 YY1 TRANSFAC yes 118460878
chr1 220359591 220359600 NF-GMa TRANSFAC yes 118460879
chr1 220359602 220359605 MYB TRANSFAC yes 118460880
chr1 220359642 220359646 NFE TRANSFAC yes 118460881
chr1 220359647 220359662 HNF4G JASPAR yes 118460882
chr1 220359648 220359662 NR2F1 JASPAR yes 118460883
chr1 220359648 220359662 RXRB JASPAR yes 118460884
chr1 220359648 220359662 RXRG JASPAR yes 118460885
chr1 220359652 220359662 RORA JASPAR yes 118460886
chr1 220359653 220359664 ESRRA JASPAR yes 118460887
chr1 220359653 220359664 ESRRB JASPAR yes 118460888
chr1 220359653 220359666 NR2F1 JASPAR yes 118460889
chr1 220359654 220359672 NR3C1 JASPAR yes 118460890
chr1 220359655 220359672 ESR1 JASPAR yes 118460891
chr1 220359657 220359661 ESR1 TRANSFAC yes 118460892
chr1 220359662 220359666 YY1 TRANSFAC yes 118460893
chr1 220359666 220359671 GATA2 JASPAR yes 118460894
chr1 220359666 220359681 LEF1 JASPAR yes 118460895
chr1 220359667 220359681 TCF7L2 JASPAR yes 118460896
chr1 220359674 220359688 POU1F1 JASPAR yes 118460897
chr1 220359675 220359688 POU3F3 JASPAR yes 118460898
chr1 220359684 220359688 YY1 TRANSFAC yes 118460899
chr1 220359697 220359707 ALX3 JASPAR yes 118460900
chr1 220359697 220359707 GSX1 JASPAR yes 118460901
chr1 220359697 220359707 GSX2 JASPAR yes 118460902
chr1 220359697 220359707 LHX6 JASPAR yes 118460903
chr1 220359697 220359707 MIXL1 JASPAR yes 118460904
chr1 220359697 220359707 MNX1 JASPAR yes 118460905
chr1 220359697 220359707 NOTO JASPAR yes 118460906
chr1 220359697 220359707 POU6F1 JASPAR yes 118460907
chr1 220359697 220359707 RAX JASPAR yes 118460908
chr1 220359698 220359706 ISX JASPAR yes 118460909
chr1 220359698 220359706 LMX1A JASPAR yes 118460910
chr1 220359698 220359706 LMX1B JASPAR yes 118460911
chr1 220359698 220359706 NKX6-1 JASPAR yes 118460912
chr1 220359698 220359706 NKX6-2 JASPAR yes 118460913
chr1 220359698 220359706 PRRX1 JASPAR yes 118460914
chr1 220359698 220359706 RAX2 JASPAR yes 118460915
chr1 220359698 220359706 SHOX JASPAR yes 118460916
chr1 220359698 220359706 UNCX JASPAR yes 118460917
chr1 220359698 220359706 VAX1 JASPAR yes 118460918
chr1 220359699 220359709 PAX7 JASPAR yes 118460919
chr1 220359701 220359711 GSX1 JASPAR yes 118460920
chr1 220359702 220359710 NKX6-1 JASPAR yes 118460921
chr1 220359702 220359710 NKX6-2 JASPAR yes 118460922
chr1 220359702 220359712 POU6F2 JASPAR yes 118460923
chr1 220359703 220359714 PHOX2A JASPAR yes 118460924
chr1 220359703 220359714 PROP1 JASPAR yes 118460925
chr1 220359710 220359724 RORA JASPAR yes 118460926
chr1 220359715 220359730 LEF1 JASPAR yes 118460927
chr1 220359718 220359731 SCRT2 JASPAR yes 118460928
chr1 220359743 220359748 GATA2 JASPAR yes 118460929
chr1 220359748 220359760 FOXI1 JASPAR yes 118460930
chr1 220359753 220359770 ZNF410 JASPAR yes 118460931
chr1 220359755 220359760 GATA2 JASPAR yes 118460932
chr1 220359765 220359768 MYB TRANSFAC yes 118460933
chr1 220359773 220359776 MYB TRANSFAC yes 118460934
chr1 220359781 220359793 FOXI1 JASPAR yes 118460935
chr1 220359791 220359812 ZNF263 JASPAR yes 118460936
chr1 220359796 220359802 HiNF-A TRANSFAC yes 118460937
chr1 220359820 220359834 RORA JASPAR yes 118460938
chr1 220359828 220359832 ESR1 TRANSFAC yes 118460939
chr1 220359837 220359841 TEAD2 TRANSFAC yes 118460940
chr1 220359838 220359848 POU6F2 JASPAR yes 118460941
chr1 220359847 220359850 MYB TRANSFAC yes 118460942
chr1 220359851 220359863 EHF JASPAR yes 118460943
chr1 220359851 220359864 ELF3 JASPAR yes 118460944
chr1 220359852 220359863 ELF5 JASPAR yes 118460945
chr1 220359856 220359865 SRY JASPAR yes 118460946
chr1 220359857 220359878 IRF1 JASPAR yes 118460947
chr1 220359858 220359869 CDX2 JASPAR yes 118460948
chr1 220359858 220359873 FOXP1 JASPAR yes 118460949
chr1 220359860 220359870 HOXA13 JASPAR yes 118460950
chr1 220359861 220359876 PRDM1 JASPAR yes 118460951
chr1 220359861 220359879 IRF2 JASPAR yes 118460952
chr1 220359885 220359906 REST JASPAR yes 118460953
chr1 220359886 220359905 REST JASPAR yes 118460954
chr1 220359905 220359908 MYB TRANSFAC yes 118460955
SNP sites on vista5152[chr1:220359525-220359939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 220359743 rs75869688 G T
GATA2
958817
chr1 220359745 rs74785064 G A
GATA2
958818
chr1 220359797 rs148093936 A G
HiNF-A ZNF263
958819
chr1 220359812 rs142837923 G A
ZNF263
958820
chr1 220359893 rs146103090 C G
REST
958821
chr1 220359935 rs187699818 C T no 958822
Genes possibly regulated by vista5152[chr1:220359525-220359939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 220230824 220263804 - BPNT1 ENSG00000162813.13 220263804 0.71 0.99 1854 4279
chr1 220267444 220321380 + IARS2 ENSG00000067704.8 220267444 0.58 0.99 1855 7919
chr1 220321635 220445796 - RAB3GAP2 ENSG00000118873.11 220445796 0.68 0.99 1856 14143
Expression level of Genes
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miRNAs possibly regulated by vista5152[chr1:220359525-220359939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results