EnhancerDB
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  3. vista51535[chr6:30727821-30727972]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51535[chr6:30727821-30727972]
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Tissue distribution of vista51535
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Transcription factor that possibly regulate vista51535[chr6:30727821-30727972]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30727827 30727840 ZBTB18 JASPAR yes 70344125
chr6 30727827 30727840 ZBTB18 JASPAR yes 101045476
chr6 30727831 30727836 MYC TRANSFAC yes 70344126
chr6 30727831 30727836 MYC TRANSFAC yes 101045477
chr6 30727881 30727891 SREBF1 JASPAR yes 70344127
chr6 30727881 30727891 SREBF2 JASPAR yes 70344128
chr6 30727881 30727891 SREBF1 JASPAR yes 101045478
chr6 30727881 30727891 SREBF2 JASPAR yes 101045479
chr6 30727881 30727894 EOMES JASPAR yes 70344129
chr6 30727881 30727894 EOMES JASPAR yes 101045480
chr6 30727882 30727890 MGA JASPAR yes 70344130
chr6 30727882 30727890 MGA JASPAR yes 101045481
chr6 30727905 30727915 SREBF1 JASPAR yes 70344131
chr6 30727905 30727915 SREBF2 JASPAR yes 70344132
chr6 30727905 30727915 SREBF1 JASPAR yes 101045482
chr6 30727905 30727915 SREBF2 JASPAR yes 101045483
chr6 30727905 30727918 EOMES JASPAR yes 70344133
chr6 30727905 30727918 EOMES JASPAR yes 101045484
chr6 30727906 30727914 MGA JASPAR yes 70344134
chr6 30727906 30727914 MGA JASPAR yes 101045485
chr6 30727929 30727939 SREBF1 JASPAR yes 70344135
chr6 30727929 30727939 SREBF1 JASPAR yes 101045486
chr6 30727960 30727977 PAX1 JASPAR yes 70344136
chr6 30727960 30727977 PAX9 JASPAR yes 70344137
chr6 30727960 30727977 PAX1 JASPAR yes 101045487
chr6 30727960 30727977 PAX9 JASPAR yes 101045488
chr6 30727961 30727980 PAX5 JASPAR yes 70344138
chr6 30727961 30727980 PAX5 JASPAR yes 101045489
SNP sites on vista51535[chr6:30727821-30727972]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30727824 rs547076082 T G no 8948554
chr6 30727852 rs113527809 A G no 8948555
chr6 30727888 rs9262170 T C
EOMES MGA SREBF1 SREBF2
8948556
chr6 30727932 rs73432777 C G,T
SREBF1
8948557
chr6 30727962 rs112784999 G A
PAX1 PAX5 PAX9
8948558
Genes possibly regulated by vista51535[chr6:30727821-30727972]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30620896 30640814 - DHX16 ENSG00000204560.5 30640814 0.59 0.74 6346 12993
chr6 30644166 30655672 - PPP1R18 ENSG00000146112.7 30655672 0.75 0.78 6347 27851
chr6 30655824 30659197 - NRM ENSG00000137404.10 30659197 0.71 0.72 6348 31376
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 57845
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 60157
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 82689
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 84510
Expression level of Genes
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miRNAs possibly regulated by vista51535[chr6:30727821-30727972]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results