EnhancerDB
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  3. vista51529[chr6:30717441-30717627]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51529[chr6:30717441-30717627]
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Tissue distribution of vista51529
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Transcription factor that possibly regulate vista51529[chr6:30717441-30717627]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539495
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539496
chr6 30717429 30717444 FOXA1 JASPAR yes 70343819
chr6 30717429 30717444 FOXA1 JASPAR yes 101043942
chr6 30717433 30717444 FOXA1 JASPAR yes 70343820
chr6 30717433 30717444 FOXA1 JASPAR yes 101043943
chr6 30717438 30717452 TCF7L2 JASPAR yes 70343821
chr6 30717438 30717452 TCF7L2 JASPAR yes 101043944
chr6 30717442 30717448 TCF1 TRANSFAC yes 70343822
chr6 30717442 30717448 TCF1 TRANSFAC yes 101043945
chr6 30717443 30717457 SPIC JASPAR yes 70343823
chr6 30717443 30717457 SPIC JASPAR yes 101043946
chr6 30717457 30717476 PAX5 JASPAR yes 70343824
chr6 30717457 30717476 PAX5 JASPAR yes 101043947
chr6 30717458 30717472 PLAG1 JASPAR yes 70343825
chr6 30717458 30717472 PLAG1 JASPAR yes 101043948
chr6 30717459 30717463 LFA1 TRANSFAC yes 70343826
chr6 30717459 30717463 LFA1 TRANSFAC yes 101043949
chr6 30717466 30717475 ZEB1 JASPAR yes 70343827
chr6 30717466 30717475 ZEB1 JASPAR yes 101043950
chr6 30717467 30717475 TBX5 JASPAR yes 70343828
chr6 30717467 30717475 TBX5 JASPAR yes 101043951
chr6 30717469 30717483 PLAG1 JASPAR yes 70343829
chr6 30717469 30717483 PLAG1 JASPAR yes 101043952
chr6 30717475 30717485 SREBF2 JASPAR yes 70343830
chr6 30717475 30717485 SREBF2 JASPAR yes 101043953
chr6 30717475 30717486 USF1 JASPAR yes 70343831
chr6 30717475 30717486 USF2 JASPAR yes 70343832
chr6 30717475 30717486 USF1 JASPAR yes 101043954
chr6 30717475 30717486 USF2 JASPAR yes 101043955
chr6 30717492 30717498 JUN TRANSFAC yes 70343833
chr6 30717492 30717498 JUN TRANSFAC yes 101043956
chr6 30717500 30717509 SOX9 JASPAR yes 70343834
chr6 30717500 30717509 SOX9 JASPAR yes 101043957
chr6 30717502 30717518 SOX8 JASPAR yes 70343835
chr6 30717502 30717518 SOX8 JASPAR yes 101043958
chr6 30717517 30717535 IRF2 JASPAR yes 70343836
chr6 30717517 30717535 IRF2 JASPAR yes 101043959
chr6 30717565 30717579 JUN JASPAR yes 70343837
chr6 30717565 30717579 JUN JASPAR yes 101043960
chr6 30717566 30717579 SMAD2 JASPAR yes 70343838
chr6 30717566 30717579 SMAD2 JASPAR yes 101043961
chr6 30717568 30717579 FOSL2 JASPAR yes 70343839
chr6 30717568 30717579 JUNB JASPAR yes 70343840
chr6 30717568 30717579 FOSL2 JASPAR yes 101043962
chr6 30717568 30717579 JUNB JASPAR yes 101043963
chr6 30717569 30717580 FOS JASPAR yes 70343841
chr6 30717569 30717580 FOSL1 JASPAR yes 70343842
chr6 30717569 30717580 JUND JASPAR yes 70343843
chr6 30717569 30717580 FOS JASPAR yes 101043964
chr6 30717569 30717580 FOSL1 JASPAR yes 101043965
chr6 30717569 30717580 JUND JASPAR yes 101043966
chr6 30717571 30717578 JUN TRANSFAC yes 70343844
chr6 30717571 30717578 JUN TRANSFAC yes 101043967
chr6 30717582 30717593 NFE2L2 JASPAR yes 70343845
chr6 30717582 30717593 NFE2L2 JASPAR yes 101043968
chr6 30717587 30717596 ZEB1 JASPAR yes 70343846
chr6 30717587 30717596 ZEB1 JASPAR yes 101043969
chr6 30717590 30717595 USF2 TRANSFAC yes 70343847
chr6 30717590 30717595 USF2 TRANSFAC yes 101043970
chr6 30717605 30717616 NRL JASPAR yes 70343848
chr6 30717605 30717616 NRL JASPAR yes 101043971
chr6 30717611 30717626 RUNX2 JASPAR yes 70343849
chr6 30717611 30717626 RUNX2 JASPAR yes 101043972
SNP sites on vista51529[chr6:30717441-30717627]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30717544 rs544954778 G A
POLR2A
8948392
chr6 30717619 rs560210684 C T
POLR2A RUNX2
8948393
Genes possibly regulated by vista51529[chr6:30717441-30717627]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30620896 30640814 - DHX16 ENSG00000204560.5 30640814 0.59 0.74 6346 23373
chr6 30644166 30655672 - PPP1R18 ENSG00000146112.7 30655672 0.75 0.78 6347 38231
chr6 30655824 30659197 - NRM ENSG00000137404.10 30659197 0.71 0.72 6348 41756
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 68225
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 70537
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 93069
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 94890
Expression level of Genes
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miRNAs possibly regulated by vista51529[chr6:30717441-30717627]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results