EnhancerDB
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  3. vista51523[chr6:30604064-30604457]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51523[chr6:30604064-30604457]
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Tissue distribution of vista51523
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Transcription factor that possibly regulate vista51523[chr6:30604064-30604457]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30604088 30604099 FOSL2 JASPAR yes 70343286
chr6 30604090 30604103 SMAD2 JASPAR yes 70343287
chr6 30604093 30604103 TBR1 JASPAR yes 70343288
chr6 30604094 30604104 TBX21 JASPAR yes 70343289
chr6 30604095 30604103 MGA JASPAR yes 70343290
chr6 30604095 30604103 TBX15 JASPAR yes 70343291
chr6 30604095 30604103 TBX1 JASPAR yes 70343292
chr6 30604095 30604103 TBX4 JASPAR yes 70343293
chr6 30604095 30604103 TBX5 JASPAR yes 70343294
chr6 30604095 30604104 ZEB1 JASPAR yes 70343295
chr6 30604095 30604107 PKNOX1 JASPAR yes 70343296
chr6 30604095 30604107 TGIF1 JASPAR yes 70343297
chr6 30604095 30604108 ZBTB18 JASPAR yes 70343298
chr6 30604096 30604106 FIGLA JASPAR yes 70343299
chr6 30604096 30604106 ID4 JASPAR yes 70343300
chr6 30604096 30604106 TCF3 JASPAR yes 70343301
chr6 30604096 30604106 TCF4 JASPAR yes 70343302
chr6 30604097 30604106 SNAI2 JASPAR yes 70343303
chr6 30604098 30604103 USF2 TRANSFAC yes 70343304
chr6 30604104 30604125 LUN1 TRANSFAC yes 70343305
chr6 30604132 30604137 SP1 TRANSFAC yes 70343306
chr6 30604140 30604150 RORA JASPAR yes 70343307
chr6 30604141 30604152 ESRRA JASPAR yes 70343308
chr6 30604141 30604152 ESRRB JASPAR yes 70343309
chr6 30604141 30604154 NR2F1 JASPAR yes 70343310
chr6 30604143 30604151 NR4A2 JASPAR yes 70343311
chr6 30604145 30604149 ESR1 TRANSFAC yes 70343312
chr6 30604171 30604174 MYB TRANSFAC yes 70343313
chr6 30604176 30604189 NFKB2 JASPAR yes 70343314
chr6 30604192 30604207 MEF2C JASPAR yes 70343315
chr6 30604193 30604208 MEF2A JASPAR yes 70343316
chr6 30604194 30604206 MEF2A JASPAR yes 70343317
chr6 30604194 30604206 MEF2B JASPAR yes 70343318
chr6 30604194 30604206 MEF2D JASPAR yes 70343319
chr6 30604218 30604228 SP1 JASPAR yes 70343320
chr6 30604245 30604263 NFYA JASPAR yes 70343321
chr6 30604248 30604258 EVX1 JASPAR yes 70343322
chr6 30604248 30604258 EVX2 JASPAR yes 70343323
chr6 30604256 30604277 ZNF263 JASPAR yes 70343324
chr6 30604274 30604284 SREBF2 JASPAR yes 70343325
chr6 30604288 30604298 SP1 JASPAR yes 70343326
chr6 30604290 30604295 SP1 TRANSFAC yes 70343327
chr6 30604335 30604354 PAX5 JASPAR yes 70343328
chr6 30604355 30604359 NFE TRANSFAC yes 70343329
chr6 30604362 30604374 FOXC2 JASPAR yes 70343330
chr6 30604364 30604378 ONECUT2 JASPAR yes 70343331
chr6 30604364 30604378 ONECUT3 JASPAR yes 70343332
chr6 30604364 30604379 FOXP1 JASPAR yes 70343333
chr6 30604365 30604380 FOXA1 JASPAR yes 70343334
chr6 30604366 30604377 FOXB1 JASPAR yes 70343335
chr6 30604366 30604377 FOXC1 JASPAR yes 70343336
chr6 30604366 30604378 FOXC2 JASPAR yes 70343337
chr6 30604367 30604379 FOXI1 JASPAR yes 70343338
chr6 30604368 30604382 ONECUT2 JASPAR yes 70343339
chr6 30604368 30604382 ONECUT3 JASPAR yes 70343340
chr6 30604368 30604383 FOXP1 JASPAR yes 70343341
chr6 30604368 30604383 HNF1A JASPAR yes 70343342
chr6 30604369 30604383 POU4F1 JASPAR yes 70343343
chr6 30604369 30604384 FOXA1 JASPAR yes 70343344
chr6 30604369 30604385 POU4F2 JASPAR yes 70343345
chr6 30604369 30604385 POU4F3 JASPAR yes 70343346
chr6 30604370 30604381 FOXB1 JASPAR yes 70343347
chr6 30604370 30604381 FOXC1 JASPAR yes 70343348
chr6 30604370 30604381 PROP1 JASPAR yes 70343349
chr6 30604370 30604382 FOXC2 JASPAR yes 70343350
chr6 30604371 30604383 FOXI1 JASPAR yes 70343351
chr6 30604372 30604386 ONECUT2 JASPAR yes 70343352
chr6 30604372 30604386 ONECUT3 JASPAR yes 70343353
chr6 30604372 30604387 FOXP1 JASPAR yes 70343354
chr6 30604372 30604387 HNF1A JASPAR yes 70343355
chr6 30604373 30604387 POU4F1 JASPAR yes 70343356
chr6 30604373 30604388 FOXA1 JASPAR yes 70343357
chr6 30604373 30604389 POU4F3 JASPAR yes 70343358
chr6 30604374 30604385 FOXB1 JASPAR yes 70343359
chr6 30604374 30604385 FOXC1 JASPAR yes 70343360
chr6 30604374 30604385 PROP1 JASPAR yes 70343361
chr6 30604374 30604386 FOXC2 JASPAR yes 70343362
chr6 30604375 30604387 FOXI1 JASPAR yes 70343363
chr6 30604378 30604393 MEF2C JASPAR yes 70343364
chr6 30604379 30604394 MEF2A JASPAR yes 70343365
chr6 30604380 30604392 FOXC2 JASPAR yes 70343366
chr6 30604380 30604392 MEF2A JASPAR yes 70343367
chr6 30604380 30604392 MEF2B JASPAR yes 70343368
chr6 30604380 30604392 MEF2D JASPAR yes 70343369
chr6 30604381 30604391 MEF2A JASPAR yes 70343370
chr6 30604416 30604431 RUNX2 JASPAR yes 70343371
chr6 30604434 30604443 HIC2 JASPAR yes 70343372
chr6 30604436 30604447 NRF1 JASPAR yes 70343373
chr6 30604437 30604441 LFA1 TRANSFAC yes 70343374
chr6 30604437 30604457 RREB1 JASPAR yes 70343375
chr6 30604439 30604449 MAX JASPAR yes 70343376
SNP sites on vista51523[chr6:30604064-30604457]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30604178 rs60447066 G A
NFKB2
8947856
chr6 30604205 rs546833911 C CA
MEF2A MEF2B MEF2C MEF2D
8947857
chr6 30604324 rs531162635 C G no 8947858
chr6 30604371 rs190651499 T A
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1
8947859
chr6 30604427 rs142151538 G C
RUNX2
8947860
Genes possibly regulated by vista51523[chr6:30604064-30604457]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30509154 30524951 - GNL1 ENSG00000204590.8 30524951 0.74 0.85 6339 20887
chr6 30524663 30531500 + PRR3 ENSG00000204576.7 30524663 0.73 0.81 6340 20599
chr6 30539153 30564956 + ABCF1 ENSG00000204574.8 30539153 0.54 0.82 6341 35089
chr6 30568177 30586389 - PPP1R10 ENSG00000204569.5 30586389 0.74 0.74 6342 82325
chr6 30585486 30594172 + MRPS18B ENSG00000204568.7 30585486 0.61 0.79 6343 81422
chr6 30594619 30614600 + ATAT1 ENSG00000137343.13 30594619 0.82 0.92 6344 90555
chr6 30614816 30620987 + C6orf136 ENSG00000204564.7 30614816 0.68 0.75 6345 89641
chr6 30620896 30640814 - DHX16 ENSG00000204560.5 30640814 0.59 0.74 6346 63643
chr6 30644166 30655672 - PPP1R18 ENSG00000146112.7 30655672 0.75 0.78 6347 48785
chr6 30655824 30659197 - NRM ENSG00000137404.10 30659197 0.71 0.72 6348 45260
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 18791
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 16479
Expression level of Genes
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miRNAs possibly regulated by vista51523[chr6:30604064-30604457]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results