EnhancerDB
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  3. vista51520[chr6:30497378-30497566]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51520[chr6:30497378-30497566]
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Tissue distribution of vista51520
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Transcription factor that possibly regulate vista51520[chr6:30497378-30497566]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30497374 30497384 CEBPB JASPAR yes 70343085
chr6 30497374 30497384 CEBPD JASPAR yes 70343086
chr6 30497374 30497384 CEBPE JASPAR yes 70343087
chr6 30497374 30497384 CEBPG JASPAR yes 70343088
chr6 30497374 30497384 CEBPB JASPAR yes 101039251
chr6 30497374 30497384 CEBPD JASPAR yes 101039252
chr6 30497374 30497384 CEBPE JASPAR yes 101039253
chr6 30497374 30497384 CEBPG JASPAR yes 101039254
chr6 30497377 30497384 E2F1 TRANSFAC yes 70343089
chr6 30497377 30497384 E2F1 TRANSFAC yes 101039255
chr6 30497397 30497401 LFA1 TRANSFAC yes 70343090
chr6 30497397 30497401 LFA1 TRANSFAC yes 101039256
chr6 30497399 30497420 IRF1 JASPAR yes 70343091
chr6 30497399 30497420 IRF1 JASPAR yes 101039257
chr6 30497401 30497416 IRF9 JASPAR yes 70343092
chr6 30497401 30497416 IRF9 JASPAR yes 101039258
chr6 30497418 30497433 MEF2C JASPAR yes 70343093
chr6 30497418 30497433 MEF2C JASPAR yes 101039259
chr6 30497425 30497440 FOXP1 JASPAR yes 70343094
chr6 30497425 30497440 FOXP1 JASPAR yes 101039260
chr6 30497425 30497446 IRF1 JASPAR yes 70343095
chr6 30497425 30497446 IRF1 JASPAR yes 101039261
chr6 30497426 30497441 FOXP1 JASPAR yes 70343096
chr6 30497426 30497441 FOXP1 JASPAR yes 101039262
chr6 30497427 30497448 ZNF263 JASPAR yes 70343097
chr6 30497427 30497448 ZNF263 JASPAR yes 101039263
chr6 30497428 30497449 IRF1 JASPAR yes 70343098
chr6 30497428 30497449 IRF1 JASPAR yes 101039264
chr6 30497431 30497452 IRF1 JASPAR yes 70343099
chr6 30497431 30497452 IRF1 JASPAR yes 101039265
chr6 30497432 30497446 SPI1 JASPAR yes 70343100
chr6 30497432 30497446 SPI1 JASPAR yes 101039266
chr6 30497435 30497449 SPI1 JASPAR yes 70343101
chr6 30497435 30497449 SPI1 JASPAR yes 101039267
chr6 30497438 30497452 SPI1 JASPAR yes 70343102
chr6 30497438 30497452 SPI1 JASPAR yes 101039268
chr6 30497454 30497474 TP63 JASPAR yes 70343103
chr6 30497454 30497474 TP63 JASPAR yes 101039269
chr6 30497457 30497475 MAFF JASPAR yes 70343104
chr6 30497457 30497475 MAFF JASPAR yes 101039270
chr6 30497473 30497483 NFATC3 JASPAR yes 70343105
chr6 30497473 30497483 NFATC3 JASPAR yes 101039271
chr6 30497474 30497481 NFATC2 JASPAR yes 70343106
chr6 30497474 30497481 NFATC2 JASPAR yes 101039272
chr6 30497493 30497503 TBX21 JASPAR yes 70343107
chr6 30497493 30497503 TBX21 JASPAR yes 101039273
chr6 30497493 30497504 TBX20 JASPAR yes 70343108
chr6 30497493 30497504 TBX2 JASPAR yes 70343109
chr6 30497493 30497504 TBX20 JASPAR yes 101039274
chr6 30497493 30497504 TBX2 JASPAR yes 101039275
chr6 30497493 30497506 EOMES JASPAR yes 70343110
chr6 30497493 30497506 EOMES JASPAR yes 101039276
chr6 30497494 30497502 MGA JASPAR yes 70343111
chr6 30497494 30497502 TBX15 JASPAR yes 70343112
chr6 30497494 30497502 TBX1 JASPAR yes 70343113
chr6 30497494 30497502 TBX4 JASPAR yes 70343114
chr6 30497494 30497502 TBX5 JASPAR yes 70343115
chr6 30497494 30497502 MGA JASPAR yes 101039277
chr6 30497494 30497502 TBX15 JASPAR yes 101039278
chr6 30497494 30497502 TBX1 JASPAR yes 101039279
chr6 30497494 30497502 TBX4 JASPAR yes 101039280
chr6 30497494 30497502 TBX5 JASPAR yes 101039281
chr6 30497494 30497504 TBR1 JASPAR yes 70343116
chr6 30497494 30497504 TBR1 JASPAR yes 101039282
chr6 30497521 30497528 SPIB JASPAR yes 70343117
chr6 30497521 30497528 SPIB JASPAR yes 101039283
chr6 30497549 30497558 HIC2 JASPAR yes 70343118
chr6 30497549 30497558 HIC2 JASPAR yes 101039284
SNP sites on vista51520[chr6:30497378-30497566]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30497379 rs186587168 C A,T
CEBPB CEBPD CEBPE CEBPG E2F1
8947566
chr6 30497419 rs6913164 G A
IRF1 MEF2C
8947567
chr6 30497438 rs138776021 AAAG A
FOXP1 IRF1 SPI1 ZNF263
8947568
chr6 30497438 rs60346806 AAAG A
FOXP1 IRF1 SPI1 ZNF263
8947569
chr6 30497438 rs761111594 AAAG A
FOXP1 IRF1 SPI1 ZNF263
8947570
chr6 30497490 rs2524226 A G no 8947571
Genes possibly regulated by vista51520[chr6:30497378-30497566]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30457244 30461982 + HLA-E ENSG00000204592.5 30457244 0.83 0.89 6338 59866
chr6 30509154 30524951 - GNL1 ENSG00000204590.8 30524951 0.74 0.85 6339 72615
chr6 30524663 30531500 + PRR3 ENSG00000204576.7 30524663 0.73 0.81 6340 72903
chr6 30539153 30564956 + ABCF1 ENSG00000204574.8 30539153 0.54 0.82 6341 58413
chr6 30568177 30586389 - PPP1R10 ENSG00000204569.5 30586389 0.74 0.74 6342 11177
chr6 30585486 30594172 + MRPS18B ENSG00000204568.7 30585486 0.61 0.79 6343 12080
chr6 30594619 30614600 + ATAT1 ENSG00000137343.13 30594619 0.82 0.92 6344 2947
Expression level of Genes
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miRNAs possibly regulated by vista51520[chr6:30497378-30497566]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results